Scophthalmus maximus (turbot): 118287561
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Entry
118287561 CDS
T09850
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118287561 (tdrd1)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118287561 (tdrd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
MYND_ZMYND11_ZMYD8
zf-HIT
HCV_NS2
Motif
Other DBs
NCBI-GeneID:
118287561
NCBI-ProteinID:
XP_035468759
LinkDB
All DBs
Position
16:complement(13301849..13311742)
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AA seq
1219 aa
AA seq
DB search
MNRSFSPNLVRPNLPLRKPSSSPVAVSSASTPPRPFSGPGVTAPGATGDGEPPPSLAQRT
VGDNDLTPNLAGPVQSRVSRDIAAVLGSEPPALTVYICNFCGQQGNFRCKRCKKTPYCSV
TCQTEDWKVHRHTCRSIDQEPAKEKPKEVTASPVAGERTGQLEMKPADASTLPRVYLKDL
NMTKIATGTDFQVSVVEFYSPGRFYLHAQSPELQEALQVISTELQKTYNCASVTTYVPCV
GEVCGVQFSCDRNWYRGLVQTLSADQKTTKILYIDFGNEEDVPVERIRPLTANIQPFSPC
AMECRIAGVVPSAGNWSGQCSIAVRQLLGGKAVTAKLVETLESGHVHAVDILLSMGKKLS
VILLEHGFAEEQVNATPTRQDIISVWSSDSMTSASLENFKRRSSGKDDNAWAQPPEPLTQ
AVGESFPVVITHFQSPSDIIVQKVEHAGVIQELQFSLREHCCQVPAPQNFRPAPGTVCCA
QFSEDKQWYRSKVLAYPSEERVCVGYLDFGNSEEVDLVNLRAISTSLLALPMQAMPCGLA
GVQPVGERWSEDCLLALQRRLSNRILRIEIQGKDPLAGKALVAMIDEASDPQANVAELLI
SAGYAAPAPVTTASDQQVDQTTIASAEPHVSLPAREPLVWSFTKIPCDGQTVVLLPSVVD
NPGEFYCRVDNLADHQRLIELGVELKQHCETDNSPFEPTVGEPCCAMFPGDGAWYRAMVK
ELSENHVSVNIVDYGYSMNIERNHLRSITPRLLTLPFQAIRCWLSGVEPLGSEWSSEALL
WFQTRVDSELLSARVLSATERGYGVELKSRGQNVADALISEQLAKVPGKTPKETHANTGS
EAKYQKSAKDNEHSQMHAQASNQAGASSKQKPTEGQTAVPSEVPSFPVDWKAAELPLNQT
FKPYIVAVTSPSLFYLPNPSQRDQQKLQQLMMEVAAFCTNNQASLSSAVLSIPAPGAACC
AQFSGDNNWYRAVILEVGKNEMCVIYADYGNIEKVPFSRILPIPMHLLQLPFQITRCTLT
GKEHFPVVWPEEVQQMFQNTILNGVLATVQSFDGSANVLSLTLPSEMGGGHVTAMLVDAL
LVQNKSDPRPATTRTADQANGSTPTASTPAEPHRPPPRSILESLNGLNHTSATAGQSITS
DPKPQTHQQDKNTSAESVSDSPVQKIIEQKKPPVKVNPETNDRQTSGCCCASLKTKIDQL
EQLMQLQLSLIKLLVGQRK
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctcgttttctccaaacctggtccgacccaacctgccgttgaggaaaccgtcg
tcgagccccgtggccgtttcctcggcgtcgactcccccgagacccttcagcgggcccggc
gtgacggctcccggcgccacgggagacggtgaaccaccgccctccttggcacaaaggacc
gtcggcgacaatgacctgacccctaacctggcaggtcctgtacagtcacgagtcagcagg
gatatcgccgcagtgttgggatccgagccaccagcactgacggtctacatctgcaacttt
tgcggtcaacaaggaaattttcggtgcaagcgctgcaagaagacgccgtactgctccgtg
acgtgccagacagaagactggaaggtgcacagacacacgtgcaggtccattgatcaagaa
cctgcaaaagaaaaaccaaaggaagtcacagcatcgcctgtggcaggagagcgaactggc
cagttggagatgaagcctgctgatgcatccaccctcccgagggtgtatttgaaagacttg
aatatgactaaaattgctacggggacagacttccaggtatctgttgtagagttctacagc
ccgggcaggttttacctccatgcccaaagccccgagctgcaggaagctctgcaggtcatc
agcacggagcttcagaaaacttacaactgcgcctcagtaacaacatatgtcccctgtgtt
ggggaggtgtgcggagtgcagttctcctgcgatcggaactggtaccgaggcctggtccag
actttgtctgccgaccagaaaacgactaaaatcctttacattgactttggcaatgaagag
gacgtccctgtggaaaggatcagacctctgactgccaatatccagcctttttctccttgc
gcaatggagtgccgtatcgctggggtggtgccatcggctggcaactggtcaggccagtgc
