Scophthalmus maximus (turbot): 118287144
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Entry
118287144 CDS
T09850
Name
(RefSeq) integrin alpha-M isoform X1
KO
K06461
integrin alpha M
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04145
Phagosome
smau04514
Cell adhesion molecules
smau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118287144
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118287144
09142 Cell motility
04810 Regulation of actin cytoskeleton
118287144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118287144
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118287144
04515 Cell adhesion molecules [BR:
smau04515
]
118287144
04090 CD molecules [BR:
smau04090
]
118287144
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118287144
Membrane trafficking [BR:
smau04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118287144
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118287144
Cell adhesion molecules [BR:
smau04515
]
Integrins
Integrin alpha subunits
118287144
CD molecules [BR:
smau04090
]
Proteins
118287144
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118287144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Copine
Motif
Other DBs
NCBI-GeneID:
118287144
NCBI-ProteinID:
XP_035467882
UniProt:
A0A2U9CN97
LinkDB
All DBs
Position
16:complement(11833034..11846662)
Genome browser
AA seq
1143 aa
AA seq
DB search
MDWMITASVLLSVLKTALCFNIDPVAWKSWSNDAAGFGYQVVQRPSDVLVSAPLAQYSQN
RRGEIYKCSGTIKSCQKMQIQVPEFAVNMSLGLTMTSDPVTQSTMACGPTIPKDCKSITM
YNGACFQTSRSDIFQSVVPLAPQECRTEADIAFLLDGSGSVIKRDFTIMKNFVKKMVRPF
VGKDTQFAVVQFSRLTKVHYYFNNFFSSGRWESNIDGIIQEEETTYTASAIEYVVQNVFT
SARGSRPNVKKILIVITDGISHDRNRLPNAADLAKRKQIVRFAIGVGNAFHNYDAKQELN
QIASSPSEKHVFQVESFNALEAIRKNLEEKIFSIEGSQSSGDSLKMEMAQQGFSAAYVHG
GIQMGIVGANQWKGGFTKYTLADRMLSSYEPEFMEQDSYLGYSMAVATTPQGTLTIVGAP
RYKHIGAVLTVRADRIHKIIDPFLWHFQTGEYFGAEVCAMDVNGDSYTDLILISAPMYKE
TDSEGRVYVCSLTRLNVECHLDSPLVLRGDASDNGRFGSSLAVLPDLNTDRLREVAVGAP
LENDGQGCIYIFHGEGGGRISASYSQRIAGAEVQSGLKLFGVSISQLSFDHSGDNLPDLA
VGSNGTVVLLRSKPIVMVDATVSFSPNQIPTQNIVCSVPLENMAEICFTMKAPSSVHTAQ
ARIDYTLILDATRKVPNNRAYISDKQRETTGSIDIQLGRQQCRKVKFSIEACPEDALNAL
NNELRFAFDGKPSKKNLKPSLAQQAKTTTFHALGFEINCGTDNKCVDNLKVDFNFSRSSE
VQVGIDELLNVTVSVQNSEENSYNSQVILTYPAGLSYRKFTSLQGRIECSSLDSEDGLLR
GKTLCAINKPIFKSNMEAFFIVSYGIDTNRHFERTISVTANATSGNQDHSSSSEFYKRKL
IDVKYSIFITIESSLSYSNFTFGKNNLQKPYQQSIVVTNDIRALNFSVVIKVPVKLGDKD
IWADLSSLQIPNCQQLDTDERVNVTDFVSLIQKNKVVDCNVASCRVFKCSRFMGRLESKT
YKISANLSSGWIEQIGLPSAKFLLTSSASLEYDTNQYIFFSAGSNNKPPIRMIETVIEVY
PEPDFTKEIVGGSLGGLALLALLTAGLYKAGFFKSKYNEMINEAGGGADPGADGDAATPE
QLT
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggactggatgataactgcctctgtattattgtcagtgttaaaaacagcgctctgtttc
aatatcgaccctgtggcttggaagtcctggagcaacgatgctgcagggtttggctaccag
gtggtgcaaagaccgtccgacgtgcttgtcagtgctccccttgcacaatattcacaaaat
agaaggggggaaatatacaaatgctctggtaccataaaatcctgccaaaaaatgcaaatt
caagtgccagagtttgcagtcaacatgtcccttggtctgacaatgacgagtgaccctgtc
acacaaagcactatggcttgtggaccgaccatcccaaaggattgcaaaagtatcaccatg
tacaacggtgcatgctttcagacaagccgctctgatatttttcaatccgttgtgcctttg
gctccccaagagtgcagaaccgaagcagatattgcttttctcttggatggttcaggtagc
