Scophthalmus maximus (turbot): 118287179
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Entry
118287179 CDS
T09850
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118287179 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118287179 (abca5)
Transporters [BR:
smau02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
118287179 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
118287179
NCBI-ProteinID:
XP_035467992
UniProt:
A0A8D3DPT2
LinkDB
All DBs
Position
16:complement(20473354..20491655)
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AA seq
1682 aa
AA seq
DB search
MYFIPEASITETSRPYVVPMRDAGSMQPACRRDAGVWHQTRSLLYKNVLIKWRTKQQSLQ
ELILPLLLLGLLILISTLNPHVYYGGISTLELERDDHVIKGLGYTPITNITSHIMEEVAH
EMLLDHLEMFASEEDLENASLYEPSSYVGVVFTDSSATSYRLRFPYNQLPLPSDYTESIA
SCFTSSVNCRAANYWYSGFIRLQSLIDAAIIQMQTKRPVRSEMNLRAVMMGQPGSVEVQK
FPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTAFWLSWGLLYAALVT
TMSFLMSIIATYTALFPNSDFFVIFSLIFLYGISSIFFSFMLTPLFKKPKFASTVGSMLT
VVFGCLSLFTVLMEDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLANGPHP
LYVPLIMLVLDCVLYLLLAVYLDQVLPGEFGMRRSLVYFLKPSYWSKRSKRYVEVSSVYD
AEVNGAPGGNESVEPVSPEFRGKEAIRINNIHKVYKEKDSVVEALRGLTFDIYEGQITAL
LGHSGAGKSTLMNILCGICPPTGGSATIYGSPVAEVADGSEMKQLVGICPQFNIIFDVLT
VEEHLRIFAAVKGIRPADIDAEVTKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAILGD
PKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHFMDEADILADRKAVISQGQLK
CVGSSMYLKIKCGVGYHLRMSINERCEADDITSLVKQHVPKAKLSQQHEAELTFTLPFES
MDTFSGLFSELDCQPNLGVVNYGVSMTTLEDVFLRLEAEAEVDQADYSVFNREQAEDEGD
TASLDDTDQRLLTFPDNKSDVVSGHALWRQQFSTVAWLHMLNMQRERKAFVYTLALFLVF
VAAVLFLSLATGNIQIHSPDRQFLPVYLLKRNQAPRRYTTSLLVQNSSDSDISDFVRNLE
SQDIKVEMMKHGDYMAAAPHSAAINVTGSSKGFRYSVAFNSTTVHSLPMAVNVLSNALLR
GLNGTRRIRTWTKPFDHQIPDAMSYTLVYIESIILGMLAAGMPAYFAMDHTRDREIKCRS
TLRISGLVPSAYWCGQAAVDIPFFYLILSCMTVILFSFHTGSLLTSSNLTAVVLCVIGFG
PAMILFTYVFSFAFARVQSNRDFFSVISMMVCVVSASLVQLSYVNDNLGLTRNLHNILCF
FNPLYPLMGCLKCITKATFLPSLYEENFLWKNLLIAVIAPYLQIILLLFLLRWLEIRYGG
RTMKNDQFCRISSKSKPRAEKNPDEGLNEDEDVRMEKARVKEALNCQSCEEKPAVVVSNL
RKQYKGRREGFSLNKSRRVATKNVSFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTDPTAG
QVLMGDYSTEFRPVDNPLEHVGYCPQVNPLWPRVTLQEHLEIYAAVKGLRGQDVPGIIKR
VVNALELKEHVNKQAKNLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWRAI
RAAFKNRQRGAVLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGCGYSLEVKLR
EELTGLQQAALLHKEILRIFPHAARQESFATLMVYKIPMDDVKSLATSFSQLESAKQTFN
FEEYNFSQSTLEQVFMEFAKEQEKDEDELSSLSTTFQWQRLRQDGGSGSAAANHTDSIVH
QL
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcattccggaggccagcatcacggagacttctcgtccgtacgtcgttccgatg
