KEGG   Scophthalmus maximus (turbot): 118287326
Entry
118287326         CDS       T09850                                 
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:smau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118287326 (snf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118287326 (snf8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118287326 (snf8)
Membrane trafficking [BR:smau04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    118287326 (snf8)
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118287326 (snf8)
SSDB
Motif
Pfam: EAP30 MarR_2 AbiEi_4 RPA_interact_C Sigma70_r1_1 DUF4896
Other DBs
NCBI-GeneID: 118287326
NCBI-ProteinID: XP_035468301
UniProt: A0A2U9CPH7
LinkDB
Position
16:complement(19423357..19427321)
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGNVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
NPQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKYAQDVSQDDLVRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWEKERACHVLDHLLKEGLAWLDSQAAGEAQYWLPALF
SELISRDVTPEEANQMTP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcaccgcagaggagtcggggcgggagccatcgctaagaagaagctggcagaggctaaa
tacaaggaaagaggaaatgttctcgccgaggaccaaattgttcagatgtccaagcagctg
gagaccttcaaatccaacctggaggagtttgccagcaaacacaaacaggaaattcgaaag
aacccacaattcagggttcagttccaggaaatgtgtgccaccatcggagtcgacccactt
gcctctggaaaaggtttttggtctgagatgctcggagtcggtgacttctactatgagctc
ggtgtgcagattattgaagtgtgtctggccctgaaacacagaaacggagggctcattact
ttggacgaactccaccagagagtcctgaagggaagagggaaatacgctcaggacgtgagc
caagacgacttggtgagagccataaagaagctgaaggtgatggggaatggtttcgggatg
attcctgtcggtgggtcttacctggtgcagtcggtcccggcggagctcaacatggaccat
accgtggttctacagctggccgagaagaagggatacgtgacggtgagtgagatcagggac
agtctgaaatgggagaaggagcgagcgtgtcacgtcctggatcacctactgaaggaaggc
ctggcctggttggactctcaggcagccggagaggcgcagtactggctgcccgctctcttc
tctgagctcatttcgcgtgatgtcactccagaggaggccaatcagatgacaccttaa

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