KEGG   Scophthalmus maximus (turbot): 118287144
Entry
118287144         CDS       T09850                                 
Name
(RefSeq) integrin alpha-M isoform X1
  KO
K06461  integrin alpha M
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04145  Phagosome
smau04514  Cell adhesion molecules
smau04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118287144
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118287144
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118287144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118287144
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118287144
   04515 Cell adhesion molecules [BR:smau04515]
    118287144
   04090 CD molecules [BR:smau04090]
    118287144
   00536 Glycosaminoglycan binding proteins [BR:smau00536]
    118287144
Membrane trafficking [BR:smau04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118287144
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118287144
Cell adhesion molecules [BR:smau04515]
 Integrins
  Integrin alpha subunits
   118287144
CD molecules [BR:smau04090]
 Proteins
  118287144
Glycosaminoglycan binding proteins [BR:smau00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   118287144
SSDB
Motif
Pfam: VWA ITGAX-like_Ig_3 FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 Copine
Other DBs
NCBI-GeneID: 118287144
NCBI-ProteinID: XP_035467882
UniProt: A0A2U9CN97
LinkDB
Position
16:complement(11833034..11846662)
AA seq 1143 aa
MDWMITASVLLSVLKTALCFNIDPVAWKSWSNDAAGFGYQVVQRPSDVLVSAPLAQYSQN
RRGEIYKCSGTIKSCQKMQIQVPEFAVNMSLGLTMTSDPVTQSTMACGPTIPKDCKSITM
YNGACFQTSRSDIFQSVVPLAPQECRTEADIAFLLDGSGSVIKRDFTIMKNFVKKMVRPF
VGKDTQFAVVQFSRLTKVHYYFNNFFSSGRWESNIDGIIQEEETTYTASAIEYVVQNVFT
SARGSRPNVKKILIVITDGISHDRNRLPNAADLAKRKQIVRFAIGVGNAFHNYDAKQELN
QIASSPSEKHVFQVESFNALEAIRKNLEEKIFSIEGSQSSGDSLKMEMAQQGFSAAYVHG
GIQMGIVGANQWKGGFTKYTLADRMLSSYEPEFMEQDSYLGYSMAVATTPQGTLTIVGAP
RYKHIGAVLTVRADRIHKIIDPFLWHFQTGEYFGAEVCAMDVNGDSYTDLILISAPMYKE
TDSEGRVYVCSLTRLNVECHLDSPLVLRGDASDNGRFGSSLAVLPDLNTDRLREVAVGAP
LENDGQGCIYIFHGEGGGRISASYSQRIAGAEVQSGLKLFGVSISQLSFDHSGDNLPDLA
VGSNGTVVLLRSKPIVMVDATVSFSPNQIPTQNIVCSVPLENMAEICFTMKAPSSVHTAQ
ARIDYTLILDATRKVPNNRAYISDKQRETTGSIDIQLGRQQCRKVKFSIEACPEDALNAL
NNELRFAFDGKPSKKNLKPSLAQQAKTTTFHALGFEINCGTDNKCVDNLKVDFNFSRSSE
VQVGIDELLNVTVSVQNSEENSYNSQVILTYPAGLSYRKFTSLQGRIECSSLDSEDGLLR
GKTLCAINKPIFKSNMEAFFIVSYGIDTNRHFERTISVTANATSGNQDHSSSSEFYKRKL
IDVKYSIFITIESSLSYSNFTFGKNNLQKPYQQSIVVTNDIRALNFSVVIKVPVKLGDKD
IWADLSSLQIPNCQQLDTDERVNVTDFVSLIQKNKVVDCNVASCRVFKCSRFMGRLESKT
YKISANLSSGWIEQIGLPSAKFLLTSSASLEYDTNQYIFFSAGSNNKPPIRMIETVIEVY
PEPDFTKEIVGGSLGGLALLALLTAGLYKAGFFKSKYNEMINEAGGGADPGADGDAATPE
QLT
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggactggatgataactgcctctgtattattgtcagtgttaaaaacagcgctctgtttc
aatatcgaccctgtggcttggaagtcctggagcaacgatgctgcagggtttggctaccag
gtggtgcaaagaccgtccgacgtgcttgtcagtgctccccttgcacaatattcacaaaat
agaaggggggaaatatacaaatgctctggtaccataaaatcctgccaaaaaatgcaaatt
caagtgccagagtttgcagtcaacatgtcccttggtctgacaatgacgagtgaccctgtc
acacaaagcactatggcttgtggaccgaccatcccaaaggattgcaaaagtatcaccatg
tacaacggtgcatgctttcagacaagccgctctgatatttttcaatccgttgtgcctttg
