Scophthalmus maximus (turbot): 118287325
Help
Entry
118287325 CDS
T09850
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118287325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118287325
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118287325
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118287325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
118287325
NCBI-ProteinID:
XP_035468305
LinkDB
All DBs
Position
12:complement(24369306..24377017)
Genome browser
AA seq
544 aa
AA seq
DB search
MFGANRKKFMEGGVESDYADDSSLYYSQQSMFPPHRADKDMLVSSSSSTSGQLSQLGSSL
YGPQSALGFPMRGLNSSAAPPLSRSGLNPSASQLSSHVSTPSTGTMHTPPSPSRGILPMS
RSVMNHNQQVGGPTGQTGGMGVGIGGERGVGSGGRSGGGMGSPSRSSPSIIGMPKPQQAR
QPFTINSMSGFGVNRNPGFNLNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRRDGGS
NPTPLLNPLAGRAPYGEHLHFGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDSSSATE
DSKTNLNSSGKPASNSDGPKFPGDKSSVPSNNNQQKKGIQVLPDGRVTNIPIGMVTDQFG
MIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFH
VPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEER
VWITRAPGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPSTFNYNPA
QQAF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggaggggggggtggagagcgactacgccgac
gactccagcctctactacagccagcagtccatgttccctcctcaccgcgcagacaaagac
atgttggtgtcgtcgtcctcgtccacgtcgggtcaactgtcgcagctgggaagcagctta
tatggtccgcagagcgcattgggttttcccatgcgaggtctgaacagcagcgcggcgccg
ccgctgagtcgaagcggcctgaacccgtctgccagccagctctccagccacgtcagcaca
cccagcaccggcaccatgcacacgcccccttcacccagcagggggatcctgccgatgagt
cggagcgtgatgaaccacaatcagcaggtcggcggtcccacgggtcagacgggcgggatg
ggcgttggcatcggaggagagcggggcgtcggcagcggagggaggagtggcggcggcatg
ggcagccccagtcggtcgtcgcccagcatcatcggcatgcccaaaccacagcaggcacgg
cagccgttcaccatcaacagtatgtcggggtttggcgtgaacaggaatcccggcttcaac
ctaaacaactcattatccaacaacatcttcaatggaacagatggcagtgagaacgtgacg
ggtctggacctgtcggacttcccggcgttagcggaccggagtcggagggacggcggttcg
aatcccaccccgctgctcaacccgctggccggtcgggcgccgtacggtgagcaccttcac
tttggcatggtaaccaagccgtccagtgagcagtcgcaagacttctccatccacaacgag
gacttcccggctctgcctggacccaactaccagacgaaagactccagcagcgccaccgaa
gacagcaaaacgaatctgaactcatcaggaaagcccgcctccaactcagatggtccaaag
ttccccggcgacaagagctcggtgccgagcaacaacaaccagcagaagaaagggatccag
gttcttcctgacgggcgtgtgaccaacatccccatcggcatggtaacggaccagtttgga
atgatcggcctgttgacgttcatccgggcagcggagacggaccccggcatggtccacctg
gcgctgggctcggacctcacaacgctcggcctcaacctcaactcacccgagaatctctat
cctaagtttgcgtctccgtgggcgtcggctccgtgtcgaccgcaggatatcgacttccac
gtcccctcagagtatttaaccaacatccacataagggacaagttagcagccatcaagttg
tctcgatacggtgaagatctgctgttttatctctactacatgaacggaggagatctacta
caactgctggctgcggtagaactctttaacagggactggcggtaccacaaagaggagcgg
gtctggatcacccgggccccggggatggagcccacgctgaagaccaacgcctacgagaga
gggacctactacttcttcgactgcctcaactggaggaaagtggccaaggagttccatctg
gagtacgagaagctagaagagcggcctcacgttccctccacgttcaactacaatcctgcc
cagcaggccttctga
DBGET
integrated database retrieval system
