Scophthalmus maximus (turbot): 118287157
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Entry
118287157 CDS
T09850
Name
(RefSeq) multiple PDZ domain protein isoform X2
KO
K06095
multiple PDZ domain protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04517
IgSF CAM signaling
smau04519
Cadherin signaling
smau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118287157
04519 Cadherin signaling
118287157
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118287157
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Ortholog
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
T15H9-4_C
L27_1
Motif
Other DBs
NCBI-GeneID:
118287157
NCBI-ProteinID:
XP_035467925
LinkDB
All DBs
Position
12:complement(2892827..2932779)
Genome browser
AA seq
2044 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPAEEKLSLLKSVLQSPLFHQILALQKSVQHVRD
QGSVLTSRGSDPVDPITAVKPNGGHVSYSDVPASTHINGQTSSEEFEHTIQSMAQGRYVN
HVELQKPVSGGLGFSVVGLKSENRGELGIFIQEIQLGSVAHCDGKLKEADQILAINGQPL
DQTVTHQQAIGILQSASERVQLTVARGPIPQLASPVVSRTPSAASTLSANSSALQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLHGMGSEQV
AQVLRQCGNRVKLVVTRGPVEENPSAVMPVVLPTVNEQQGCEDEDTEAFDVSLTKNTQGL
GITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRVHVGDQIIAVDSVNIQGYTNQQAVEV
LRHTGQTVHLKLIRRGFRPEETPPAVTPSVIILPSSTTIPTTTIALKELELVRIKPEEAA
LVTTDEKLLQTKSEGSDVNPAMDPLTEDRHVMKLTLFEEEQLMKKWQEILGPSNEVIVAQ
VEKFTEKSGLGINLEANSGHHYIRSVLPEGPVGRCGKLFNGDELLEVNGKALIGETHKEV
VRILKELPLCAHVTCCRPAPHLQTDMDDVQAEPEAFSLPSKLKKQIDLSSVRVAEDSEVN
RAAAKQDNVTEEAIGSPLAMWELEIQNIELVKGEGGLGFSILDYQDPMDSAKTVIVIRSL
VPNGVAEQDGRLLPGDRLMYVNTTNLENASLEDAVQALKGALLGNVQIGVAKPLPGICGY
SHSPHSYGEQEITSSSTIHSFDFNSILVEEGEEEDLAEGIVYRAEPALIDTSEADLPDEK
VFDHSFSGIEDDTFQASMIALHGSGCGADLDYLQSSTPKLTARLLDECPSFTTLSDLGDD
DRAFSPEKSAPFTPPSFSGPVPAYNAALGSSDQYLARHVTKEEPAERSNSYSPFAEIGTR
SNVQEEPVKSSHYQKEPPISFGDIMMLMKDEEAWVKEAAEDGDKEALTSGSNFERTITVV
KGNSSLGMTVSAMKDGLGMLIRSIIHGGSISRDGRLGVGDLILAINGEPTANLTNAQARA
MLRRHSLIGPDLGSSCSPEDDLCPFYVITYVPAEYLEEYKTSLEQAKDDVFSGAAPLPDT
APKDIPNLPEREDGEGEESASYNNWNQPRKVELFREPGKSLGISIVGGRGMGSRLSNGEV
MRGIFIKHILADSPAGHNGTLKTGDRIVEVDGADLRDASHEEAVEAIRRAGNPVSFLVQS
IIHRPRSLIPDSGEERAAAVTGDKDKEGDSHSRLFLRLSPTNPFTPTPFKPAKREAAKAS
PTSAVLPLPVLPHVGETDTDTLTENPGRPAEAEEVNQEEEEEEEEEFGYNWKNLIQRYGS
LPGDLHMIELEKGKAGLGLSLAGNRDRSRMSVFVVGIDPNGAAGRDGRMVVGDELLEING
QVLYGHSHQNASSIIKCSPSKVKIIFVRNTEALNQMAVGPVRDRGGDTVEPHAELETAAA
NGDADASKYVHHIVELKEDEGLGITFVEGNTESGDEIQTVSEEHTGKSTCQDWVCSDGDV
ASLPSMPSADTAMLITVEAEGVTSPSRSSTPSTLACDPATCPIIPGCETTIDISKGRTGL
GLSIVGGCDTLLGAIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLRAASHDEAINVLRQ
TPHRVRLVVYRDEAQYKEEDLWDSFTVELHKMPGQGLGLSIVGRRNDTGVFVSDIVKGGL
VDTDGRLTQGDQILSVNGEDLRSATQEAVAALLKCCVGPIKMEVGRFKAGPFHSERRLSQ
SSQMSETGCSKVASQSCSDSGNLPGDPDKISQESPEHQDTRTVEFTKGPNDSLGISIAGG
VGSPLGDIPIFIAMMNPVGVAAQTQKLKIGDRLVSICGNSAEGMSHSQAVALLKNATGTI
QLQVVAGGDTTVTGPSQDQAAGGLTPSSIFQDDIGPPQYKSITLDRGPDGLGFSIVGGHG
SPHGDLPIYVKTVFGKGAAAEDGRLKRGDQIMAVNGQTLEGVTHEEAVGILKRTKGTVTL
TVLS
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaatggatacacagcgtgccttgcaggcggtggagcgtctccaggccaaa
ctgaaggagcgaggagaggtgcccgccgaggagaagctcagcctgctcaaatcagtgctc
