Scophthalmus maximus (turbot): 118288242
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Entry
118288242 CDS
T09850
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118288242 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118288242 (gspt1l)
03012 Translation factors [BR:
smau03012
]
118288242 (gspt1l)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118288242 (gspt1l)
Translation factors [BR:
smau03012
]
Eukaryotic type
Release factors
118288242 (gspt1l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
118288242
NCBI-ProteinID:
XP_035470006
UniProt:
A0A8D3EAD9
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Position
17:159781..181238
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AA seq
579 aa
AA seq
DB search
MDPRDTAPDSWEQEDDVEATIDTQLDPAFTALNVNAKPFVPNVNAAEFVPTFTMKTNSDN
LDSSVAVEKIPTTEVSESIDPVENGNTEMTTEEPWDQKEAEPNEEEPGGGPDEDRGPAVS
ATMEEPAPEMMEEEEEMPVPKIPPTQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTGM
VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVN
KMDDPTVHWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTDMCSWYT
GLPFIPHLDSLPHFNRSSDGPVRLPIVDKYKDMGTVVLGKLESGSISKAQQLVMMPNRHV
VEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagatactgcccctgattcctgggaacaagaggacgatgtggaggccaca
atcgacacacaacttgacccagcattcacagctctaaatgtgaacgcgaaacctttcgtg
cccaatgtaaacgctgctgagtttgttccgacttttaccatgaaaacaaactcggacaat
ctcgattccagtgttgctgttgagaaaatacccaccacggaggtgtcagagagcattgac
ccagtggagaacggcaacacagagatgaccacagaggagccgtgggaccagaaagaggct
gagccaaatgaggaggagccaggaggtgggcctgatgaggaccgggggccagcagtgtct
gcaacaatggaggaacctgctccagagatgatggaggaggaagaggaaatgccagtgccc
aagattccacctacacagccagatgcccccaaaaaggaacacatcaatgttgttttcatc
ggacacgtagatgctggcaagtccaccataggcggacaaatcatgtatctaacaggaatg
gtagacaagaggaccttagaaaagtatgagagagaagccaaggaaaagaatcgagaaacc
tggtatttgtcttgggctttggacaccaaccaagaggagcgggacaaaggcaaaacggta
gaggtgggccgagcatactttgagacggacaaaaagcactttaccatcctagatgctcca
ggccacaaaagctttgtgcccaatatgatcggaggtgcatcacaagcagacctggctgtt
ctggtaatctctgccagaaagggcgagtttgaaactggttttgagaagggtggacagaca
cgggagcacgccatgttggccaaaacggctggcgtcaagcatctgatagttctggtgaat
aaaatggacgaccctacagtccactggagccttgaaaggtatgaagagtgtaaggagaaa
cttgttccatttttgaaaaaggtgggcttcaacccaaagaaagatattcacttcatgccg
tgctctgggctgacaggagccaacctgaaggagcccactgatatgtgctcctggtataca
ggtttaccattcattccacacttggacagtttgccacatttcaacagatccagtgatggt
cctgtcagattgcccattgtagacaaatacaaggacatgggcacagtggttctgggcaaa
ctagagtcgggctccatcagcaaagcacagcagctggtcatgatgccgaacaggcatgtg
gtggaggtgttgagtctcttgtcagatgatgtggaaacagatgatgctggaccgggtgaa
aacctcaagttgcgactgaagggtattgaggaggaggagatcctgccaggctttatcctg
tgtaatgctgagaacctctgccactcagggcgcacattcgacgcccagatcgtcatcatt
gaacacaaatccatcatctgtccaggttacaacgcagtccttcacattcacacctgcatt
gaagaagtgcaaataacggccttaatctgtctggtggacaagaagtcgggagagaagagt
aaaacacgaccacgatttgtcaaacaggaccaggtctgcatcgcccgtctgcgcacagca
ggaaccatttgcctcgagacttttaaagactttcctcagatgggacggtttaccttacgg
gacgaaggtaagaccattgccatcggtaaggtgctgaagctggtcgcagagcgggactga
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