Scophthalmus maximus (turbot): 118287582
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Entry
118287582 CDS
T09850
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118287582 (mms19)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118287582 (mms19)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118287582 (mms19)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
118287582 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
CLASP_N
API5
PP4R3
Motif
Other DBs
NCBI-GeneID:
118287582
NCBI-ProteinID:
XP_035468792
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All DBs
Position
16:8188451..8202659
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AA seq
1032 aa
AA seq
DB search
MMAADGALLLSLVEEFVSGLQDSKAKDTAAGVRNGQFTVLQLVEALGLSLTSSQPHTRAR
GVQLLSEVLHECYGNLTEREVEVLIAFYENRLKDHYVITPSVLQGLRALTKCAALPPGSA
VSMLRSLFQDVHVQSLMLVERSCVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDP
RNLLLAFQIAKNIVHRGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITKEELIETLRA
VLTGTPKFAEFLLPLIIEKLDSDVQSAKLDSLQTLTACVSQYEHKDLAEFLEGLWTSLRR
EVFQTSSERIESAGLAAVTALTSCLSRSVLNSDSEDSLSTFLDLVLKDCKHHLCEPDLKL
VWPSAKLLQAACSASSRASHATTAAVMPSLIEQYSSRTQCSHRRTLLEVVLRFIQSVKTS
QSSENEESVFSAFRQSLCGMVFSALSETNASLQITATSMLTSLAQQTGLLLDSDVELAVD
HLTRLLLTEEDDRVSLAVVDCAGALAELHPTVFITKLIPRLKKEMFSEPMDEGDNRAASG
QPSHHAMRQRCLSALAAVSTRPGVVRESTPVLLEVLGSVHAGSAAFSVEEVVSACHSLRR
IAEQVQDTEEMGRCFHEVVIPRLISLALQAALQGEGSSGRRSPLVEEVVLSAVVSVISTS
CARLQPMLAGQTASRAVSLFLDDDVSFLPDNSFPSQIQLLKKQQGDSWSRSQMVCLLMGC
VCSLPRSVEVPQIDQLMSQLEELSCTCSHPLSYNSAAKCFSGLVNKRPQGDSLDSLVQTM
MKRVCRELDSSSSPVRTQALTLMIWVSKALLLRYHPLSTALTDKLFSLLDDTDLGAAAAD
GFSLLMSDSSDVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKSNYLKALSNIV
NKLPKQVQITELPALLSLLLEALSCPDQGVQLSTLSCLEPVLVDPPPALIQQLEALVSRL
LALTSSPTMSVKIASMRCIHAISRFPEHEILPFRARVLRALARPLDDRKRLVRSEAVQAR
GEWFLVGSPGGR
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcggatggtgccttgctgctgtctctggtggaggaattcgtctcgggacta
caggacagcaaggccaaagacaccgctgcaggtgtcagaaatggacagttcacagtgctg
cagctggtggaggcactgggactgagtttgacgagctctcagcctcacactcgagccagg
ggagtccagctgctgtctgaggttttgcacgagtgctatggaaatcttacagagagagaa
gtggaagtgctgattgctttctatgaaaaccgtcttaaggaccattacgtcatcacgccg
tctgtcttgcaggggctcagggctctgacaaaatgtgcggcgttgcctcccggctcagct
gtgtccatgctgaggtctttgttccaggatgttcatgtacagtctctgatgctggtggaa
agatcgtgcgtctacaacatgctcatcaacctcatggagaccagagaggctgagctgaag
ggtctgggtgcagactttgtgtttggctttgttcagtcaatggatggcgagagggatcct
cgcaacctcttgctcgccttccagatcgcaaagaacatcgtccatcgaggttacgattta
ggtaaattcacagaggagctgtttgaagttacgtcctgctatttccccatcgacttctcc
