Scophthalmus maximus (turbot): 118287852
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Entry
118287852 CDS
T09850
Symbol
stx4
Name
(RefSeq) syntaxin-4 isoform X1
KO
K13502
syntaxin 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118287852 (stx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118287852 (stx4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118287852 (stx4)
Membrane trafficking [BR:
smau04131
]
SNARE
Syntaxin (Qa)
Stx-PM
118287852 (stx4)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118287852 (stx4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Med9
DUF6584
K-box
ABC_toxin_N
Spc29
ETRAMP
DUF489
Lectin_N
Lzipper-MIP1
HrpB7
PilO
DUF3899
Motif
Other DBs
NCBI-GeneID:
118287852
NCBI-ProteinID:
XP_035469325
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Position
16:complement(19490818..19496627)
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AA seq
297 aa
AA seq
DB search
MRDRTKELGNNAEASDEEEEGRALMIKPGTSSAKEEKESEAFFKKVQEIHVGLQSLRRMV
SELENKQKTVLGEALPVESLKKELQTLRDEIKTMASHIQKKLKSVEPKKGEDDGKYIPIN
ARMQRTQHGVLSKEFVELMGYCNTIQAQYRDRNVERIQRQLKITGSNVSDEELDSMLESG
QTDVFTQNILIDAQATRQALNEIESRHDEILKLERSIRDLHDMFQYLAMEVEAQGEMVNR
VENNIKLSSNYVEKAKDNTEKAVTYQQKARKKKIWIAICLAILLLIIIISLVTTFGT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccggaccaaagagttgggaaataatgccgaggcgtcggacgaggaggaggag
ggccgagctctgatgatcaaacctggaacctcttcagccaaagaggagaaggagagtgag
gcctttttcaaaaaggtgcaagaaatccacgtgggtctgcagagtctccggaggatggtg
tcggagctcgagaacaaacagaagaccgtgctcggcgaagcgctgccggtcgagagtttg
aagaaggagctgcagactctccgagacgaaataaaaacgatggcgagccacatccagaag
aagctgaagagtgttgagcccaagaagggagaggacgacggaaaatatatccccatcaac
gcccggatgcagcgcacacagcacggtgtgttgtccaaggagttcgtggagctgatgggc
tactgcaacaccatccaggcccagtacagggaccgcaacgtggagcggatacagaggcaa
ctcaaaatcaccgggtccaacgtgtcggacgaggagctggattccatgctggagagcggg
cagacggatgtcttcactcaaaacatcctgattgacgcccaggccacgcggcaggcgctg
aacgagatcgagtcccggcacgacgagatcctgaagctggagcggagcatcagagacctg
cacgacatgttccagtacctcgccatggaggtggaggctcagggcgagatggtgaaccgg
gtggaaaacaacatcaaactgtcttcgaactacgtggagaaggcgaaggacaacacggag
aaggcggtcacgtatcagcagaaagcacgcaagaagaagatttggatcgccatctgtctg
gccatcctcctcctcatcatcatcatctcgctggtcaccaccttcggcacctaa
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