Scophthalmus maximus (turbot): 118287489
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Entry
118287489 CDS
T09850
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118287489 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118287489 (gspt1)
03012 Translation factors [BR:
smau03012
]
118287489 (gspt1)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118287489 (gspt1)
Translation factors [BR:
smau03012
]
Eukaryotic type
Release factors
118287489 (gspt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
118287489
NCBI-ProteinID:
XP_047183811
LinkDB
All DBs
Position
16:8621133..8628281
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AA seq
591 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAGLQAAFAALNVNAKPFVPNVNAAVFVPSFAHGGDAE
TPAPDGAPDPAASMEVAEAAAPVENGGLEADMTTEEETWEQKEEPGGGGGGGGVQEGLGE
GDACEEGATRKVEEEEEEMMMMEEEEEEMPVPKIAPAPPDAPKKEHVNVVFIGHVDAGKS
TIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFE
TEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAK
TAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGAN
LKDPVSECPWYTGLPFISHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLESGCISK
AQQLVMMPNRHTVEVLSLLSDDVETDDACPGENLKLRLKGIEEEEILPGFILCSPDNVCH
SGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVK
QDQVCIARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacggccccggattcgtgggagctggaggaggacgccgaggccccg
gcggccgcggcggggctccaggccgccttcgccgccctcaacgtcaacgccaagccgttc
gtgcccaacgtgaacgccgcggtgttcgtgccgagcttcgcccacggcggcgacgcggag
acgccggctccggacggtgcccccgacccagccgccagcatggaggtggcagaggcagcc
gctccagtggagaacggaggcctggaggctgacatgaccacggaggaggagacgtgggag
cagaaggaggagccgggaggaggtggaggaggaggaggcgtacaggagggcctgggtgaa
ggtgacgcatgcgaggaaggtgccacaaggaaagtggaggaggaggaggaggagatgatg
atgatggaggaggaagaggaggagatgcctgtgcccaaaattgctccggcgccgccagat
gcacccaagaaagagcatgttaacgtggtcttcatcggtcacgtcgatgctggcaaatca
actattggaggacagataatgtacttaactggaatggtggagaagcgaaccctggaaaaa
tatgagagagaagcgaaagaaaagaacagggagacatggtacctgtcgtgggccctggac
acaaaccaggaggagagggataaggggaagacggtggaggttgggagagcttactttgag
accgagaagaaacatttcaccatccttgacgcccccggacacaaaagctttgtccccaac
atgataggtggagcgtcacaggctgacctggccgtcctggtgatttctgcgagaaagggg
gagtttgagacgggctttgaaaagggcggacagacacgggagcacgccatgctggctaaa
acagcaggagtcaagcacctcatcgtcctggtgaataagatggacgaccccaccgtcaac
tggagcctcgaaaggtacgaggagtgtaaggagaagctggtgccatttctgaagaaggtg
ggcttcaaccccaagaaggacatctacttcatgccttgctctggactcacgggtgccaac
cttaaggaccctgtgtctgaatgcccctggtacacgggtttgccatttatttcccacctg
gacagtttgccaaacttcaccagatccaacgatggaccagtgagactacctatcgtggac
aagtacaaggatatgggcacagttatccttgggaagctggagtctggatgcatcagtaaa
gcccagcagctggtcatgatgccaaacaggcacacagtggaggtactgagcctgctgagt
gatgatgtggagacggatgatgcttgtcctggggagaatctgaagttgaggctgaagggt
atcgaggaggaagaaatcctgcccggattcatcctctgtagccccgacaacgtgtgccac
tctggtcgcacctttgacgcacagatcgtcatcattgagcacaaatcgatcatttgtcct
ggttacaatgcagtccttcacatccacacctgcattgaagaagtgcaaatcacagcctta
atctgtctggtggacaagaaaagcggggagaaaagcaaaacacgaccacgcttcgtgaag
caggaccaggtgtgtatcgccaggctccgggcagcgggagtcatctgcttagagaccttc
aaagacttccctcagatgggacgattcacgctgagagatgaaggcaaaaccatcgccatc
ggcaaagtgctgaagctggtgccagaaaaggactaa
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