gtgatcaaaagagattttacaataatgaagaactttgtgaaaaaaatggtccgcccattt
gtgggaaaagatacacagtttgctgttgtccagttctctcggctcaccaaagtccactat
tactttaataactttttctcatctggacgatgggagtcaaacattgatgggataattcaa
gaagaagaaacaacttacacagcttcagccatcgaatatgtggtccaaaacgttttcaca
tcagcacgaggttccagaccaaatgtaaagaagatcttgatagtcatcactgatggaata
tctcatgaccgcaatcgattgccaaatgcagcagacttagcaaaacgtaaacaaattgtt
cgatttgctattggggtgggaaatgcgttccataattatgatgcaaaacaggaactgaat
caaattgcttcttctccctcggaaaaacatgtgtttcaagtggagagctttaacgccctt
gaagcaataaggaagaatttggaggaaaaaatcttttctattgaaggatcgcaatccagt
ggagattctctgaaaatggaaatggctcaacagggattcagtgctgcttatgtgcatggg
ggaattcagatgggcattgttggtgccaaccaatggaaaggaggcttcacgaaatataca
ttagcagaccggatgttgagttcatatgagcctgaatttatggagcaagacagttatctg
ggctactccatggcagttgctacaaccccacaaggcaccttgacaattgttggtgctcca
agatacaaacacataggagctgtgttgacagtacgggcagaccgcatccacaaaattatt
gatcccttcctatggcactttcagactggcgaatattttggggcagaggtttgtgccatg
gatgtgaatggcgacagctacactgacctaatcctcatatctgcccccatgtacaaggag
actgatagcgagggaagagtttacgtttgcagtttaactcgtttgaatgtcgagtgtcac
ttggattcgccattggtactgagaggggatgcgtctgacaacggaaggtttggctcctct
cttgctgtgctgcctgatcttaacaccgacagactcagggaagtggcagttggagcgcct
ttggagaatgacggtcagggctgcatctacatattccacggcgaaggaggaggaagaatc
agtgcttcttactcccagagaattgctggtgctgaggtccagtcaggactgaagttgttt
ggtgtgtcgatcagtcagttgtcttttgaccacagtggagacaatctgcctgacttagca
gtgggttcaaacggcacagttgtcttactcagatcaaagcctatagtaatggtagacgct
acagtgtcgttcagcccaaaccagatccctactcaaaacatagtctgctcagtcccactg
gagaacatggctgaaatctgctttaccatgaaagcaccttcttcagtacacacagctcaa
gcgaggatcgattacactttaatactggatgccacccgcaaggtcccaaacaacagagct
tacatcagtgacaaacaacgggagacaaccgggtcaattgatattcagttaggacggcaa
caatgtcgcaaagtgaaattctctattgaggcctgtccggaggatgctctcaatgcactt
aacaacgagctcagatttgcctttgacggaaaaccttctaagaaaaatcttaaaccaagt
ctcgcccagcaggctaagacaacaactttccatgctttagggtttgagatcaactgtgga
actgacaacaaatgtgtagacaacctaaaagtggatttcaatttcagccgatcctcggaa
gttcaagttggcattgatgaattgctgaatgtcaccgtgtccgtgcagaacagcgaggaa
aactcctacaacagccaagtgatactcacatacccggccgggctctcctacaggaagttc
acgagtctgcagggaagaattgagtgcagctccttggacagtgaagatggattattacgg
ggaaagacactctgtgctattaacaagcctattttcaagagcaacatggaggctttcttc
attgtctcctatgggatcgataccaacagacattttgagaggacaatttccgtcactgca
aatgctaccagtgggaatcaggatcactcctcttcaagtgaattttacaaaaggaaattg
attgatgtgaagtacagcattttcatcacaattgaaagttccctcagctacagcaatttc
acttttggaaagaacaacttgcagaaaccataccaacaatcaattgtggttacaaatgat
attagagccctgaatttctctgtggtgatcaaggtgccagtaaagctcggtgacaaagac
atctgggcggatttgagcagtttgcagattccaaactgccaacaactagacacagatgaa
agggttaatgtcacggattttgtttctctgatacagaaaaataaagtagtggactgcaat
gtagccagttgcagagtgttcaagtgcagtaggttcatgggaagactggagagtaaaacg
tacaaaatctctgccaaccttagttcagggtggatagagcaaattggacttccctccgcc
aaattcctgttgaccagctcggccagtctggagtacgacaccaaccagtacatcttcttt
tcagcagggtccaataacaagcctcctattcgcatgattgaaacagtgatagaagtgtat
ccagaaccagacttcacaaaagagatcgtcggaggatcactgggagggttggctctactg
gctctactcactgctggcctgtataaggctggatttttcaagagtaaatacaacgaaatg
attaatgaagcaggaggaggagcagatccaggcgctgatggagatgcagccacaccagaa
caactaacatga
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integrated database retrieval system