Scophthalmus maximus (turbot): 118287424
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Entry
118287424 CDS
T09850
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04382
Cornified envelope formation
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04518
Integrin signaling
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118287424 (itgb4)
04518 Integrin signaling
118287424 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118287424 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118287424 (itgb4)
04810 Regulation of actin cytoskeleton
118287424 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118287424 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118287424 (itgb4)
04515 Cell adhesion molecules [BR:
smau04515
]
118287424 (itgb4)
04090 CD molecules [BR:
smau04090
]
118287424 (itgb4)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118287424 (itgb4)
Exosomal proteins of bladder cancer cells
118287424 (itgb4)
Cell adhesion molecules [BR:
smau04515
]
Integrins
Integrin beta subunits
118287424 (itgb4)
CD molecules [BR:
smau04090
]
Proteins
118287424 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_integrin
EGF_TEN
I-set
SEA
Motif
Other DBs
NCBI-GeneID:
118287424
NCBI-ProteinID:
XP_035468464
LinkDB
All DBs
Position
16:6557025..6582419
Genome browser
AA seq
1949 aa
AA seq
DB search
MGRWALRLSVGLGLLAVLVTYCHAEVNYCFAARAGSCSECLQAGKGCTYCPDENFNGPRC
DLYENILAHGCSSAALLTAQSAMKVETANKINMMLQESQVSPQLMSMSFLPGEEKLVDVE
VFAPTKGPLDLYILMDFSNSMADDLANLKKMGEELALLVGTLSNDFTIGFGKFVDKVIEP
QTDMRPSKLEMPWPNSDPPFSFQNVIKLTNNVSDFSIRLQGQRISGNLDAPEGGFDAILQ
AAVCGDKIGWRNRSTHLLVFSTESAFHYEADGANVLSGILPRNDELCHLDALGKYTQDIH
QDYPSIPTLIRLLGKHNIIPIFAVTNHSFTYYTKLQEYFPIAEVGMLHEDSSNILQVMGT
AFKNIRSKMSIRAEELPKAFKAKFLTASGSVADYGAFDFKPGAIGKFKMRLKAERMIDEK
PVCQVAQRDKEGTMRVKPTNFNAAVNIKASVLCPTCECEKTPFPKAAKCHSNGDLVCGKC
HCFDGWLGAFCNCSASASALDTSQCIGPGMTESCSGRGDCMECGSCVCYNPDQFEGPYCQ
HDKTQCLRYGGFLCNDRGSCVMGRCACTEGWDGNACECPKSNQTCLDSKGGVCNGRGVCN
CGRCECRNPGTDMTSTCEPNFEAQLGVCEATRSCVQCRAWKTGKHKDCDKCPFQIVMVDE
LKESDSRIESCSFRDEDDDCTYHYTAEDSKDPKVGLLEIQVLKKKDCPPASLLWLLPLLL
FLLLLLALLLLCCWKYCACCKSCCQSCLALLPCCRRGRMVGFKEDEYLLRQSLLTSDHLD
TPMVRTGPPKGTDVVRWKVTDNVHRAPNHPQALMKPNPKETIQFPVSLRLNRLFSENLSR
PESRDAEQLRKEVADNLNEVYKQIPGAQKVQKTAFRLQRNAGKRQDYTIMDTVLSAPRSS
YPDIVKVTEKNVQSGNFHDLKVVPGYYTVATDREAAGAIEFQQDVESVDVHVPLFVKDED
DDKKQLLVEAMDVPLGIAEIGKRLVNITIIKEHATSVFSFLQPAYTYSRQDGVANIPISR
EIIEDGRTQVTYRTRDLTAKDKKDYMTVEGDLTYGPGETQKTVPVRLLELGEKDGLLEDK
QVRQFVMDLSNPRQGAKLGRYPRTTVTIADQPEPSVMMFKKGTQNFSTSEPTYTIPVVRT
RNQDSPATVKWRTKKAQRFELSGPLKFGPGETEKNIVIEPKSHPGPIQPETFHLELFDPS
SNASIGERKTTLVNVTDGAYEAPQVMKSNIGQKASSPGGLLLAPANPTAKATGPRNIHLN
WEPPSGNPMGYKVKYWIYGDPEKDAKVLDVKTPQAELTDLYPYCDYEMRVSAYNAMGEGY
NTDIVTCQTLEDGPGEPGRLAFNVISHTVTQVSWGEPAETNGNITAYEVIYTPINDEQKA
VGAAKKVKIDNPKKRMLLIENLQRAQTYQYKVRAKNSVGWGPFRDATINLASQPARPLSI
PIIPDIPIVDAEAGDEYDSYLMYSNEVLKSPAGSKTPSVSGDDYTVNGKWDQNFLFPGGS
ATRNLSASSSPMSTLSSNYRGAGGSFTTDTTTTYMSGAGSSRRQEFIGGGMHTSEVTMRK
RSESRGYMDENIRDSIVLGDMPSKFPDLGGFGYTGMQSSSQSQFGYTGMQSSSQSQFGYS
LPQGPRARTESSDVHEALYNLDRVLHDARLSPGVPDTPSRLVFSALGPTALKVSWQEPQC
ERDIVGYCVLYQLLNGGDANRINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGPERE
GVITIESAVDPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILG
YVVTCEQLHGGGDVRSFQVNGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIIT
IESQDGGALSQYSNQSMTRRDVFQMPTEVSTRTNVSHTMLNDPYFSDGMMMTTQHTETSG
MVTRQITKEVVQRGVTGATTVTKKMFYES
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atggggagatgggcgttacgtctctcagtgggcctcgggcttcttgccgtcctggtgacc
tactgtcatgctgaagtgaactactgcttcgctgccagggctgggagctgctccgagtgc
ctgcaggctggtaaaggttgcacctactgccccgatgagaactttaacggccctcgctgt
gatctgtacgagaacatactcgcccacggctgcagctctgcggccctcctcacagctcaa
agcgccatgaaggtcgagacggcgaacaaaatcaacatgatgctccaggagtcgcaggtg
tctccgcagctgatgagcatgagctttctgccgggggaggagaagctggtggacgtggag
gtgtttgctcctaccaagggtcctctggatctttacattcttatggatttctccaactcc
atggccgacgacttggccaacttgaagaagatgggcgaggagctggctctgttggtgggg
acgctgtcaaacgacttcaccatcggcttcgggaagtttgtggacaaagtgatcgagccc
cagactgacatgagaccgtccaaacttgagatgccgtggcccaacagtgacccgccattc
tctttccaaaatgtcatcaagctgaccaacaacgtgtcggacttctccataaggctccag
ggacagagaatctctggcaacctggacgcacccgaaggaggcttcgatgccatattgcag
gctgcagtttgtggggataaaatcggttggcgcaaccgcagcacgcatctcctggttttc
tccaccgagtccgccttccactacgaggccgacggcgctaacgtgctgtccggcatcctg
ccgcgcaacgacgagctttgccacctggacgcgttgggcaaatacacgcaggacatacat
caggattacccttcaattcccacactgatccgtctgctgggcaaacacaacatcatcccc
atctttgccgtcaccaaccactccttcacatactacacgaaactccaggagtatttcccc
attgctgaggttggtatgctgcatgaggattcatccaacatcctgcaggtcatgggcacc
gccttcaagaatatccgttcgaagatgagcatccgtgcagaggaactacccaaggctttc
aaggctaagttcttgaccgccagtggaagcgttgcagattatggggcctttgatttcaag
cctggagcaataggcaagttcaagatgcgtctcaaggcggagaggatgatcgacgagaag
cccgtgtgtcaggttgcccagcgtgacaaggaggggacaatgagggtcaagccgacgaac
ttcaacgctgctgtcaacatcaaggcctcggttctgtgtccgacctgcgaatgcgagaag
actcccttccccaaagcagccaaatgccacagcaatggagacctggtgtgcgggaagtgt
cattgttttgatggctggctgggtgcgttctgtaactgctccgcaagcgcctcagctctg
gacaccagccagtgcatcggcccgggcatgacggagtcctgctccggccgcggcgactgc
atggagtgtggaagctgcgtgtgctacaacccagatcagttcgagggaccctactgtcag
cacgacaagacccagtgtctaagatacggaggcttcctctgcaatgaccgtggctcctgc
gtcatgggtcggtgtgcatgcacagaaggctgggatggaaacgcctgcgagtgtcccaag
agcaaccagacctgtctggacagcaaagggggtgtctgcaatgggcgaggtgtatgcaac
tgcggccgctgcgagtgtcggaaccccggcacggacatgacttcaacctgtgagccaaat
ttcgaggcccagctgggtgtgtgtgaggctacgagaagttgtgtccagtgtcgagcctgg
aagacgggaaagcataaggattgtgacaaatgccccttccaaattgtaatggtggatgag
ctcaaagaatcggatagcaggattgaatcgtgcagcttccgcgacgaggatgatgactgt
acataccactacaccgccgaagactcgaaagatccaaaagtcggactcctggagattcag
gtgctcaaaaagaaagattgtccccctgcgagcctcctgtggttgctccctctcctcttg
ttcctgttgttactgttggcactgctgctcctctgctgctggaaatactgcgcctgctgc
aagagctgctgtcagagctgtcttgccctgctgccttgctgtaggagaggtcgcatggtc
ggcttcaaggaggacgagtatttgctccgacagtccctgctcacctcagaccatctggac
acgccgatggtgaggaccggcccgcccaaagggaccgatgtggtccgctggaaggtcaca
gataatgtacaccgagcacccaaccaccctcaggctctgatgaagccgaatccaaaagaa
accatccagttcccagtctccctccgactgaacaggttgttctctgagaacctgtctcgc
cctgaatccagagacgccgagcagctccgcaaggaagtggccgataatctcaacgaggtg
tacaaacagattcccggggcgcagaaggtgcaaaagaccgctttcagattgcagagaaat
gctgggaaaaggcaggactacaccatcatggacaccgtcctgtctgctcctcgcagcagc
taccccgatatcgtcaaagtcactgagaaaaatgtccagtctggaaacttccatgacctc
aaagtggtgcctggctactacactgtggccacagacagagaggctgcgggagccattgag
