Scophthalmus maximus (turbot): 118287716
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Entry
118287716 CDS
T09850
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118287716 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118287716 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118287716 (myom1b)
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Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
Adeno_E3_CR1
baeRF_family7
Motif
Other DBs
NCBI-GeneID:
118287716
NCBI-ProteinID:
XP_035469079
LinkDB
All DBs
Position
16:complement(1580724..1607698)
Genome browser
AA seq
1640 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSKETESKMSQYQSSSRYSAGSSTSATSWSRGLKVSPYSGL
EESRLSPLPKRAKPTYLAVDKENQIIGYVVPIFRGSQEFATGFSDTEGARVRNMARRDLF
TSGLEMERSEQISRKEAMRESADRISLNKRIHEHEEHFKRMNEDSLMHAPEFVIKPRSHT
VWEKQCVRLHCTVSGWPDPRVVWYKNNVAIEPLANPGKYKLESRYSVHSLEINRCDFDDT
AQYRVSAMNSKGELSAFASVVVKRFKGEIDESLPAPRHGPVSEYGITFQTHIVDKFGVSF
GREGETMSLGCTVVIYPALHRYQPEVQWYKDDVLLCPSKWYQMHWSGDRATLTLTHMNKE
DEGLYTLRVTTKSGYETYSSYVFVRDADAEVEGAPGAPLDVRCLDANKDYIIVTWKQPAV
DGGNSILGYFVDRCEVGTTHWIQCNDTPVKFARFPVTGLVEGRSYVFRVRAVNKSGMSHP
SRVSDPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGRPLEPQVTEATKNYVVL
SWKPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYSFRVRCCN
SAGVGEPSDPTEATTVGDKLDIPSAPGKVVPTRNTDTSVVVSWEASHDAKELIGYYIEGS
IVGSNVWEPCNNKPVHATRFICHGLVTGETYVFRVRAVNAAGLSQFSQESEPVEVKAAIG
GGIPHGVLPEMGPGGNAGQLTEHRPRWTDTHETVQSLPDTKQKCNKKTQADTEAREGTRA
AGSSLTEPNPTGSKNKGGKRGSVSWAPDLLTDLAIESVSGSVSNSPIDIVTAAHLDPVTA
EVQEPAVEPANGPGAGQERKFSLDASANRETARPRSKSTASPTPPYGITVLECVRDSMVL
AWKQPTFIGGADITGYFVDYREVIDGVPGKWHEANIRAVSERAYRVSDLMENRKYQFQVR
AANMAGVGIPSLPSDTFLCEEWTIAVPGPPHDLQVREVRNDSLVLIWKPPVYQGRDLVNG
FYIDFKEADAPEEAWRGVNNKAEEKAYLKIKNLKEGEAYVFRVRAQNKAGVGKTSDVTEP
VPAVTKPGTKEIVVDVDDDGMISLNFECCDLTPDSKFVWSKNYEEITADSRLAVETKGNK
SRAVFNAPGEEDIGIYSCLVTHTDGASSSFNLSEEELKRLLEVSHNHKFPIIPLKSELAV
ELLEKGRVRFWLQAEKISADGKVDYVFNDNVISQGEKYKMNFDKNSGVIEMIMESLTPAD
EGTFTFQLKDGKATNQSSLVLIGDVFKELQKESEFQRKEWFRKQGPHFIEYLSYEVTPEC
CVVLKCKVGNMKKETSALWYKDGREIKADEHLGFTEGVLKLEIAQRDCPADTADADLIWR
RLKISKKDSGVYEVVLKDDRGKDTSTLNLTDQGFKELMNEVFSFIANSSTPLKITSTDEG
IRLYTFVNFYNDLLQVTWHYKDSAIAFSDRIKSCVVGEQLWLQITEPTEKDMGKYAIEFN
DGKGGLRRTVELSGQAFDDAFAEFKRLKAAAIAERGRARVAGGLPDVVTIQEGKALNLTC
NISGDPVPEVTWLKNDREITSDDHCILKFESGKFASFTITAVNTSDTGKYSILVKNKYGT
ESGDFTVSVFIPEEAGGKKK
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcgataccgttctaccagaagcaccatcgccactacgaccgtggctaccgt
agcaaggagacggagtctaaaatgagccagtaccagtccagcagcagatacagtgcgggc
