Scophthalmus maximus (turbot): 118288128
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Entry
118288128 CDS
T09850
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118288128 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118288128 (faap100)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
118288128 (faap100)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
118288128
NCBI-ProteinID:
XP_035469848
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Position
16:9630722..9635627
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AA seq
866 aa
AA seq
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MEGRCAVETWAEFGFPDASRTPRITCARGTDVFICTGSDEVYVFDTQERKLTAVLQFPSP
VSDLVESHDKQLLYVSCGSGVYCVSFPFLLSRAQSSPADACSGPAEVKVPSEFLVVEQES
VSSLLLVGSVLLVLSQRDASWLLSLYKTAKEAQCSSYEMLSSFSLPLVSSGDTEGTGMRR
RPVLTCVHSGEPKSQSSSSASSSTLADSHFQLDPVLFKLLFGIEAALAKSPVVLCGLPDG
RLCFLPLRLPGARLRVLHSLEEPVAFVGLSVVEETCPGHAKCLVVVGEQGRVVLMKTVKG
GPEGGGTTAGFIEACVAGPVVCGSVDKHRLYYSTGSDLLVLDLSVGPSGRESRERDDDTS
SPTAAALTRPNSLNVCRVMALAAPAHNNAGEVQLLGLSVRGQLQAIVLPVVERRDEALSN
QPSAQVGRSVGDLLSAIGDVCQRVSVLKNAIKDKNQILRHLNQVLNVSFLLIASTNSEEH
RPGQEKPIRCRALTRWSRLLQKDSLNLTCVLDNSSPYVLEQGWTLSVTVFPVSYSPGAGE
ESSSTNFSFPFNYLHPGETLEVSLPLAAAGDTSFPMRVSCSLIFSLSSLLREEETIHLPG
LQRSCISLPLNTLTVDWLHALQVNNPTTHPINRNATSQSNHYPTDTVKAFLSSHRTRCSG
RGESGEKKAEREQHSARIRVSSELLRDTLVDTLEPQGPKLSSENLCISLLDWLLSEHPGG
GKIGQQGDRIALSSSCVHARGPNGDSVKLSAKEVHVGEESTGKEEHLSAVEVQLDSSSIA
TVCGLHHAVLSRIQALLQSAPERTASTVRVQSLGLREALKRAERLSEQIQQSRISGAFGM
GTSTGQMSRSLLAVYKELRENPLLII
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacgctgtgccgttgagacgtgggcagagttcggctttccagacgcttcccgc
acgccgaggatcacgtgtgcccgcgggacagatgttttcatctgcactggcagcgacgaa
gtctacgtcttcgatactcaagagagaaaactcacggccgtcctgcagttccccagtccc
gtgagtgacctggtggagagtcacgacaaacagctcctctatgtgtcctgtggaagtggc
gtttactgtgtcagctttccgtttctgctgtccagggctcagagctccccagccgatgca
tgctccggtccggctgaggtgaaggtcccctctgaatttctcgttgtcgagcaggaaagt
gtgtcatcgctgctcctcgtcggctctgtgctcctggtcctttcccagagagacgcgtcc
tggctgctgagtctgtacaaaacagcaaaagaagcgcagtgcagcagttacgagatgctc
agttcattcagtctaccactggtctcatctggtgacactgagggaacagggatgagaagg
aggcctgtgctcacttgtgtccattctggtgaaccaaaatcacaatcttcctcctccgcc
tcttcatcaaccttagcggacagtcatttccaactggaccctgtccttttcaaacttctc
tttggcatcgaagccgccctcgccaaatcgccggttgtcctttgtggcctgccagacgga
cgtctgtgcttcctccctcttcgtctcccaggtgcacggcttcgagtcctgcatagcctg
gaggagccagtcgcatttgtcggactgtccgttgtcgaggaaacgtgtccaggacatgca
aagtgtttggtggtggtgggtgaacaagggagggtggtgctgatgaagactgtcaaagga
gggccagagggagggggcaccacagctggtttcattgaggcgtgtgtagctgggcctgtg
gtgtgtggctctgtggataaacaccgtctgtactacagcactggttcagacctgttggtc
ctggatctgtcagtgggaccgtctgggagagagagccgggaaagggacgatgacacatcc
agtccgacagctgctgcgctcacaaggcccaacagtctaaatgtgtgtcgagtcatggcc
ttggccgcacctgcacacaacaatgcaggagaagtccagctgctggggctgtcggtcaga
gggcagctccaggcgattgtcttacctgtggtggagagaagggatgaagcgttatccaat
cagccttccgcgcaggtgggccgcagcgttggggatctcctgtctgctatcggtgatgtt
tgtcaaagagtatccgtgctgaaaaatgccatcaaggacaaaaaccaaattctgaggcac
ctgaatcaggtgctcaacgtcagcttcctgctgatagccagtacaaatagtgaagagcat
cgtcccgggcaggagaagccaatccgatgccgtgccttgaccaggtggagcagactgctc
cagaaagactctctaaacctgacatgtgtcctggataactcaagtccgtatgttttggaa
cagggctggacactgagcgtcactgtgtttcctgtgtcctactcaccgggcgcaggagag
gaaagctcctccacaaatttttcattcccattcaactatctccatccgggggaaacatta
gaagtgtcgctgccgcttgctgctgcaggcgacacgtccttccctatgagagtaagctgc
tcgctcatcttctcactctcaagtctcctgagagaggaggagaccatacaccttcctggc
ttgcagagaagttgcatcagtttgcccttgaacacactgaccgtagattggctgcacgcc
ctgcaggtgaataatcccacaacccatcccatcaacagaaacgccacatctcaatccaac
cactacccaacagacactgtcaaagcctttttaagctcacaccggactaggtgcagcgga
cgaggagagagtggtgaaaaaaaggctgagcgagagcagcattcagcgaggatacgagtg
tcatccgagctactcagggatacactggtggacactttggagccacaggggccaaagttg
tcctccgaaaatctctgcatctcgctgctggactggctgttgtctgaacatcctggcgga
ggaaagatcggacagcagggagacaggatcgctctgagcagctcatgtgtccacgctcga
ggtccaaacggagactctgtcaaactgagtgcaaaagaggtacatgtgggggaggagagc
acggggaaggaggagcacctgagcgcagtagaagttcagttagacagctcatccatagca
acagtgtgtggactgcaccatgctgtgttgagccggatacaggctctgttgcagagtgct
cctgagaggactgcttccactgtgagggtccagagtttaggtttaagagaggcacttaag
cgggccgagcgtctgtcagagcagatccagcaaagccggatatctggggcttttggcatg
ggcacgtccacagggcagatgagccggtctcttctcgccgtttacaaggaactcagagag
aaccctctccttataatttaa
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