Scophthalmus maximus (turbot): 118288421
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Entry
118288421 CDS
T09850
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04080
Neuroactive ligand-receptor interaction
smau04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118288421
04081 Hormone signaling
118288421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118288421
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smau03310
]
118288421
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118288421
Nuclear receptors [BR:
smau03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
118288421
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118288421
NCBI-ProteinID:
XP_035470384
UniProt:
A0A8D3BUV6
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Position
17:3898418..3993785
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AA seq
416 aa
AA seq
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MEPMSNKQDSNSSEGDEKGWPDVPKRKRKNSQCSVKSMSALSVSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYEGCCIIDKITRNQCQLCRFKK
CISVGMAMDLVLDDSKRVAKRRLIEENREKRKREEMVRTLQIRPEPNTEEWDLIKLVTEA
HRHTNAQGSSWKQKRKFLSDDIGQGPMVPTSDGDKVDLEAFSEFTKIMTPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDTEVALMQAVLLMSSDRSGLTSVEKIEQCQEAYLLAFEHYIN
YRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPSELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatgtccaacaagcaggatagcaactcatcggagggggacgagaaagggtgg
ccagatgtgccaaagagaaagaggaagaacagccagtgttcggtgaagagcatgtctgct
cttagcgtctctgttccagggtacatccccagctacctggagaaggatgagccgtgtgtg
gtgtgcggggacaaggcgactggctaccactaccgctgcatcacctgcgagggttgcaag
ggtttcttccggaggaccatccagaaaaacctccacccggcgtactcctgtaaatatgag
ggctgctgcattattgacaagatcacccgcaaccagtgtcagctgtgccgctttaagaag
tgcatctctgtgggcatggccatggacttggtgttggatgattcgaagcgcgtggccaag
cgtcgtctgatcgaggagaatcgagagaaaaggaagcgggaggagatggtgcggacgctg
cagataaggccagagcccaacacggaggagtgggacctgatcaagttggtgaccgaggcc
caccggcacaccaatgcccagggctccagctggaaacagaagcgcaagttcttgtcggat
gatattggccagggtcctatggttcccacctccgacggcgataaagtggacctggaagcc
ttcagcgagttcaccaagatcatgacacccgccataacgcgcgttgtcgacttcgccaag
aaattgcccatgttctcagagctgccttgtgaagaccagatcatcttgctgaagggctgc
tgcatggagatcatgtcactgcgcgccgccgtacgctacgatccggagagtgagacgctg
acgctaaacggcgagatggcggtgaaacgtgagcagctgaagaacggcgggttgggcgtg
gtgtcggacgccatctttgatctgggcaagagcctggctcagtttaacctggacgacacg
gaggtggcgctgatgcaggccgtgctgctcatgagctcagaccgttcagggctgaccagt
gtggagaagatcgagcagtgccaggaggcctacctgctggcgttcgaacactacataaac
taccgcaagcacaacattccccacttctggcccaagctgctcatgaaggtgacggacctg
cgcatgatcggagcgtgccacgccagccgcttcctccacatgaaagtcgaatgccccagc
gaactctttccgccgctcttcctggaggtctttgaggaccaggaagtgtga
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