Scophthalmus maximus (turbot): 118288453
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Entry
118288453 CDS
T09850
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04136
Autophagy - other
smau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118288453 (wipi1)
04136 Autophagy - other
118288453 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118288453 (wipi1)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118288453 (wipi1)
Membrane trafficking [BR:
smau04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118288453 (wipi1)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118288453 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR55
Beta-prop_EML
Beta-prop_RSE1_2nd
Beta-prop_NWD2_C
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_Vps41
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
118288453
NCBI-ProteinID:
XP_035470446
UniProt:
A0A8D3AU04
LinkDB
All DBs
Position
17:complement(517138..549437)
Genome browser
AA seq
457 aa
AA seq
DB search
METAEGAGGPGGPDGSGHRFGCASFNQDSTSLALGTKAGYKLFSLTMVEKLDCIHESVET
PDVYIVERLFSSSLVVVVSTAMPQRMNVYHFKKGTEICNYSYPDNILAVKLNRQRLVVCL
EESIYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSATIGEIIMYDANNLN
TVTTIPAHDSPVVALAFNSSASKLASASERGTVIRVFSVPEGLRLFEFRRGMKRYVSIRS
LSFSPDGQFLCASSNTETVHIFKLEHLGPSEGDEAATWTAYVGKMFSAASSYLPSQVSGM
MSQDRAFAIVHLLSSEQRNVCTLAMIQKLPRLLVATTSGHLFIYNVDPLDGGECMLAQKH
RLFGIDDDQGESKESEGSEITGPAQACPSYAATAALPASRPVTATLTGYSEDGGAKKGEV
IPEHEFAAGPVCLDDENEFPPINWCRDGTGGGLGRRS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcagagggagctggtgggcctggcggaccggacggatcggggcaccggttt
ggctgcgcctctttcaaccaagactccacgtcactggctttgggaacaaaggctggctac
aagctgttttctctgaccatggtggaaaaactggactgcatccatgagagtgtagagact
ccagatgtttacatcgtggagcgtctgttctccagcagtctggtagtcgtggtgagcacc
gcaatgccgcagcgaatgaacgtctaccacttcaagaaagggacagagatctgcaactac
agttaccccgacaacatccttgctgtcaagctcaacagacagagactcgtggtgtgcctt
gaagagtccatttatatccacaacatcaaagacatgaagctgctcaagactctgcttaac
actccgtccaacccctcaggtctctgtgctctttctatcaatcattccaactcctacctg
gcttaccccggcagtgccaccattggggaaattataatgtatgatgccaacaatttgaac
acagtgacaacgatcccagctcacgacagtcctgtggtagctctcgccttcaactcctcg
gcgagcaaacttgccagcgcctcagagagaggcaccgtcatccgagtgttctccgttccc
gagggcctgcgtctgtttgagtttcgccggggaatgaagaggtacgtcagtataaggtct
ttatccttcagccctgatggccagttcctttgtgcttcaagcaacacagagacggtgcat
atctttaaactggaacatctgggaccaagtgaaggggatgaggctgccacctggacagcc
tatgtagggaagatgttctcagcagccagcagctacctcccttctcaggtatccggtatg
atgagccaggaccgggcctttgcaattgttcacctcctctcgtctgaacagaggaacgtc
tgcaccttggctatgatccagaagcttccgcggctgctggtggccacgaccagtggccac
ctattcatctataacgtggatccactggacggaggcgagtgcatgttggcccaaaaacac
aggctgtttggcattgatgatgaccagggtgaaagcaaagagtcagaagggtcagagatc
acagggccagcacaggcctgtccatcctacgctgcgacggctgccttaccagcctccaga
cccgtcactgccactctcacaggctattctgaggatggtggagcaaagaaaggcgaagtc
atcccagaacacgagtttgctgctggacctgtgtgtctggacgacgagaacgagtttcct
cctattaattggtgccgcgacgggactggaggtggcctggggaggcgctcgtga
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