Scophthalmus maximus (turbot): 118287583
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Entry
118287583 CDS
T09850
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118287583 (vps35l)
Membrane trafficking [BR:
smau04131
]
Protein recycling
Others
Retriever complex
118287583 (vps35l)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
118287583
NCBI-ProteinID:
XP_035468793
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Position
16:8210298..8221556
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AA seq
968 aa
AA seq
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MAAVQWRSRGRNYEAELQRCRPEVALVEFGDYHPLKPIMVTDTKTRHGARKGSTSSSSSS
SSSVPPDPLSSMLDGTDPLSMFAAASASETPAISRSASAGDLGRKRKEKEEEAVGADFEP
WSSKRGEILARFTTTEKLSINLFMGSDRGKAPSPGSSAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGQLVYDRIWSMCSDPRPLPDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLYV
EAAILKCNRFLNKSGIQETLPRLTAMIKGIGDPLVAAYTRAYLCRVGVEVAPHLKDSLNQ
NFFDLLGTFRQIGGESVRKQLALQRVEAPEYLTLYSPAISWILQCIAYRAPEPLLTEMME
RCKKLGNNALLLNSVMRAFRPEFVADRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACAD
PPESERLTILNEAWKVITKVRSPRDYVNCAEIWVEFTCRHFTKREVNTILADIIKHMTPD
RAFEDAYSQLQSVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEIFIKH
QLDLTRDPVILNAMLHICKTMHDSVNALTLEDERRSLALLIIGFIRMVSFGRDFEQQLSF
CVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSLS
SIFSRLSLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVEGKLRSSESFLLDFT
NNFLAMLLVVPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKVRVYVSALPLLAAMGQETY
VYSVPKVDSNETLYGGDPKFLSEINKLCETLIGQILDHLKVLGRDEQGTRRQGALAFSLF
GVLLAHGDLRNNKLSQLAVNLWNLSHKHGHCEPRVSVRTLEFVKHQAQQPDMSHLSDTVQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgcagtggcgttcccgcgggcgcaactatgaggcggagctgcagagatgt
cgtcctgaggtggccctggtcgagtttggagactaccatcccctcaagcccataatggtg
accgatacaaagacccgccatggggctcgtaagggtagcacctcctcctcttcctcctcc
tcttcctcggtgcccccagaccccctcagctccatgctggatgggaccgaccccctgtcc
atgtttgcagcagcctcggccagtgagactccagccatttcacgcagcgcctctgcaggg
gaccttgggagaaagaggaaggagaaggaggaagaggcggtgggagcagactttgagccc
tggtcttcgaagcggggcgagatcctggccaggttcaccaccacggaaaaactctcgatc
aatcttttcatgggctctgatcgaggaaaagctcccagcccgggatcctcagctgtgtcg
gagaaagtccgtactcgtctggaggagctggatgatctggaggagggttcccagagagag
ctgctgaacctctcccagcaggattatgccaaccgcatcgaggagctgaaccagtccttg
aaggaggcgtgggcctccgaccagaaggtcaaggccctgaagatcgtcattcagtgctcc
aagctactgtccgacacctcggtaatccagttctaccccagcaagtttgtcctcatcacc
gatatccttgacactttcggtcagctggtgtatgatagaatctggagcatgtgttccgat
ccaaggcccttgccagactcgttcacagtggacgatgtgaacgacacggccaaggagacg
tgcctcaactggttcttcaagatcgcctccatcagggagctcctgcccagactatatgtc
gaggccgccattctcaagtgtaaccgcttcctcaacaaatctggcatccaggagacgctc
cctcggttgacggctatgatcaaagggatcggagaccctttggtggcagcgtacaccaga
gcttacctctgcagggtgggcgtggaggtggccccgcacctgaaagacagcctgaaccaa
aacttcttcgacctacttgggaccttccgccaaatcggcggcgagagcgtccggaagcag
ctggcgctgcagcgggtggaggcgcccgagtacctgacgctctactcacccgccatcagc
tggatcctgcagtgcatcgcatacagagctccagagcctctgctgacagagatgatggag
agatgcaagaaactggggaacaatgccttgctgctgaattcggttatgcgggcgttcagg
ccggagtttgtcgcagacagagccactgacttcatcgggatgatcaaagactgcgacgag
gccggcttcccgaagcatctgttgttcggatccctgggccgcagcctggcgtgtgccgac
cctcccgaatcggagaggctgacgattctgaatgaagcctggaaggtcatcaccaaagtc
cgcagtcctcgggattacgtcaactgtgccgaaatctgggtggagttcacctgccgacac
tttacgaaacgcgaggtcaacacaatcctggccgacatcatcaaacacatgaccccggac
cgggcgtttgaagacgcctatagtcagctgcagtcggtgatcaggaagatcctcacctac
ttccacgacttctccgtcctcttctccatggagcgcttcctgccattccttgacatgttc
cagaaggacagcgtgagagtggaggtctgcaggtctatcatggagatcttcatcaaacac
cagctggatctcaccagagacccggtcatcctcaacgccatgctgcacatctgcaagacc
atgcacgactctgtcaacgctctcactctggaggatgagagaaggtctttagctctgctg
atcattggcttcatccgcatggtgtcttttggtcgcgactttgagcagcaactgagtttc
tgcgtggaggccagagccaccttttgtaacctggagccagttctggtgcagctcattcac
acggtgaaccagctggcgatggagaccaggcgggtgatgagagggagtcactcccggaaa
acggcggcgttcgtcagggcgtgtgctgcctacagtttcatcaccatcccgtcgctcagc
agcatcttcagccgtctcagcctctacctgctgtcgggtcaggttgcgttggccaaccag
tgcctatcccaggcggatgccttcctgaaagcagcggtcagcattcttcccgaggttcct
cgctccatcagcgtggaggggaaacttcgctcctccgagagcttcctgctggacttcacc
aacaacttcctggccatgcttctggtcgtcccggaccaccccgagcacggcgtgctctac
ctcgtccgtggtctgctcaacatggtccaggattacacctgggaggacaacagcgacgcc
aaggtgcgggtctacgtcagcgctttgcccctgctggccgccatgggccaggaaacatat
gtttactccgtccccaaagtggattccaatgagacactatatggaggagaccccaagttt
ctatcagaaatcaacaagctgtgcgagaccctgataggacagatcctggatcatctgaag
gtgcttggtcgcgatgagcagggcacgcggcgtcaaggcgccctcgccttctccctgttc
ggtgtcctgctggctcatggcgacctgaggaacaacaagctgagccagctggccgtcaac
ctgtggaacctcagccacaaacacggacactgtgagccgcgcgtctccgtccggactctg
gagtttgtcaaacaccaggctcagcagcccgacatgtctcacctgtcagacacagtccag
aggctcacactgcagtcccgcacctga
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