Scophthalmus maximus (turbot): 118287357
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Entry
118287357 CDS
T09850
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118287357 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118287357 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smau02044
]
118287357 (sec31b)
Membrane trafficking [BR:
smau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118287357 (sec31b)
Secretion system [BR:
smau02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
118287357 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_EIPR1
TPR_Sec16
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
SRA1
Prp18
MukF_M
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
118287357
NCBI-ProteinID:
XP_035468344
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All DBs
Position
16:complement(15064250..15077579)
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AA seq
1213 aa
AA seq
DB search
MRLKEIQRTAHQAWSPAGHHPICLALGTSAQQLDASFNTTAALEIFETDFSDPCLDMQLK
GSLPTANRLHSIVWVNFGMGEDGIGGRLIGGSENGTLTVYNPEEIMSSGADAVVGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFNSPMTPGAKTQPAEDVSVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVI
QMWDLRFATSPLKVFENHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDVQWCPRNPALLSTASFDGRITVYSVMGGSLKAQQQSAADKISSSFDTMDPFGT
GQVLPPLQVPQPTMQDTIVPPLKKPPKWVRRPVGASFAFGGKLITFENTKLPPAQSPQPV
PRQVFMSQVTTETEFLQRSRELQATLQAGSFNNYCQAKIQNAKSDAEQDIWKFLLVNFED
EARIKFLRLLGFSKDELEKKISKCLGNNFQHNGHGVDAKDLAEKMQRLSTERSDDSAAVG
DAARTSGSVSPADFFSRTPKENSNFQIPVSCDTDGLISQALLVGNFEGAVDLCLNDGRYA
EAILLSISGGEELLKKTQQKYLSKQKNSISMLISSVVTQNWRDIVQSCELDNWKEALAAL
LTYAHPEDFARLCDTLGGRLECEGTEKRCLQACLCYICSGNVEKLVECWALHRDCSSPLG
LEDLVEKVMMLRKSIERLRNSEVAVQSPVLAEKLTCYAGILAAEGSLSTAMTYLPENSDQ
PGITMLRDRLFHAQGEVAVGQQPPDSFNRVNVSTAKTAPAAQAPAPKAQIMSQYQPSAPS
QVAAQSQPPMPSVFTRQAPPTNTGPGLPPSSHVLPPGAARPAMRPSYPQHPAPAPGFLPP
QPFQPHPMSMGGPSAFPPPGPSMPAASLSGPPLPPSSSTPGGLPPMPSPGVPPTGFMPST
SLAASFMPPSSQPGAPVPMYPGGPHNQGPAPPMTSGPYAPLGSGYPQGGPGAPAVKPYPG
PAVAPPPTGAHEGWNDPPAVRGGPRKKKVPDNYTPPAPITAPVMGFPVDAPQPHDHAQVP
PGAPQEPSVKLLQQLPAERVEQKEIPAEHMVLKSTFDSLVQRCQLAAGDPQTKRKLDDAA
KRLGFLYDKLREQSLSHNILNGLHEISRCVASQNYQRGLEVHTQVVTSSNFSEISAFMPI
LKVVMTIANKLGV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaagagatccagaggactgcccaccaggcctggagtcctgcaggacaccat
cccatctgcctggccttaggaacgtcggcacagcagctcgatgcctctttcaacaccaca
gctgccctggagatatttgagacagacttttcggacccctgtcttgatatgcagctgaaa
gggtcgttacccaccgcaaacaggttgcacagcattgtatgggtgaactttggaatggga
gaagatggtataggaggaagactgattggtggcagtgaaaatggcacattgactgtatat
aacccagaggagataatgagctctggagcggacgcagtcgtgggacagtctgacaaacac
actgggcccgttcgggctctcgatttcaacccctttcagagtaatctgctcgcatcagga
gcaaatgattcagagatatacatctgggatctaaacaacttcaacagtccaatgacaccc
ggagcaaagacacagcctgctgaagacgtcagtgtcgtgtcctggaacaggcaggttcag
cacatcctggcctctgccaacccaagtgggaaagccgtcgtgtgggacctgagaaagaac
gagcccattatcaagatcagtgaccacagcaacaggatgcactgttcaggaatgctctgg
cacccagacgtggccactcaattggtgttggcctccgaagatgacagactgccggtcatc
caaatgtgggacctccgttttgccacatcacccctcaaagtctttgagaaccacacaagg