cagagcccgctcttccaccagatcctggccttgcagaaatctgtccagcatgtcagagac
caggggagtgtcctgacgtcgcgtgggagtgaccctgtcgatcccatcacagctgtgaag
cccaatggaggccatgtttcctattcagatgtacctgcttctacacacattaatggacag
acgtcgtctgaagaatttgagcacaccattcagtccatggcacaggggcgctacgtgaat
catgtggagctgcagaagccagtgtcaggaggtctgggcttcagcgtggtgggtctgaag
agcgagaaccgcggagagctaggcatattcatccaggaaattcaactgggaagcgtggct
cactgtgatggaaagctcaaagaagcggaccagatcttggccatcaatggccagcccctg
gaccagacggtgacccaccagcaggctataggcatcctacagagcgcttcagagagggtg
cagctcacagtggcccgaggaccaatacctcagctggccagtcctgtggtttcccgcaca
ccctctgctgccagtacactgtcggccaactctagtgcgttgcagcatgtggagacaatt
gagctggtcaacgacggcactggcctcggattcggtattgtgggaggcaagaccactggc
gttattgtcaaaaccatccttcctggaggcatagctgatcaggatggccgcctgcggagt
ggggaccacatcctgagaatcggagacaccgacctgcacggcatgggcagtgaacaggtg
gcccaggtcctcaggcaatgcggcaacagagtgaagctggtggtcaccaggggtcccgtg
gaggagaatccctctgctgtcatgcccgtggtgctccccactgtcaacgaacagcagggc
tgtgaggacgaggacactgaagcgtttgacgtgagcctgacaaagaacacccagggacta
gggattactattgctggctatgttggagataaaaattcagagccctctggtatttttgtt
aagagtataacaaaagacagcgccgtagagcaagatggccgtgttcatgttggagaccag
ataatagctgtcgatagtgtaaacatacagggatacaccaaccaacaggctgtggaggtg
ctcagacacaccggccagacagtccaccttaagctgatccgccgcggcttcaggcctgaa
gagaccccgcccgctgtgacccccagtgtcatcatcctgccctcatccaccaccatcccc
accaccaccatcgccctgaaggagcttgagctagtgaggattaagcctgaggaggctgca
ctagtcaccacagatgaaaagctgctccagacaaagagtgaaggatctgatgtcaacccg
gccatggatccgctaacggaagacagacatgtgatgaagttaacactctttgaagaagaa
caactaatgaagaaatggcaggagattctgggtccaagtaatgaagttatagtggctcag
gtggagaagtttaccgagaagagtggcctagggatcaatctggaagccaacagtgggcat
cactacatccgctctgttctgcctgagggacccgttggtcgctgtggcaagctgttcaat
ggagatgaactgcttgaggtcaacggcaaagccctgattggtgagacccacaaggaagtc
gtcagaatcttgaaggagcttccactctgtgcacatgtgacatgctgtagacccgcccct
cacctgcagactgacatggacgatgtccaagcagaaccagaggctttctccctaccatcc
aaattaaagaaacaaatagacctgagcagcgtacgggttgccgaagactcagaggtgaac
agagcagcggcgaagcaggataatgtgacagaggaggcaataggatctcctttggctatg
tgggagctggagatccagaatatcgagctggtgaagggagaagggggactgggattcagt
attttggactaccaggaccccatggactctgccaagacggtgatcgtgatacgttcgctt
gtccccaacggtgtggctgagcaagatggcaggctgttgccaggggacagactcatgtat
gtcaacaccaccaacctggagaacgccagtctggaggacgccgtccaggccctgaagggg
gccctgctcggcaacgtccagataggagtcgccaaaccactgcctggaatatgtggatat
tcccactctccacactcatatggtgaacaggaaataacttcatcatccaccatccactca
tttgacttcaacagtattttggttgaagaaggagaggaagaggatctggctgagggcatc
gtttaccgagcagagcctgcattgattgacaccagtgaggcggacctacctgatgaaaag
gtgttcgatcattccttttccgggatagaggacgacactttccaggcgtccatgattgcc
cttcatggtagcggctgtggcgcagacctggactacttgcagtcatccacacctaagctg
acagcccgcctgctggacgagtgccccagctttacgacgctgtccgacctcggagacgac
gatcgagcattctcgccagagaagtcggccccgttcactcctccgagtttcagtggtcct
gtcccggcttataatgccgcactcggcagttctgatcagtacctggctcgtcacgtgacc
aaagaagaaccagcggagcgctcaaactcctacagcccgtttgccgaaatagggacccga
tctaatgtacaggaggaaccggtgaagtccagccactaccagaaggagccgcccatctca
tttggagatattatgatgttgatgaaggacgaggaggcttgggtgaaagaagcagcagaa
gacggggacaaggaagcactgacctcagggagcaactttgaaaggactatcaccgttgtc
aagggcaactccagtctcggcatgacggtgagcgccatgaaagacggtttggggatgctg
atccgcagcataatccacggtgggtcaatcagccgcgatggccgtcttggtgtaggtgac
