Scophthalmus maximus (turbot): 118288204
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Entry
118288204 CDS
T09850
Symbol
rac1b
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1b
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04145
Phagosome
smau04148
Efferocytosis
smau04310
Wnt signaling pathway
smau04370
VEGF signaling pathway
smau04510
Focal adhesion
smau04520
Adherens junction
smau04530
Tight junction
smau04620
Toll-like receptor signaling pathway
smau04810
Regulation of actin cytoskeleton
smau05100
Bacterial invasion of epithelial cells
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118288204 (rac1b)
04310 Wnt signaling pathway
118288204 (rac1b)
04370 VEGF signaling pathway
118288204 (rac1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118288204 (rac1b)
04148 Efferocytosis
118288204 (rac1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118288204 (rac1b)
04520 Adherens junction
118288204 (rac1b)
04530 Tight junction
118288204 (rac1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118288204 (rac1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118288204 (rac1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118288204 (rac1b)
05100 Bacterial invasion of epithelial cells
118288204 (rac1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118288204 (rac1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118288204 (rac1b)
04031 GTP-binding proteins [BR:
smau04031
]
118288204 (rac1b)
Membrane trafficking [BR:
smau04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
118288204 (rac1b)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
118288204 (rac1b)
Macropinocytosis
Ras GTPases
118288204 (rac1b)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
118288204 (rac1b)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118288204 (rac1b)
Exosomal proteins of other body fluids (saliva and urine)
118288204 (rac1b)
Exosomal proteins of colorectal cancer cells
118288204 (rac1b)
Exosomal proteins of bladder cancer cells
118288204 (rac1b)
GTP-binding proteins [BR:
smau04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
118288204 (rac1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
118288204
NCBI-ProteinID:
XP_035469921
LinkDB
All DBs
Position
17:11169972..11175535
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLGAISYPQGLAMAKEIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
PAKKKKRICSLI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatcaagtgtgtcgtcgtcggagacggagctgtgggtaagacctgcctgctc
atcagctataccaccaatgcctttcctggagagtacatccccacagtgtttgacaactac
tccgccaatgttatggttgacgggaagccggtgaacctgggcctgtgggatacagccgga
caggaagattacgacaggctccgcccactgtcctaccctcagacggatgtgtttctcatc
tgcttttcacttgtgagccctgcgtcgtttgaaaacgtccgtgccaagtggtaccctgag
gtgagacaccattgtcccaacacccccatcatcttggttggcaccaagctggatctgaga
gacgacaaggacaccatagagaaactgaaggagaagaaactgggagcaatttcctatccc
caaggactggcaatggccaaggagattggttccgtcaagtacctggagtgctcagctctg
acccagcgtggccttaaaactgtgtttgacgaggccatccgggccgtcctctgccctcca
cctgccaagaagaagaagagaatctgctctctcatctaa
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