ggaattctgtccatatcctggagccaagccgactctgagctcctgctgagtagtgctaaa
gacaaccgcatcctctgctggaatccgaacactggagaggtaatttacgagcttccaacg
acaaaccagtggtgttttgacgttcagtggtgccccaggaatccagcactgctttcaaca
gcatcgtttgatggtagaatcacggtctactctgtgatgggagggagcttgaaggctcag
cagcaaagcgcagctgataagatatcctcctcatttgatacaatggatccctttggtaca
gggcaggtgctccctcccctgcaagttcctcagccaaccatgcaggacaccatagttccc
cctctgaagaagccacctaagtgggtgcgcaggccagtgggggcttcctttgcttttggt
ggaaaactgataacctttgagaataccaaactgcctccagcgcagagcccccaacccgtc
ccccggcaagtgtttatgagccaggttaccacggagacagagttcctacaacgctccagg
gagttgcaagcgacgctgcaggcgggttccttcaacaactactgccaggccaagattcag
aacgccaagtccgatgctgagcaggacatatggaagttccttctggttaattttgaggat
gaagcccgcattaaattcctcagacttctgggtttcagcaaagatgaattagagaaaaag
atttcaaaatgcctggggaacaattttcaacacaacggacacggagtcgatgccaaagat
ctggcagaaaagatgcagcggctttccaccgagaggtcggatgactccgctgctgttggt
gacgccgctcgaacatcaggttctgtttcaccagcagacttcttcagtcggaccccgaag
gaaaactcaaacttccagatccctgtatcgtgtgatactgatgggttgataagccaggcg
ctgctggtcggtaactttgagggggctgtggatctgtgtcttaatgatggtcgctacgcg
gaagccatcctcctctccatcagtggaggagaagagctgctcaagaaaactcagcaaaaa
tacctgagcaagcaaaagaacagcatttcaatgcttatatcatcggtggtcacccagaac
tggcgagacattgtacaaagctgcgagttggacaactggaaggaggctcttgccgctctt
ctgacttatgctcaccctgaagactttgcccgcctgtgcgatacgctgggaggtcggttg
gagtgtgaggggacagagaagcgctgcctgcaggcctgtctgtgttacatctgctctggg
aacgttgagaagctggtggagtgctgggccttgcatagagactgctcttcccctcttggc
ttagaggatctggttgagaaagtgatgatgctgcgcaagtcaatcgagcgcctgcggaac
agcgaggttgcagtccagagccccgtcctggccgagaagctcacctgctacgccggaatc
ctcgctgcagagggcagcctgtccaccgccatgacctacctgcctgagaactctgaccag
cctgggatcacgatgctgagagacaggctgttccacgctcagggagaagttgccgttgga
cagcagcctccagattccttcaacagagtaaatgtgtcgacagccaagactgctcctgct
gctcaggctcccgcaccaaaagcacaaattatgagtcagtaccagccctctgccccttcc
caggtggctgcacaatcgcagcctcctatgccgtcggtttttacccgacaagctcctcca
accaacactgggcctggtctgccgccctcctctcatgtcctgccgcccggtgcagcccgc
cctgccatgaggccctcctacccacaacaccctgctccggctccaggtttccttcctcct
cagccattccagcctcatcccatgtctatgggcggaccctctgctttccctcctcctggt
ccctctatgccagctgccagcttatcaggacctccgttaccgccttcttcatcgaccccc
ggaggtctgccccccatgccaagccctggggtgccgccaacgggcttcatgccatctacc
tctttagccgcaagcttcatgccacccagctcccagccaggagccccggttcccatgtac
cctgggggcccccacaatcaggggcctgcacccccaatgacatctggtccctatgctcct
cttggatcagggtatccacagggaggccccggagctcctgcagtcaagccctacccaggc
cctgctgttgctcctcctcctacaggagctcatgaaggctggaatgacccaccagcagtc
cgaggtggacccaggaagaagaaggtccctgataactacactccgccagcaccaatcaca
gcccctgtgatgggattcccagtggacgcccctcagcctcacgaccacgcccaggtcccc
cccggagcccctcaggagcccagcgtcaagctcctccagcagctgcctgcagaaagggtg
gagcagaaagaaatccccgctgagcacatggtcctcaagtccaccttcgacagcctggtg
cagcgctgccagctcgcagcgggagaccctcaaacgaaaaggaaacttgatgacgcagcc
aagcgtttgggattcctctatgacaagctgagggagcagtcgctctcccacaacatcctg
aacgggctccacgagatcagccgctgcgtggcgagccagaactaccagcgcggcctggag
gtccacacccaggtggtcaccagcagcaacttcagcgagatctccgccttcatgcccatc
ctcaaggtggtcatgaccatcgctaacaagctgggcgtctaa
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integrated database retrieval system
