Scophthalmus maximus (turbot): 118287946
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Entry
118287946 CDS
T09850
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118287946 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118287946 (lrrc4bb)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
NGL family
118287946 (lrrc4bb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
LRR_1
LRR_14
V-set
Ig_2
LRRNT
Ig_6
DUF7617
Big_6
Motif
Other DBs
NCBI-GeneID:
118287946
NCBI-ProteinID:
XP_035469496
UniProt:
A0A2U9CN58
LinkDB
All DBs
Position
16:11429079..11438242
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AA seq
746 aa
AA seq
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MRVVMVTSPCTPFPLLWLVQLLLWFHNNGPHITEAAPPCPNPCTCSNQASRVICTRKSLD
QVPESISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGEEENSARQYINETFIEFPNP
TVQRGVGEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGTGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGNDGMGPVGILSN
KNHQGQDIPISCTPIPISTSNLLSTSGNGINTNPNSMSPPLPMSLPMPTMGLHGSIKGFM
GQNQNPQMEPLLFKGSSKENVQETQI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtacccctttccccctcctctggttggtccag
cttttgttgtggtttcacaacaatggacctcatatcacagaggcagcacccccctgcccc
aacccgtgtacctgctccaatcaggccagccgtgtcatctgtacaaggaagagtttagat
caagtcccagagagtatttcagagaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacttttaagcacctgcgacatttggaaatcctccagctctcc
aagaaccacatccgacagatagaggtgggagcattcaatggccttcccaacctcaacacg
ctggagctttttgacaaccgtctcacagttgtaccgtcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaacccaattgagacgctgccggcatttgccttt
catcgagttccctctttacgccgtcttgatttaggggaactcaggaagctggatttcatc
tcagaggctgcgtttgaaggtctggtaaatttacgcttcttgaatcttggcatgtgtggc
ttgaaagacatcccaaacctcaccccactagtacgactagaggaattggagctgtcaggg
aaccagctgggtattgtccggcctggatccttccagggcctggtgtcacttcgcaagcta
tggctaatgcactccagagtgtcagttatcgaacgcaatgcttttgatgacctcaaaaac
ctggaggagctcaacctctcccacaattccctgcattccttgccccatgacctcttcacc
cctttgcaccagctggagagggtacatctcaaccacaacccttgggtgtgtaactgtgat
gttctgtggctcagctggtggctgaaggaaacagttcccagcaacaccacatgttgtgct
agatgccatgcacctccaggtataaagggcaagtatattggggaactagaccagagtcac
tttacctgctatgccccagtgattgttgagccacccactgacctcaatgtcactgagggc
atggctgctgagctgaaatgtcgtactggaacatcaatgacctctgtgaactggttcact
ccaaatggcaccctgatgacgcatggatcataccgagttaggatctcagtgcttcacgac
ggaacactgaacttcacaaatgtgaccgtgcaggacaccggacagtacacttgcatggtg
accaactccgctggaaacaccactgcaaccgctgtgctcaatgtgtctgcgtcagatccc
agcaacagctacagttatttcaccactgtcactgtggaaacagtagagacagtaagagga
gaggaggaaaactcggcaagacagtatattaatgagaccttcatagagttccctaaccct
actgttcaaagaggggtgggagaggggagacctggcatcactatatctccttctctttcc
tctctttcctcactgtccccacgagccaacagagcaactgaaaatgcagtgactgtgtcc
ataatggatgtaactaacattccaggcctggatgatgtaatgaaaacaactaagatcatc
attggttgcttcgtggccattacttttatggcagctgtaatgttagtggtcttctacaag
ctccggaagcagcaccagctacataagcaccacggccctgccagagccatcgaaattgtc
aatgtagaagatgaaattggagccggggcaggaagtggcatctcaggtggttcaacgatg
aattctggcacaggtggagaaggaaccctgaggatacatcatccagaaatagtcaacctt
cccaacattggccgtacagacactctcaaccattactacaagacccatcatttcaacaac
aacgtgatgggtcttagtattggcaatgacgggatgggaccagtagggatcctgagtaat
aagaaccatcaaggccaggatatccccatttcttgcaccccaatcccaatctctacatct
aatttgctcagcacatcaggcaatggcatcaacaccaatccaaattctatgtccccaccg
ctgccaatgtcactccctatgcctactatgggcttacatggatcaatcaagggtttcatg
ggccaaaaccagaatccccaaatggagcctcttctcttcaaaggcagctcgaaggaaaac
gttcaagagactcagatctaa
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