Scophthalmus maximus (turbot): 118287592
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Entry
118287592 CDS
T09850
Name
(RefSeq) PDZ domain-containing protein 7-like
KO
K21882
PDZ domain-containing protein 7
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smau03037
]
118287592
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118287592
Cilium and associated proteins [BR:
smau03037
]
Primary cilia and associated proteins
USH complex and associated proteins
118287592
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
118287592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
118287592
NCBI-ProteinID:
XP_035468818
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All DBs
Position
16:18169467..18178190
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AA seq
907 aa
AA seq
DB search
MAHSSDPSRREKTPAPQGSHTATRNLLRKKEQRRRGIRSSSPMGRVILINSPVDGGDDCE
DLHTITVDKSVDGKLGFSVRGGSEHGLSIFVSKVEDNSTAEEAGLLVGDKLVEVNGVSLE
SITMSSAVKVLTGNNRLRTVVRRVGKVPGIRYSKEKTTWVDLIQRRMVVEESGRTPSETS
SGGALRRIVHLYTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQNGIKMGDQILAAN
GVSFEDISHSSAVQLLKSHTHVMLTIKEAGRYPAYKEMVAEYRWLNKLANGQKSSSQGSE
SNSSASSLSSGTPVSSLSGLSQVMFPPCLPFGSDMVDVCISTEDQRFESERTETIAVQTD
LPAQMAAADSTTRSLGRTTLLRDTVIGGEEEEEEEEEERHDDGGRRRRRRESPKTSVLLA
LSRPSRPISRTQSQVTVAEISQKTEKKKKQKGKEPQEKSTLQRSKTFVNLLFRGGRKRDA
SRGRSKSPSADRTGKEGRELRAMPNSEMLGAVDDMARRLLPEDEVAAVMTTCRRYTAERS
VENLIRHLLAVLDRPEKLLLLREVRMLLPPSDLSVFNNMVAPIEVEAYDILKCRSVRTPP
LRSPTSGRAPRRRLITPIPDYRGGFELHNAEEVEKESHLLEELERLSVSGPRPSRERPPT
SRSFTPLLDIPVDGYSAGESGELGRRSASPLLPNWLLARGDHDDDPRPPLRTDIGTIRSV
HFDEVSLHSSSDADRGRPPFRNRHSKGKKERSGDRGEETVFTLQSAARRSRPLLSQVFGS
SPDRRQVASGQVNGHQASTENGLNGSDVKQEYELKTVSISKTKQSLGISISGGMESRVQP
VVKIEKIFPGGAASTCDVLKAGFELASVDGLSLHGVTHQHAVDIIRRAFSNKAKDPMVFV
VKVPKNI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcgtcagacccgtcccgcagggagaagacccccgcgcctcaggggtcgcac
accgccacacgcaacctcctgcggaagaaggagcagcggcgacgtggaatccgatcctcg
tcgcccatgggccgggtcatcctcatcaactcgcctgtggatggcggagacgactgcgag
gacctccacaccatcaccgtggacaagagtgtggatgggaagctcggcttcagcgtgcgc
ggcggctcggagcacggcctcagcatcttcgtcagtaaggtggaggacaacagtacggcg
gaggaagcgggcctgctcgtcggggacaaactggtggaggtgaacggcgtcagcctggag
agcatcaccatgagcagcgccgtcaaggtcctgacggggaacaaccggctgaggacggtg
gtgagacgcgtcggcaaagtccccggcatccgctactccaaggagaagaccacctgggtg
gacctgattcaaaggcgcatggtggtggaggagagcggccggacgccgtcggagaccagc
tcgggcggcgccctccggaggattgtccacctttacaccacctcggatgactactgcctc
ggcttcaacatccgcggggggaaggagttcggtctgggcatctatgtctccaagctggat
cccggtggcctggcggagcagaacggaataaagatgggggaccagatcctggccgccaac
ggcgtgagcttcgaggacatcagccacagcagcgctgtgcagctgctcaagagccacacg
cacgtcatgctgaccatcaaggaggcgggacggtacccggcgtacaaggagatggtggcg
gaatacaggtggctcaacaagttggccaatggtcagaagtcttcgtcccagggttcagag
tccaactcgtccgcctcgtctctgtcgtctgggacgccggtcagctccctgagcggcctg
tcccaggtcatgttccccccctgcctgccgtttggctccgacatggtggacgtctgcatc
tccactgaggaccagaggtttgagtccgagcgaacggagaccatcgccgtccagacggac
cttcctgctcagatggcggctgcggactccaccacccgcagcctgggacgcaccaccctg
ctgagagacacagtgatcggcggagaggaggaggaggaggaggaggaggaggagcgccac
gacgacggggggaggaggaggaggaggagggagtcgcccaagacgtccgtgctgctggcc
ctcagcaggccgagccgaccaatcagccggacgcagagccaggtcacggtggcagaaatc
tcgcagaagacagagaagaagaagaagcagaaagggaaggagccgcaggagaagagcacc
ctgcagcgctccaagaccttcgtcaacctgctgttcaggggcgggcgcaagagggacgcg
tccaggggccgatccaagtccccgtccgctgaccggaccggcaaagagggacgggagctc
cgtgcgatgccaaattcggagatgcttggcgcggtggacgacatggcccgcaggctgctg
cccgaggacgaggtggccgccgtcatgacgacctgccgacggtacacggccgagcggtca
gtggagaacttgatccgccacctgctggccgtgctggaccggcctgagaagctgctgctg
ctgcgggaagtccgaatgctgcttcctccttcggacctgagcgtgttcaataacatggtg
gctcccatcgaagtggaggcctacgacatcctcaagtgtcgctcagttcgaactcctcct
cttcgctctcccacgtccggtcgagcacccagacggcgcctcatcactcccatcccagat
tacagaggaggctttgagctgcacaatgccgaggaggtggagaaggagagccacctgctg
gaggagctggagaggctcagtgtgtctgggccccggccgtccagggagaggccccccacc
tccaggtccttcaccccgctgctggacatcccggtggacggatacagcgccggcgagtcg
ggcgagctcggccgccgctccgccagccccctgctgcccaactggctgctggcccgcggt
gaccacgacgatgacccccggccccccctgcgaacggacatcggcaccatccgctcggtg
cacttcgacgaggtgtcactgcactcgagctcggacgccgacaggggacgccccccgttc
agaaaccgccactccaaaggcaaaaaggagcgaagcggcgaccggggggaagaaaccgtg
ttcacgctgcagagcgccgctcgcaggagtcggcccctgttgtcgcaggtgttcggttcg
agtccggatcgacgacaagtcgcgagcggacaggtgaacggacatcaggcgtcaaccgag
aacggactcaatggctcggatgtgaaacaggagtacgagctcaaaactgtcagcatctcc
aagaccaaacagtcactgggcatcagtatctccggtgggatggagtcgagggtccagccg
gtggtgaagatcgagaagatcttccccggcggagccgcctccacctgtgacgtgctcaag
gctggattcgagttggcgtctgtggacggactctccctgcacggggtgacccatcagcac
gccgtcgacatcatccgaagagccttcagcaacaaggccaaagaccccatggtgtttgtg
gtcaaagtccccaaaaacatttga
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