gctccccaagagtgcagaaccgaagcagatattgcttttctcttggatggttcaggtagc
gtgatcaaaagagattttacaataatgaagaactttgtgaaaaaaatggtccgcccattt
gtgggaaaagatacacagtttgctgttgtccagttctctcggctcaccaaagtccactat
tactttaataactttttctcatctggacgatgggagtcaaacattgatgggataattcaa
gaagaagaaacaacttacacagcttcagccatcgaatatgtggtccaaaacgttttcaca
tcagcacgaggttccagaccaaatgtaaagaagatcttgatagtcatcactgatggaata
tctcatgaccgcaatcgattgccaaatgcagcagacttagcaaaacgtaaacaaattgtt
cgatttgctattggggtgggaaatgcgttccataattatgatgcaaaacaggaactgaat
caaattgcttcttctccctcggaaaaacatgtgtttcaagtggagagctttaacgccctt
gaagcaataaggaagaatttggaggaaaaaatcttttctattgaaggatcgcaatccagt
ggagattctctgaaaatggaaatggctcaacagggattcagtgctgcttatgtgcatggg
ggaattcagatgggcattgttggtgccaaccaatggaaaggaggcttcacgaaatataca
ttagcagaccggatgttgagttcatatgagcctgaatttatggagcaagacagttatctg
ggctactccatggcagttgctacaaccccacaaggcaccttgacaattgttggtgctcca
agatacaaacacataggagctgtgttgacagtacgggcagaccgcatccacaaaattatt
gatcccttcctatggcactttcagactggcgaatattttggggcagaggtttgtgccatg
gatgtgaatggcgacagctacactgacctaatcctcatatctgcccccatgtacaaggag
actgatagcgagggaagagtttacgtttgcagtttaactcgtttgaatgtcgagtgtcac
ttggattcgccattggtactgagaggggatgcgtctgacaacggaaggtttggctcctct
cttgctgtgctgcctgatcttaacaccgacagactcagggaagtggcagttggagcgcct
ttggagaatgacggtcagggctgcatctacatattccacggcgaaggaggaggaagaatc
agtgcttcttactcccagagaattgctggtgctgaggtccagtcaggactgaagttgttt
ggtgtgtcgatcagtcagttgtcttttgaccacagtggagacaatctgcctgacttagca
gtgggttcaaacggcacagttgtcttactcagatcaaagcctatagtaatggtagacgct
acagtgtcgttcagcccaaaccagatccctactcaaaacatagtctgctcagtcccactg
gagaacatggctgaaatctgctttaccatgaaagcaccttcttcagtacacacagctcaa
gcgaggatcgattacactttaatactggatgccacccgcaaggtcccaaacaacagagct
tacatcagtgacaaacaacgggagacaaccgggtcaattgatattcagttaggacggcaa
caatgtcgcaaagtgaaattctctattgaggcctgtccggaggatgctctcaatgcactt
aacaacgagctcagatttgcctttgacggaaaaccttctaagaaaaatcttaaaccaagt
ctcgcccagcaggctaagacaacaactttccatgctttagggtttgagatcaactgtgga
actgacaacaaatgtgtagacaacctaaaagtggatttcaatttcagccgatcctcggaa
gttcaagttggcattgatgaattgctgaatgtcaccgtgtccgtgcagaacagcgaggaa
aactcctacaacagccaagtgatactcacatacccggccgggctctcctacaggaagttc
acgagtctgcagggaagaattgagtgcagctccttggacagtgaagatggattattacgg
ggaaagacactctgtgctattaacaagcctattttcaagagcaacatggaggctttcttc
attgtctcctatgggatcgataccaacagacattttgagaggacaatttccgtcactgca
aatgctaccagtgggaatcaggatcactcctcttcaagtgaattttacaaaaggaaattg
attgatgtgaagtacagcattttcatcacaattgaaagttccctcagctacagcaatttc
acttttggaaagaacaacttgcagaaaccataccaacaatcaattgtggttacaaatgat
attagagccctgaatttctctgtggtgatcaaggtgccagtaaagctcggtgacaaagac
atctgggcggatttgagcagtttgcagattccaaactgccaacaactagacacagatgaa
agggttaatgtcacggattttgtttctctgatacagaaaaataaagtagtggactgcaat
gtagccagttgcagagtgttcaagtgcagtaggttcatgggaagactggagagtaaaacg
tacaaaatctctgccaaccttagttcagggtggatagagcaaattggacttccctccgcc
aaattcctgttgaccagctcggccagtctggagtacgacaccaaccagtacatcttcttt
tcagcagggtccaataacaagcctcctattcgcatgattgaaacagtgatagaagtgtat
ccagaaccagacttcacaaaagagatcgtcggaggatcactgggagggttggctctactg
gctctactcactgctggcctgtataaggctggatttttcaagagtaaatacaacgaaatg
attaatgaagcaggaggaggagcagatccaggcgctgatggagatgcagccacaccagaa
caactaacatga

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