Scophthalmus maximus (turbot): 118287837
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Entry
118287837 CDS
T09850
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04060
Cytokine-cytokine receptor interaction
smau04217
Necroptosis
smau04620
Toll-like receptor signaling pathway
smau04621
NOD-like receptor signaling pathway
smau04622
RIG-I-like receptor signaling pathway
smau04623
Cytosolic DNA-sensing pathway
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118287837
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118287837
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118287837
04621 NOD-like receptor signaling pathway
118287837
04622 RIG-I-like receptor signaling pathway
118287837
04623 Cytosolic DNA-sensing pathway
118287837
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118287837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smau04052
]
118287837
Cytokines and neuropeptides [BR:
smau04052
]
Cytokines
Interferons
118287837
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF3038
FEZ
FUSC
Motif
Other DBs
NCBI-GeneID:
118287837
NCBI-ProteinID:
XP_035469301
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All DBs
Position
16:18127373..18129450
Genome browser
AA seq
186 aa
AA seq
DB search
MFNNSILFVCLCLGLYSAGSALSCRWMDHKFRQYSENSLDLLRTMAHNSTNSTEEAEVEE
TVAFPNDLYSQASKASAEDRLGFTVQVLDEVVVLFEEDHSSASWEERGVENFLNVVTQLA
DGLRSCLKSHSHKKKSKKLQMYFKRLSRHILERMNHSAESWELIRMEIQSHLLRTVPLVS
SLLTPN
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaacagcatcctgttcgtctgcctgtgtctcggtctgtacagtgcaggctcg
gcactgagctgcaggtggatggaccataagttcagacagtacagtgagaactctctggat
ctgctgcgtacgatggctcataactccactaactccactgaggaggctgaagtggaggag
actgtggccttccccaacgatctgtacagccaggcgtccaaagcttcagcggaggacaga
cttggtttcacggtgcaggtcctggacgaggtggtcgtcctgttcgaggaggatcacagc
tcggcatcatgggaggagagaggagtggagaacttcctcaacgtggtgacgcagctggcc
gacggccttcgctcctgtttgaagagccacagccacaagaagaagagcaagaagctgcag
atgtatttcaagagactctcgcgtcacatccttgagcgaatgaaccacagtgctgaatcg
tgggaactcatcaggatggaaattcaaagtcatctcctgagaacagtcccgctggtttca
tctctactcacccccaactag
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