Scophthalmus maximus (turbot): 118287637
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Entry
118287637 CDS
T09850
Symbol
epas1a
Name
(RefSeq) endothelial PAS domain-containing protein 1 isoform X2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04137
Mitophagy - animal
smau04140
Autophagy - animal
smau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118287637 (epas1a)
04137 Mitophagy - animal
118287637 (epas1a)
04148 Efferocytosis
118287637 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118287637 (epas1a)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118287637 (epas1a)
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GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
PAS_9
bHLH_HIF1A
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
118287637
NCBI-ProteinID:
XP_035468919
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All DBs
Position
16:16386074..16390960
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AA seq
376 aa
AA seq
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MTANREKRRAISREAAKRRRRVESDMFEDLSRLLPLQPSVGANLDKPSVIRLTLSYIRMH
TLLKVNAASEAWTSHTVGYGQVLGGGEQWRACDGGHDDGEKDAETAQAMEETNMYLSILE
GFLMVLSAEGDMIYLSDNISKYMGLTQTELMGHNIFDLTHPCDHGEIRNNLRLMGEGVWC
GAKRDFVMRIKSTLTHRERSANLKSATWKILHCQGRVKLRSTPSSASCLLLTCRPLPLSH
TLLSTHTFTSQHNMDMRFTYCDQGVTLLLGYSPEELLGRSIYDLCHTLDTSCLTKNHLNL
CLKSQSASGQYRMLVRGGGYVWVESHSAVIPIVRPSKSRLSSYQPLCILCVTYVLSGVEQ
PSLQFSLDQTTDRYLS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaaccgagagaaacgaagggcgatcagccgtgaggcggccaaaaggagacga
cgagtggagtccgacatgtttgaagatttatctcggctcctgccactccagccctccgtc
ggagccaacctggacaagccctctgtcatccgcctcaccctcagctacatacgcatgcac
acactgctcaaagtgaacgctgcgtcagaggcatggaccagtcacactgtgggatatggc
caagtgttgggaggtggagagcaatggcgagcatgtgatggaggacacgatgacggggag
aaagacgcggagacagcccaggccatggaggagacaaatatgtacctgagtatcctggag
gggtttctgatggtcctgtccgccgagggagacatgatctacctgtcggacaatatcagc
aaatacatgggcttgacacagactgagctgatgggacacaatatttttgaccttactcac
ccctgcgatcacggagaaatcagaaataatctacggctgatgggagagggagtttggtgc
ggtgctaagagggactttgtcatgaggataaaaagcactctgacacacagagaaagaagc
gccaacctcaaatcagctacgtggaagattctgcactgtcagggccgcgtgaagctgcgc
tccaccccatcttcagcttcctgcctgctgctgacgtgccgacctctgcccctctcacac
acactcctcagcacacacaccttcaccagccagcacaacatggacatgaggttcacatac
tgtgaccagggagtgactttgctgttgggctacagtcccgaggagctgctgggccgctcc
atctatgatctctgtcacacactggacacaagctgtctgaccaaaaatcacctgaacttg
tgtttgaaaagtcagtcagccagcggtcagtacaggatgctggtgagaggtggaggttac
gtctgggtggagagtcacagcgccgtcatccccattgtccgaccctccaagtccagactc
agctcctaccagccactctgcatcctctgtgttacctatgtcctcagtggcgtggagcag
ccgtcactgcagttctctctggaccagactaccgacagatatttgagctga
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