agggatgctgggagtatgcagcccgcgtgcagaagagacgccggagtctggcaccagacg
agaagcctcctctacaagaatgtgctcatcaagtggaggaccaaacaacagagtcttcag
gagctgatcttacctctgctgctgctaggtctcctgatactcatcagtaccctgaatcct
cacgtgtactacggaggcatcagcacgctggagctggagcgggatgaccacgtcatcaag
ggcctgggctacacgccgatcaccaacatcaccagccacatcatggaggaagtggcccat
gagatgcttctggatcatctggagatgtttgccagcgaggaggacctggagaacgccagt
ctgtacgagccctcgagctacgtcggcgtcgtgttcactgacagctccgccacatcgtac
agactgcgcttcccgtacaaccagctgcccctgcccagcgattacacagaatctatcgcc
agctgcttcaccagctccgtgaactgcagagcagctaattactggtactccggcttcatc
cgcctccagtctctgatcgacgccgccatcatccagatgcagacgaagcggccggtgcgg
agtgagatgaacctgcgggcggtaatgatgggccagcctggttctgtggaggtgcagaag
ttcccccatgccctcatctccatatacctggtcctggcattcacgcccttcgtcactttc
cttatcgtcaacgtggcggcggagaaggagcaccgtctcaaagacaccatgaccatgatg
ggactgtacgacacggccttctggttgtcgtggggcctcctgtacgctgccctggtgacc
accatgtcctttctgatgtccatcatcgccacatacacggcgctgttccccaacagtgac
ttctttgtcattttctccctcatcttcttgtacgggatatcgtctatctttttctccttc
atgctgacgccattattcaagaagcccaagttcgccagcaccgtgggctccatgctgacc
gtggtgttcggctgcctgtcgctcttcaccgtgctgatggaggacttccctcagccgctg
gtctggctcctctgcctgctctcccccagtgccttctccatcgggatcgcacaggtggtt
tacctggaggctcagggagacggtgccgtgttttcctccttggccaacgggcctcatcct
ctgtacgtgcccctgatcatgctggttctggactgcgtcctctatctcctattggccgtc
tacctggaccaggtccttcctggtgagtttggaatgaggaggtccttggtgtacttcctt
aaaccgtcctattggtccaaacgctcaaagcgctacgttgaagtgagctcggtgtacgac
gcggaggtgaacggcgcccccggcggcaatgagtctgtcgagcctgtttcaccggagttc
agaggaaaagaagccattcgcatcaataacatccataaagtgtacaaggagaaggacagc
gtggtggaggctctgagaggtctgacgttcgacatctacgagggccagatcacggctctg
ctgggccacagcggtgctggaaagtccacgcttatgaacatcctgtgcggcatctgtccg
cccactggcggctcggccaccatctacggctcccccgtggcggaggtcgccgacgggtcg
gagatgaagcagctggtgggaatctgcccccagttcaacatcatcttcgacgtgctgacc
gtggaggagcatctgaggatcttcgccgccgtcaaaggaatccgtccggcggacatcgat
gcagaggtcaccaaagtgctgaaggatctcgacttggaaaagatcatgacggctcaggcc
aagaatctcagtggaggccaaaagaggaagttgtccgtgggcatcgccatcctcggagat
cccaagatcctgctcctggacgagcccacggccggcatggacccatgctccagacatcag
gtgtggtcgctgctgaagagccgcagagctggcagagtcaccgtgctgagcacacacttc
atggacgaggccgacatcctcgccgatcgcaaagctgtgatctctcaagggcaactgaaa
tgtgtcggctcatccatgtatctcaagatcaagtgtggtgttggatatcatctcagaatg
tctatcaatgagcgatgtgaagctgacgatatcacgtcattggtcaagcagcacgttccc
aaggcaaagttgtcacagcaacatgaagcagagttgactttcacgcttccctttgagagc
atggacacattttcagggttgttctctgagctcgactgtcaacccaacctgggagttgtc
aactatggggtttccatgacaaccctggaggatgtttttcttcgtttggaggcagaggcg
gaagttgaccaagctgactacagcgtgttcaatcgggagcaggcggaggacgaaggtgac
actgcctccctggacgacacagaccagcggctgctcacgttcccggacaacaagtcggac