agcagcacctctgccaccagctggagcagaggacttaaagtgtctccatactctgggctg
gaagagagcagactgagccccttacccaagagagccaagccaacttacttggctgtggat
aaagagaaccaaatcatcggctatgtagtgcctatcttcaggggaagtcaagagtttgct
acaggattttctgacacagagggagcaagggtgaggaacatggctcgcagggatttgttc
accagtggcctggagatggagaggtcagagcagatttccaggaaggaggccatgcgcgag
tcagctgaccgcatctctctgaacaaaaggatccatgaacacgaggagcacttcaagcgt
atgaacgaagacagcctgatgcacgccccggagtttgtgattaaacctcgctcccacaca
gtgtgggagaagcagtgtgtgcgactgcattgcactgtcagtggctggcccgacccacgg
gtcgtctggtacaaaaacaatgtggcaattgaaccccttgccaaccctggcaagtataaa
cttgagagcagatacagcgtgcattcactggagattaacagatgtgattttgacgacaca
gcgcagtatcgggtctctgccatgaactcaaagggagagctctctgcatttgcctccgtc
gttgttaagaggttcaaaggggaaattgatgagtccctgccagcgcccagacatggccca
gtgtccgagtatggcatcaccttccagactcacattgttgataagtttggtgtgtcattt
ggaagagagggggagaccatgagtctggggtgcacagtagtcatctaccctgccctgcac
cgttatcagccagaggtgcagtggtacaaagacgatgttctgctgtgtccatctaaatgg
taccaaatgcactggagtggagacagagccacactgacgctcacacacatgaacaaggag
gatgagggtctctacaccctgcgtgtcaccaccaagtctggatatgaaacctactcatcc
tatgtctttgtcagagatgctgatgctgaggtggaaggagctccaggtgcacctctggat
gttcgctgtctggatgccaacaaggactacattattgtcacttggaagcagccagctgtc
gatggtggcaactccatcctgggctactttgtggacaggtgtgaggttggaactacccac
tggatccagtgcaatgacaccccagtcaagttcgcccggttccctgtgaccggtttggtg
gagggccgttcttatgtcttccgcgtgcgtgctgtcaacaagagtggcatgagtcacccg
tccagagtatctgacccagtggctgccatggacccagctgaccgtgcccgcatgagaggt
acttccgccccctggaccggccaaatcattgtcactgaggaggagcctgcagagggcatt
gttccggggagacctcttgaaccacaagtgacagaggccaccaagaactatgtggtgctg
agctggaagccacctggggagaaaggcctggagggtgtcatgtactatgtggaaaagtgt
gtctctggcacagacagctggcagagggtgaacacagagatcccagtcaagtctccacgc
tttgcattgttcgatcttgccgaagggaagtcctacagcttccgcgtccgttgctgcaac
tctgccggtgttggtgaaccttctgacccgactgaggccaccacagttggcgacaagctt
gatatcccatctgcccctggcaaagttgttcccactagaaacacagacacatcagttgtt
gtgtcatgggaagcatcgcatgatgccaaagagttgattggatactacattgaggggagt
attgtgggcagcaatgtgtgggagccatgcaacaacaagcctgtacatgcaaccaggttc
atctgccatggtctggtgacaggagagacgtatgtattcagggtgagggcagtgaacgca
gcaggcctcagccagttctcccaggagtctgagcctgtggaagtgaaggctgctattggg
ggcggcatccctcatggtgtgttgccggagatggggccggggggtaacgcgggccaacta
accgagcacaggccacgctggacggacacgcatgaaactgtccagtccctccctgacact
aagcaaaagtgcaataaaaaaactcaggctgatactgaagccagggaggggaccagggct
gctggctcaagcctcacggagcccaaccccacagggagcaaaaacaaggggggcaagagg
ggcagtgtgtcctgggcccctgacctattaacagacctggccatagagtctgtgtcaggc
tcagtttctaactcacccattgacatagtcacagctgcacacttagacccagtcactgct