ttccagcaagacgtggagtcggtggacgttcacgtgccgctctttgtcaaggatgaagac
gacgacaagaagcagctgctggtggaggccatggatgtgccactgggcattgcagagatc
ggaaaacgtttggtcaacatcaccatcatcaaagaacatgccaccagtgtgttctcgttc
ctgcagccggcctacacgtacagcagacaggatggagtggccaacattccaatcagcaga
gagatcattgaggacggacgcacgcaggtcacgtaccgcacacgggacctcacagccaag
gacaaaaaggactatatgactgtggaaggagacctgacctatggtcctggtgaaacccag
aagacagttcctgttcgtctgctggagttgggggagaaagatggcctcttggaggacaaa
caggtcaggcagtttgtcatggacctcagtaacccacgacagggcgccaaactgggacgc
tacccgagaactactgtcaccatcgcagaccaaccagagcccagtgtgatgatgttcaaa
aagggcacccagaacttttccacatctgaaccaacctacacaatccctgtggtccgcacc
cggaaccaggacagccccgccacagtgaaatggcgcaccaagaaggcccagcgcttcgag
ctctctggccctctgaagttcggccctggagaaacggagaagaacatagtcatcgaaccg
aaatcccatcctggtccaatccagccggagactttccatcttgagctgtttgacccaagt
agtaatgcttctattggcgagaggaagaccacccttgtcaatgtcacggacggagcttat
gaggctccccaggtgatgaagagcaacatcggacagaaagcctcctcccctggtggtctc
cttctcgctcctgcaaaccctaccgccaaagcaactggacccagaaacattcacctcaac
tgggagccaccgtccggtaacccaatgggatacaaggtgaagtactggatttatggcgac
ccagagaaagacgccaaggtattagatgtgaagacgcctcaagctgagttgaccgacctc
tacccctattgtgactacgagatgcgagtgagcgcctacaatgccatgggagaaggctac
aataccgacattgttacctgtcaaaccctggaggatgggcctggtgaaccgggacgtttg
gccttcaatgtcatcagccacactgtcactcaggtcagctggggggagcctgccgagaca
aatggcaacattacagcttatgaagtcatctacacacccatcaatgatgaacagaaggcg
gtgggcgccgccaagaaagtcaagattgacaaccccaagaagcggatgctgctgattgag
aacctccagagagcccaaacctaccagtacaaggtccgcgccaagaacagcgtgggctgg
ggccccttcagagatgctaccatcaacctggcatcacagccggccagaccgctgtccatc
cccatcattccagacatccccattgtggatgcggaggcgggagacgagtatgacagctac
ctgatgtacagcaatgaggtgctgaagtcccccgcaggctccaagacacccagcgtctct
ggtgatgattacacggtgaatgggaagtgggaccagaacttccttttcccaggggggtca
gcgacacgcaacttgtcggcctcatcctctcccatgtccactctgagctcaaactacaga
ggggcgggcggctccttcaccacggacacaaccaccacctacatgtccggggcggggagc
tctcgcagacaggaattcattggaggcggaatgcacacatccgaagtcaccatgaggaag
cgctcagagagcaggggctacatggacgagaacatccgcgactccattgtcctgggagat
atgccgagcaagtttccagatcttggtgggttcggctacactgggatgcagagcagctct
cagagccagttcggctacactgggatgcagagcagctctcagagccagttcggctacagc
ctgcctcagggtccgagggccaggaccgagtcttcagacgtccacgaggccttgtataat
ctggacagggtgctccacgatgcacgactctcccctggtgtcccagacacccccagcaga
ctggtgttctccgctctgggtcccactgccctcaaagtcagctggcaggagccccagtgt
gagagagacatcgtgggctactgtgtcctctaccagctgctcaatggaggtgacgcgaat
cgcatcaatgtgacgaacccagcggagaactctgtcatcatccaggacctgctgcccaac
cactcctacctgttcaaggtgaaggcccagagccaggagggctggggtccagagagagaa
ggagtcatcaccatcgagtctgcagtcgaccccaagagtcccctcagccccatgccaggt
tcgccatttactctgagcactcccagtgccccaggccccctggtcttcaccgctctgagc
cccgactccctgcagctcagctgggagaagcctcgcaaacccaacggagacatcctcggc
tatgtggtcacctgcgaacagctgcacggcggaggcgacgtgcgctccttccaggtgaac
ggcgacagcgctgagaccagcctgactgttcccaacctgactgagaacgttccctacaag
ttcaaagtccaggctcggaccacgcagggcttcggtcccgagagggagggcatcatcacc
atcgagtctcaagacggaggtgcattgtctcagtacagtaaccagtccatgacgcggagg
gacgttttccaaatgccgacagaagtcagcacaaggaccaacgtctcacacaccatgctc
aacgacccttacttctcagacgggatgatgatgaccacgcagcacacagagaccagcggc
atggtgactcgtcaaatcaccaaggaagtggttcagaggggtgtcaccggagccacaacc
gtcacaaagaagatgttttatgaatcataa
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integrated database retrieval system
