Scophthalmus maximus (turbot): 118287461
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Entry
118287461 CDS
T09850
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118287461 (rnf40)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118287461 (rnf40)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
118287461 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
ADIP
zf-RING_UBOX
zf-RING_2
zf-RING_5
OVT1
zf-rbx1
zf-C2H2_Z280C_D
Motif
Other DBs
NCBI-GeneID:
118287461
NCBI-ProteinID:
XP_035468574
LinkDB
All DBs
Position
16:complement(10574990..10587063)
Genome browser
AA seq
1020 aa
AA seq
DB search
MLSAASSTVSFEAERKMSGVGGGKRPSGGDSPPGPPEKKNKKEEKTTTTLIEPIRIAGVS
STEEMDMKVIQFKNKKLCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLE
ENVHVLRKRIEPVAPLTSTPAPPSAPLSDPTPMEEDGVNLASPTSTVPPPPLPEVRNDGE
QAEQQQEECQEEGQEEQQQPPPPAGSEELTPTEPSQDSAADASPPPPLSDNAKGFLTTLE
HSSEEELTLHLQDRMQFSKEAIACLVCVFDRLHSRIDNMCKHVQASAGEDNSQSDIINVN
HTLLEENSRLRDLATLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLR
NREQKLNKHLAEAMEQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRM
AELEKLQAELQEAVRESEKLKIDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLD
EARALLLTAKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNL
AANEQAGPINREMRHLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTAVLIL
EDTTSDGIDVKKEEDEDHEEEEEERRKELERQRAREREREAERERERERERERQRSDELK
RKDSDTLKMLRVELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVCSLVD
ELRMRVRELEERERKESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVT
GQAFEDMQEQNSRLLQQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLRFKTQV
DAQLLVVQKLEEKEGVLQSTLATLEKELSVRTQALELNKRKAVEAAQLAEDLKVQLEHTQ
AKLKEIQVSVAENRTARERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQ
YKAKLRCPCCNTRDKETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtgctgcatcctcaacagtttcctttgaagcagaacgaaagatgtcgggtgtt
gggggaggaaagcgtccctcaggcggggacagtccccctggcccacctgagaagaaaaac
aaaaaagaggagaagaccaccaccactctcatcgagcccattcgaatagccggagtttcc
tctacggaggaaatggacatgaaggtgatccagttcaagaataagaagctatgtgagcga
ctggagcagaggcagacgatggaggatgagttacgagagaaaattgagaagctggagaag
agacaagccacggatgacaccaccctgctgattgtcaaccgctactggtcacagttggaa
gagaatgtgcacgttctacgcaaacgcattgagccagtagctccattgacatctaccccc
gccccaccttcggcccctctctctgatcctacaccaatggaggaagatggtgtcaatctg
gcttcaccaacctcgactgttcctccacctccccttccagaggtccggaatgatggggag
caggcagagcagcagcaggaggagtgtcaggaagagggtcaggaggagcagcagcagcct
cctcctcctgctgggtcagaagagttgacacccacagagccctcacaggactcagcagca
gatgcgtcaccacctcctccattaagtgataatgccaagggtttcctgactacgctggag
cacagcagcgaggaagagctcaccctgcacctccaggaccgcatgcagttcagcaaggaa
gccattgcctgcttggtctgcgtctttgacaggctgcacagccgaatcgacaatatgtgc
aagcatgtccaagcctcagcaggtgaggacaatagccagtctgacatcatcaatgtgaac
cacactctgctggaggagaacagtcgactgagagaccttgccactctcctgcagggtcgt
caccacaagatgtctatggagtacaatgagttggtagacaaggtgaccagctctgagacc
aaggtgtctgagatggagacgacagtggaggacctgcagtgggacattgagaagctccgc
aacagggaacagaagctcaacaaacatctggcagaggccatggagcagctgaagtctggg
tacagcagcactggcagctcaggtgggctacctggaggtcagattacgctgaatattcag
aagtttgagagtctcaacgcagagttggagcacaaccaagagttggcaaacagccggatg
gcagagttggagaaactgcaggcggagctccaggaggctgttcgagagagtgagaagctc
aagattgatttgcgcaatattccagaggaggttgtgaaggagactctagaatacaagtgt
ctgcagtctcagttctccctcctgtacaatgagtccctcggggtcaaaacccagctggac
gaggcacgggcactcctactcactgcgaagaacgcccacctccgtcagattgagcacatg
gagagtgatgagctgtcgcttcagaagaaactgcgaactgaggtcatccagctggaagat
accttggcccaggttcgcaaagagtacgagatgctgcgcattgagtttgagcagaacctg
gcagccaatgagcaagcaggaccaatcaacagggagatgcgacacttaatcagcagcctt
cagaaccacaatctgcagttgaaaggtgatgtccagcgttataagaggaagttacgagaa
acacagatggagatcaacaagttacgatgtcagagtggcgacacagcagttctgattctg
gaggatacgacgagtgatggcatcgatgtgaagaaagaggaggatgaggaccatgaggag
gaggaggaagagaggaggaaggagcttgagagacagcgggccagggagagggagagggag
gctgagcgagaacgagagagggagcgcgagagagagcgacagcgcagcgacgagctaaag
agaaaagactcggacactctgaagatgctcagagtggaactcaagaaagcccaggagtcc
cagaaagagatgaagctgttgttggacatgtacaagtcagctccaaaggagcaaagggac
aaagtgcagctcatggcggctgagcgcaaatcgaaagctgaggtttgttctttggtggat
gagttgaggatgcgggtgcgagagttggaggagagggagcggaaggaaagcaagaagctg
gctgatgaagatgccctcagaaagatccgagttgcagaagagaccattgaacatctgcag
aagaaacttgctgccactaagcaggaggaggaagccctgctgagtgagatggatgtgacc
ggccaggcctttgaggacatgcaggagcagaacagccgactgttgcagcagttgcgggag
aaggatgacgccaacttcaagctgatgagtgagcgaataaaatcgaaccagatctacaag
ctgctgaaagaggagaaggaggagctggctgaccaagttctcagattcaaaacccaggtg
gatgcccagctgttggttgtgcagaagctagaagaaaaagagggcgttctccagagcacg
ctggcaactctggaaaaagagctgtcggtccggacacaagcactggagctcaacaagagg
aaggcggtggaggctgcccagctggcagaagacctgaaggtgcagctggagcacacacag
gccaagctcaaggagatccaggtctctgtggcagagaaccgcaccgctcgggagagggag
agtagcaacctgaaacgagcacaggaggatctgtcgagacttagacgtaagctggagaaa
cagaagaaggtggaagtttactcggatgctgacgagatcctgcaggaggagatcaaccag
tacaaggccaaactgcgctgcccctgctgcaacacacgagacaaggagacggtgctcacc
aagtgtttccacgtattctgttacgaatgtcttaagatgcgttacgacacccgacagagg
aagtgccccaagtgcaactgtgcctttggagccaacgactttcaccgcatctacatcacc
taa
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