gtggtgtcgggtcacgctctgtggcggcagcagttcagcaccgtcgcctggctgcacatg
ctcaacatgcagcgagagaggaaggcctttgtctacactctggccttgttcctggtgttc
gttgccgccgtgctcttcctgtctctggccactggaaacatccagattcactcaccggat
cgtcagtttctgcccgtttacctcctcaagaggaaccaggctccccggagatacaccacc
agcctcctggttcagaactcctcagattcggacatttctgacttcgtccgcaacctggag
tcgcaggacataaaagtggaaatgatgaaacacggcgactacatggccgcagctccgcac
agcgccgccatcaacgtgaccggatccagcaagggtttcagatacagcgttgcgttcaac
agcaccaccgtccactcactgccgatggcggtcaacgtgctgagcaacgctctcctccga
ggcctgaacggaaccagacgcatccgaacgtggaccaagccgttcgatcaccaaatccca
gacgcgatgtcctacactctggtttacatcgagtccatcatactgggaatgctggcggct
ggaatgcccgcgtatttcgcgatggaccacactcgagaccgagagatcaagtgtcgctct
acgctgcggatctctggtctggtgccttcagcctactggtgcggccaggcggcggtggac
atccccttcttctacctcatcctgtcctgcatgaccgtcatcctcttctccttccacacc
gggagcctgctcacctccagcaacctcaccgccgtggtcctgtgcgtcatcggcttcggt
ccggccatgatcctcttcacgtacgtgttttcttttgcgtttgctcgagtccagagcaac
agggatttcttctccgtcatctccatgatggtgtgtgtcgtgtcggcctcactggtccag
ttgtcgtacgtgaacgacaacctgggactgaccagaaacctgcacaacatcctgtgcttc
ttcaacccgctctacccgctcatgggctgcctcaagtgcatcaccaaggcgacgttcctc
ccttccctctacgaggagaacttcttgtggaagaacctgctcatcgcggtgatagctccg
tatctccagatcatcctgctgctgttcctgctccgctggctggagatccgctacggaggg
aggacgatgaagaacgatcagttctgcaggatctcgtccaagtcgaagcccagagcggag
aagaacccggacgaagggctgaacgaggacgaggacgttcggatggagaaggcccgagtg
aaggaggccctcaactgccagtcctgcgaggagaaacctgctgtggtggtgagtaacctg
aggaagcagtacaagggcagaagagaagggttttccctaaacaagagccggagagtggcc
acgaagaatgtctcgttctgtgttcgcaaaggtgaagttcttggactgttgggcccaaac
ggagctgggaagagcaccatcatgcacatgttgtcaggtgacaccgaccccaccgcaggc
caggtgctgatgggcgactacagcacagagttccgtcccgtggacaatcccctggagcac
gtgggctactgtcctcaggtgaaccccctgtggccacgggtcaccctgcaggagcacctg
gagatctacgccgccgtcaagggcctgagaggacaggatgtgccggggatcatcaagcgt
gtggtgaacgctctggagctgaaggagcacgtgaacaaacaagccaagaatctgtccgca
ggcctcaagaggaagctgtgcttcgccctgagtatgatcgggaatcctcagatcgtcttg
ttggacgagccgtcgtcggggatggaccccaagtccaaacagcgcatgtggagagccata
cgagctgcgttcaagaaccggcagcggggagccgtcctcaccacgcactacatggaggag
gccgaggccgtgtgcgaccgcgtcgccatcatggtgtccggccagctgagatgcatcggc
tccatccaacatttgaaagggaaatacggatgcggctacagtttggaggtgaaactccga
gaggagctgacagggctccagcaggcggcgctgctgcacaaagagatcctgcgaatcttc
cctcacgccgcccgacaggagagctttgcaactctgatggtttataagatccccatggac
gacgtgaaatcattggccacgtccttctctcagttagagagcgcaaaacaaaccttcaac
tttgaggagtacaacttctcccagtcgaccttagagcaggtgttcatggagttcgccaag
gagcaggagaaggacgaggacgagctcagctcccttagcacaacgttccagtggcagcgg
ctgcgtcaggacggcggcagcggctcggcggcggccaaccacaccgacagcatcgtgcac
cagctttga
DBGET
integrated database retrieval system