ctcatcctggccatcaacggagagcccactgccaacctgaccaacgcccaggctcgtgcc
atgctgcgaagacactccctcattggaccagacctgggatcttcttgttcccctgaggac
gatctgtgcccattttatgtcattacatatgttccagcagagtatctagaagagtacaaa
accagcctagagcaggcgaaagatgatgtcttctcaggagcagctccattgccagacaca
gctccaaaagatattcctaatctccctgagcgtgaggatggagagggagaggaaagtgcc
tcctacaacaactggaaccaaccaagaaaagtggagctgttcagagagccaggcaagtcc
ctgggcatcagcatcgtcggaggacgagggatgggcagccgcctgagcaatggagaagtg
atgagggggatttttatcaaacacatcctggcagacagtcctgctggacacaacgggacc
ctgaagacaggagacaggattgtagaggtggatggggcagacctaagagatgctagtcac
gaggaggcagtggaggctatacgccgggccggcaaccccgtctccttcttggtacaaagt
attattcacagacccaggtccctgataccagactctggtgaggaaagagctgcagctgta
acgggagacaaggacaaggagggtgacagtcacagtagacttttcctccgcctctcccca
actaaccctttcactcctaccccgtttaagccggcgaagcgtgaagcagcaaaggcatct
cccaccagcgctgtcctccccctgccagtgttgccccatgtgggagagactgatacagac
acgctgacagagaatcctggcagacctgctgaggcagaggaggtgaaccaagaggaggag
gaggaggaggaagaggagtttggatacaactggaagaacctaatccagcgctatggcagc
ctcccaggtgacctacacatgattgagctggagaaaggcaaggcaggtctgggcctcagc
ctggcagggaaccgggaccgctctcgcatgagcgtgttcgtggtgggaatagaccccaat
ggggcggccggcagggacgggcgtatggttgtgggcgatgagctgcttgagatcaatgga
caggtcctgtatggccacagtcaccagaatgcatcctccataatcaagtgctctccatca
aaagtcaaaatcatctttgtcaggaacacggaggcgctgaaccagatggctgtgggacct
gtcagagaccgcgggggagacacagtggagccccacgctgagctcgaaacagctgctgct
aatggcgacgccgatgcttcaaaatatgtccatcacattgtagagctgaaggaggacgaa
ggacttggaatcacctttgttgagggaaacactgagagtggagatgaaattcagactgta
tctgaagaacacacaggcaaatcaacctgccaggactgggtttgctcagatggagacgtc
gccagcctacccagcatgcctagcgccgacacagccatgctgattacagtagaggcagag
ggagtcactagtccgagtcgctcctccaccccttccactctggcctgtgacccagcgacc
tgtcccatcatccccggctgcgagaccaccattgatatctccaagggccgcacgggtctg
ggcctcagcatcgtgggaggctgtgacactctgctgggggccatcattatccatgaagtg
tacgaagaaggggcagcctctaaagatggcaggctgtgggcaggagaccaaatcctagag
gtgaacggtatcgacctgcgcgcagccagtcatgatgaagccatcaacgtgctgcggcag
acacctcacagggttcggttggtggtctacagggacgaggcccagtacaaggaggaggac
ctgtgggactctttcactgtggagctgcacaagatgcctggccagggcctgggtctgagc
attgtggggaggaggaatgacactggagtgttcgtgtctgatattgtgaaagggggtttg
gtggacaccgacggccgactgacgcagggggaccagatcctgtcggtcaacggtgaggac
ctgaggtcggccactcaggaggccgtggctgcactgcttaagtgctgcgtggggcctata
aaaatggaagtggggaggttcaaagctgggcccttccactctgaaaggaggctgtctcaa
agcagtcagatgagtgaaacaggctgttccaaggtggcctctcagtcctgttcggactct
ggaaaccttcctggtgaccccgacaaaattagccaggaatctccagagcatcaggacacc
agaacagtggagttcactaaaggtcccaatgattctctgggcatcagtattgccggcggc
gtgggcagccctcttggtgacatacccatcttcatcgccatgatgaatcctgtcggcgtg
gctgctcagacccagaagctcaagattggggaccgacttgtcagtatctgcggaaactcc
gctgaaggcatgagccactcacaggctgtcgctctgctcaagaatgccacaggcacaata
cagctacaggtggtggcaggtggtgacacaactgtgacaggtccgtctcaggatcaggct
gctggaggtctcacgcccagctccatttttcaggatgacattggcccacctcagtataag
agcatcactcttgacagaggaccagacggacttggtttcagtatagtcggggggcacggg
agcccgcacggagatttgccgatctatgttaaaacagtttttggaaagggtgcagcagcg
gaggacgggcgactgaaacgaggagaccagataatggctgttaacggtcaaactctggag
ggcgtcactcatgaagaagctgttggcatcctgaaaaggaccaaaggaactgtcacgctt
actgtgctttcgtag
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