Scophthalmus maximus (turbot): 118288376
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Entry
118288376 CDS
T09850
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118288376 (mkrn1)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118288376 (mkrn1)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118288376 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-C3HC4
zf-CCCH_9
Cript
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
118288376
NCBI-ProteinID:
XP_035470289
LinkDB
All DBs
Position
12:1265771..1280497
Genome browser
AA seq
434 aa
AA seq
DB search
MAEAAAAASSAASGVTGGGWTKHVTCRYFMHGLCKEGDNCRYSHDLASSQPAAMTCKFFQ
NGNCVFGDRCRFEHCKPAKNEELPTPQMLPLPSVPLAGPSDPEPSGPTPGPGAQDWVNAA
EFVPGQPYCGRAEQAKVESSAPLIKEVDSDAAPDDKRLRKQLCPYAAVGECRYGINCAYL
HGDVCDMCGRQVLHPTDSGQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEK
VNPSERRFGILSNCCHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDK
EDKQKLIQKYKDGMGTKPCRYFDEGHGTCPFGSNCFYKHAYPDGRLEEAQPQRRKTVSNS
RNRTSRRTPLWDIFDERESTDSFDNDDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDL
FHEEELDDFYEIYL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcggcgtcctcggcggcttcgggagtcacaggaggaggctgg
accaaacacgtaacctgcagatatttcatgcacggactctgcaaagagggcgacaactgt
cgatactcccacgacctggccagcagccagcccgcagccatgacctgcaagttctttcag
aatggaaactgcgtgttcggggaccgttgcaggtttgagcactgtaaaccggcaaaaaac
gaggagctgccaaccccgcagatgctgccgctgccctccgtaccgctggctggcccgtcg
gacccagaacccagtgggccaacacctggtccaggggcacaggactgggtcaacgctgct
gagtttgttccaggacagccgtactgcggacgggctgagcaggcgaaggtggagagctcc
gcccccctcatcaaggaggttgacagcgacgcggcaccggatgacaagcggctgaggaag
cagctctgtccgtatgccgctgtcggcgagtgccgctacggaatcaactgtgcctatctc
cacggcgacgtgtgtgatatgtgcggccgccaggtgctccaccctactgacagcggccag
cgctccgagcacaccaaggcgtgcatcgaggcccacgagaaagacatggagatctcgttc
gccatccagcgcagcaaggacatgatgtgcggcgtgtgcatggaggttgtgttcgagaag
gtcaacccgagcgagcgccgcttcggcatcctctccaactgctgccactgctactgtcta
aagtgcattcgcaagtggaggagtgccaagcagtttgagagcaaaatcatcaagtcttgc
ccagagtgtcgaatcacgtccaactttgttatcccaagcgaatactgggtggaagataag
gaagacaagcagaaactcatccagaaatacaaggatggcatggggaccaaaccgtgtcga
tatttcgacgagggccacgggacatgcccctttggctcaaattgcttctacaagcacgcc
tatcctgatgggcggctggaggaagcgcaaccccagcgaagaaagacggtatccaacagc
agaaaccggacctcaagacgaacgccgctgtgggacatcttcgacgagagggagagcacc
gactccttcgacaacgacgacgaggagatggtgacgttcgagctgagcgagatgctcctc
atgctgcttgccgcaggaaccgacgacgaggtgacagactcagaggacgaatgggacttg
ttccacgaggaagagctggatgatttctatgaaatttacctatag
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integrated database retrieval system
