Scophthalmus maximus (turbot): 118288455
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Entry
118288455 CDS
T09850
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04144
Endocytosis
smau04517
IgSF CAM signaling
smau04519
Cadherin signaling
smau04530
Tight junction
smau04810
Regulation of actin cytoskeleton
smau05100
Bacterial invasion of epithelial cells
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118288455 (zgc:86896)
04519 Cadherin signaling
118288455 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118288455 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
118288455 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118288455 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118288455 (zgc:86896)
05100 Bacterial invasion of epithelial cells
118288455 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118288455 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118288455 (zgc:86896)
Membrane trafficking [BR:
smau04131
]
Others
Actin-binding proteins
Arp2/3 complex
118288455 (zgc:86896)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
118288455 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
118288455
NCBI-ProteinID:
XP_035470451
UniProt:
A0A8D3ATV7
LinkDB
All DBs
Position
17:complement(551718..559497)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAVSPNNNMVDIYERKGKDWLKIHELSEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGMWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKPILSTVLSLDWHPNNILLAAGSADLICRVFSAYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSITVVDAAQKKEVTQL
TTNRLPLMSVLYVSPTEIVAAGHDCCPYQFTYKGPDALEFVKKLDIPKQTSRGSLSAMEH
FRNLDKKATDEDNSELGTLHQNSITQLCLVSGEKAKVEKYSSVSLDGAIVIWDFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctacagttttggcctggagccgctctcctgccacgcctggaacaaagacagg
acccagattgcagtgagtcctaacaacaacatggtggacatctatgagaggaaaggaaaa
gactggctcaagatccatgagcttagtgagcacagtggacgaatcacaggcattgactgg
gccccagagtccaaccgtattgtgacatgtgcctcggaccgcaacgcttacgtgtggact
ctgaaggatggcatgtggaaacccacgctggtcctggtgcgcatcaaccgtgcggccaca
tgtgtaaaatggtcaccactggaaaacaagtttgccttgggcagcggagctcgtctcatc
tctgtctgctactttgagaaggaaaacgactggtggctgagtaagcacatcaaaaagcct
attctttccacagtcctgagtctggactggcatcccaacaacatcctactggcagccggg
tctgcggaccttatctgcagggttttctctgcctacatcaaggacatcgaggacaagcct
ggacccactgcctggggggccaagatgccttttggggaggtgctgctggagcataaggac
tgtgggggctgggtgcacagtgtatccttctcccctagtggagatcagctggcgtgggtg
gcccacaacagcagcattactgtggttgatgctgcccagaagaaggaggtaacccagctg
actactaaccgtctgccgttgatgagcgtgctctacgtcagccccactgagattgttgct
gcgggtcatgactgttgcccataccagttcacctacaagggccctgatgcccttgagttt
gtgaaaaagctggacatccccaagcagacgtctaggggaagcctgtcagccatggaacac
ttccgcaacctcgacaagaaggccactgatgaggacaacagcgagctgggcacccttcac
cagaacagcattacgcagctgtgtctcgtatcaggggagaaagctaaagtggaaaagtac
agtagtgtgagtctggatggagccatcgtgatatgggattttaagcattga
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