agtattgcggtgagacagctgctggggggcaaggctgtgactgccaagcttgtggaaaca
ctagagagcggccacgtccacgctgtggacattctgctttctatgggaaagaaattgagt
gtaatcctccttgaacatggttttgcagaggaacaggtcaatgcaacaccgactcggcaa
gatataatatctgtttggtcttcagactccatgacgagtgcgtccttggaaaacttcaag
cgtcgctccagtggcaaggatgacaacgcctgggctcagcctcccgagcctctgacacag
gcagtgggcgagtcctttcctgtcgtgatcactcactttcaatcacccagtgacataatt
gtacagaaggtagaacatgcaggagtgattcaggagttgcagttcagcctgagggaacac
tgctgtcaagtcccagccccccagaacttcagaccagcacccggcaccgtttgctgtgcc
cagttctcagaggacaagcagtggtacaggtccaaagttctggcctatccatctgaagaa
cgcgtctgcgttggctatcttgattttggcaactccgaggaggtagatttggttaatcta
cgggcgattagcacttccctactggccctgccaatgcaggcgatgccttgtggtctagca
ggggtccagcctgttggggagagatggtccgaggactgcctgttggccctgcagcgaaga
ctatcgaacagaatactgcgcattgagatccaggggaaagatcctttagctggcaaggct
ctggtggccatgattgatgaggccagcgaccctcaggccaatgtagccgagctactgatc
tctgctggttatgctgcacccgctcctgttactaccgccagtgaccagcaggttgaccag
acaactattgcttctgctgaaccacatgtgtctctcccagcccgtgagcctttggtgtgg
tctttcaccaagattccctgtgacggccagacagtggtgctgctgcccagtgttgtggat
aaccctggagagttctactgccgtgttgataatcttgcagaccatcagcggctgatagag
ctcggggttgaattgaagcagcattgtgagacggataactccccttttgagcccactgtg
ggggagccttgctgtgccatgtttcctggtgatggagcatggtatcgggctatggtgaag
gagctgtctgagaaccacgtgtctgtcaatattgtggactacggttacagcatgaatata
gaaaggaaccacctcagatccattacacctcgacttctgactctacccttccaggcaatc
cgctgctggctctcaggagtggagcccctgggttccgagtggagcagcgaagccctgctg
tggttccagactcgtgtggacagcgagctgctctctgcacgtgtcctttccgccactgaa
cggggctacggtgtggagctgaagagcagggggcagaatgtggcagatgccctcatttcc
gagcaactggctaaagttcctggcaagactcccaaagagacgcacgcaaacacgggctct
gaagccaaataccaaaagagtgcaaaggataatgagcacagccaaatgcatgcacaagcc
tccaaccaggcaggggccagttccaaacagaaaccaactgaagggcagactgctgtgccg
tctgaagtaccatctttcccagtggactggaaagcagcggagttgcctcttaaccagacc
tttaagccgtacattgtggctgtcacaagtccttccctcttctacctgcctaatcccagc
caaagagaccagcagaagcttcagcagttgatgatggaggtggctgccttctgcaccaac
aaccaggcttccttatcatctgctgtcctgagcataccagctcccggggctgcctgctgt
gcccagttctctggcgacaataactggtaccgtgctgtgatcctggaagtcggtaagaat
gagatgtgtgtgatctatgcagactacggcaacattgaaaaggtgccgttctcccggatc
ttgcccatccccatgcacctgctgcagcttccctttcagatcacccgctgcaccctcact
ggtaaggagcactttcccgtagtgtggccagaggaagtgcagcagatgtttcaaaacacc
attttgaatggcgtcctggccaccgtccagtccttcgatggctctgccaacgtgctgtca
ctcaccctgccctctgagatgggcggggggcacgtcactgccatgttagtggacgcgcta
ctggtccagaacaagagtgatcctcgcccagccaccaccaggacggctgaccaagctaac
ggcagcacacctaccgccagcactccagccgagccccaccgccccccgccccggtcaata
ctcgaaagcctgaacgggctgaaccacacatcagctaccgctggtcagagcataacttca
gatccaaagccccaaactcaccaacaggataaaaacacttctgcagagtcagtcagtgac
agtcctgtgcaaaagattattgagcaaaagaagccgccagtcaaagtgaacccagaaacg
aatgatcgtcagacgtctggctgctgctgtgcgagtctgaagactaagattgatcaactg
gaacagctgatgcagctgcagctttctctcatcaagctgttggtcggacagaggaaataa
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