gaggttcaggagccggctgtagagccagccaacgggcctggggccgggcaggaacgtaag
ttctctttagacgcctctgctaatcgggagacagcgaggccaaggagtaagtcgacagcc
tcccctactccaccctatggcatcaccgtcctggagtgtgtgcgagactccatggtgttg
gcctggaaacagccaaccttcatcggtggtgctgacatcaccggctactttgtggattac
cgtgaggtcatcgatggcgtgccaggcaagtggcacgaggccaacatcagggctgtcagt
gagagggcctacagagtgtccgacttgatggaaaacaggaagtaccagtttcaggtgcga
gcagccaacatggcaggtgttggtatcccgtcactgcccagtgatacctttctatgtgag
gagtggacaatcgctgtaccaggacctcctcatgacctgcaggtgcgagaggtgcgaaat
gactcactggtgttgatatggaaaccacctgtataccagggccgagatctggtcaacggg
ttctacattgacttcaaggaagcggatgccccagaggaggcatggagaggggtcaacaac
aaggctgaggagaaggcatacttaaagataaagaatctgaaggaaggagaggcatatgtg
ttccgtgttcgtgctcagaacaaagccggtgtcgggaaaacctctgatgtgactgagccg
gtcccagctgtgaccaaaccaggcaccaaggagatagttgtggatgtggatgatgacgga
atgatctccctgaactttgaatgctgtgacctgacccctgactccaaatttgtgtggtcc
aagaattacgaggaaattacagctgactcccgcttggccgtagagaccaagggaaacaaa
tccagagctgttttcaatgcacctggagaagaggacattggcatttactcctgtctagtc
acccacactgatggtgcttcatctagcttcaatctctctgaggaagagttgaagaggctg
ctggaggtcagtcacaaccacaaattccccattattcccctgaagtcagagttggctgtg
gagctgctggagaaaggcagagttcgcttttggctgcaggcagagaagatttcagctgat
ggcaaagtcgattacgtgttcaatgataatgttatctctcagggggagaaatataagatg
aactttgacaagaacagcggtgtgattgagatgatcatggagtctctgaccccggcagat
gaaggcaccttcaccttccagttgaaagacgggaaggcaaccaaccagtccagcttggta
ctgataggagacgtgttcaaggagctgcagaaggaatcagagttccagaggaaagaatgg
ttcagaaagcaaggtccacactttatcgagtatttgagttatgaggtgacaccggagtgc
tgtgttgtgctgaaatgcaaggtgggcaacatgaagaaggagacctctgcgctgtggtac
aaagacggacgtgagatcaaagcagacgagcatctgggcttcacagagggagtcctgaaa
ctggaaatagctcagcgtgactgtcctgcagacactgcagacgccgaccttatctggaga
agactaaaaatttccaagaaggattctggtgtgtatgaggttgttctgaaggatgacaga
ggaaaggacacatccacgttgaacttgacagatcaaggtttcaaggaattgatgaatgaa
gttttcagttttatcgccaattcctccactccactgaagatcacaagcacagatgagggc
atccgactctacacctttgtcaacttctataacgatttactccaagtgacatggcactac
aaggattctgccatcgccttctctgaccgtataaagagttgtgtggtgggagagcagctg
tggctgcagatcacagagcccacagagaaagacatgggcaaatatgccatcgagttcaac
gacggaaagggcggcctgaggagaactgttgagctgtctggtcaagcatttgacgatgct
tttgcagaattcaagagactcaaggctgctgctattgcagagagaggtcgtgctcgagta
gcaggaggcttacctgatgtggtcactatccaggagggcaaggccctcaatctcacctgc
aacatttcgggtgaccctgtgccagaggtcacctggctaaagaatgacagggagatcaca
tctgatgatcactgcatcctgaagtttgagtccggcaaattcgccagcttcaccatcact
gccgtgaacacgtcggacactggcaaatacagcatcctagtgaagaacaagtatggcaca
gagagtggggacttcaccgtaagtgtcttcatccctgaagaggcgggcggcaagaaaaaa
tag
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