cctcctcccaatgacccccacggcatcaccaaagaggaactcattgagacgctgagggcc
gtactcaccgggacaccgaaatttgctgagtttctgttgccgctcatcatcgagaagctg
gactcagacgttcagagtgcgaagctggactcgctgcagactctgacggcctgtgtgtca
caatatgaacataaggacctggcagaattccttgagggactgtggacatcactgcgcaga
gaggtgttccagacatccagtgagaggattgagtctgcaggcctcgctgctgtgaccgca
ctcacttcctgtctgtctcgctctgtcctcaactctgactctgaagactccctcagcacc
ttcctggacctcgttctcaaagactgcaaacatcatctgtgtgagccggacctgaagctt
gtgtggcctagtgccaagctgctgcaggccgcatgcagcgcatccagcagggcgagccac
gccacgacggctgccgtcatgccctcgctcatcgagcagtacagcagcagaacacagtgt
tcccacagacggacactactggaggtggtgctgcgattcatccagtcggtgaagaccagc
cagtcgtcagagaacgaagagagtgtgttctcagcctttcgtcagtccctgtgcggcatg
gtgttttcagccctgtccgagaccaacgccagtctgcagatcacggccacctccatgctc
acctcactggcacagcagacaggtctgctgctagactctgacgttgagttggctgtcgat
cacctgaccagactgctgctgacggaggaggatgacagagtcagtcttgctgtggtcgat
tgtgccggagcgttagcagagctgcacccaactgtctttatcaccaaactgatcccaaga
ctgaagaaggagatgttttctgagcccatggatgaaggtgacaacagagcagcgtctggg
cagccttcccatcatgcaatgcgtcagcggtgtttgtctgctctggccgcggtgtccacc
agacccggcgttgtccgggagagcacacctgtcctcctggaggtcctcggctcggtgcac
gcaggaagcgcggctttctccgtggaggaggtggtgtcggcgtgtcacagcctccggagg
atagcggagcaggtccaggacacggaggagatgggccggtgcttccacgaagtcgtcatc
ccccgcctgatttcgctggcgctccaagctgcactgcagggtgaggggtcctctggtcgt
cgtagtcctctggtggaggaggtggtcctgtctgccgtggtctctgtcatcagtacttcc
tgcgccaggctgcagccaatgttggcagggcagacggcgtcgagggccgtctctctcttc
ttggacgacgacgtctcctttttgcccgacaactccttcccctcgcagatccagctgctc
aagaagcagcagggggactcgtggagccggtctcagatggtctgtctgctcatgggctgc
gtgtgctcgctacctcgcagtgtggaggtgccccagatcgaccagctgatgtcacagctg
gaggagctgagctgcacctgcagccatccgctgtcgtacaactccgccgctaagtgcttc
tccgggctggtcaacaagcgaccgcagggtgattctctggacagcctcgttcagacgatg
atgaagagagtttgcagagagctggactcttcatcttcacctgtacgcactcaggctctc
accctcatgatctgggtgtccaaggctttgcttctccgataccaccctctgtccacagca
ctgactgacaagctcttctctctgctcgatgacaccgacctgggtgcggcggcggcggac
ggcttctcgctgctgatgagcgactcctccgacgtcctcaaccgcggttgccacgccgac
gttcgcatcatgtatcgccagcgcttctttagtgagaactctgcgaagctggtccagggc
ttcaatgccgcgccgcaagagaagaagtccaactacctgaaggctctgtccaacatagtc
aacaaactgccgaagcaggtccagatcaccgaactaccagcgctcctgtcactgctgctg
gaggccttgtcatgtcctgaccagggcgtccagctgtccaccctgtcctgcctggagccc
gtcctcgtcgacccaccaccagctctcatacagcagctggaggccttggtcagcaggctg
ctggccctcacctctagtcccacaatgagcgtaaagatcgcctcgatgcgctgcatccat
gccatttcccgcttccccgaacatgagatcttgccatttcgggcccgggtgctgcgagct
ctggcccgaccactggacgacaggaagaggctggtgaggagcgaggcggtccaagcccga
ggagagtggttcctggtgggaagtcctgggggaaggtga
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