Scophthalmus maximus (turbot): 118288563
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Entry
118288563 CDS
T09850
Name
(RefSeq) cysteine protease atg4da isoform X2
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04136
Autophagy - other
smau04140
Autophagy - animal
smau04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118288563
04140 Autophagy - animal
118288563
04136 Autophagy - other
118288563
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118288563
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118288563
03029 Mitochondrial biogenesis [BR:
smau03029
]
118288563
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
118288563
Membrane trafficking [BR:
smau04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118288563
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118288563
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
118288563
NCBI-ProteinID:
XP_035470706
LinkDB
All DBs
Position
17:5385767..5391793
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AA seq
460 aa
AA seq
DB search
MNPSVSSSRCEGLSPADNHMDDWHMVSSESALPQVLEVSRDEQEAEDRGKLRSKLVSAWN
SVKYGWTLKQKSKFNRSSPVIMLGKSYELKDQGERECFRHSFVSLLWLTYRRGFPPLAGG
SLTTDSGWGCVLRTGQMLLAHGLLLHLMPPGWTWSVSHHAVKDDMDLESRPADSGQSSQE
WPGKRVRKLSLGSLLVRPMEATHRRTVSWFADRPTAPFGIHRLVALGKSSGKKAGDWYGP
SIVAHILQKAVAASADLPNLVVYVAQDCTIYLEDVKRLCEQPPPQPWKSVIVLVPVRLGG
QELNPAYITCVKKLLTLQCCIGIIGGKPKHSLFFIGFQDDNLLYLDPHYCQPTVDIAEEN
FPLESFHCKYPRKMAVSRMDPSCTIGFYAKGQKDFESLCTVVTEALSTSAETYPMFIFAE
GHGQEEERSNTPTNNIAYIQRTSERRRVDTSNSMDEFVLL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcgtgtcctcgtcccgctgtgagggcctgtcccctgcggacaaccacatg
gacgactggcacatggtctcctccgagtctgcactgcctcaggtcctggaagtcagcaga
gatgagcaggaggcagaggacagaggcaaactcagatccaagttggtctcggcatggaac
agtgtcaaatatggctggaccttgaagcagaaatccaaattcaacaggagctctcccgtg
atcatgcttggaaaatcctatgagctcaaggatcaaggggagagggagtgtttccgccac
agctttgtgtctctgctgtggttgacgtacagacgggggttccctcccctggccggcggc
tctctgaccaccgacagcggctggggttgtgttctgcgtacggggcagatgctgctggcg
cacggcctcctcttacatctgatgccaccaggttggacttggtctgtgagccaccatgca
gtcaaagacgacatggacctagagagtcgccccgcagacagtggacagagttcccaggaa
tggcctggtaaaagggttcgaaaactgagcctgggttccctgctggtcagacccatggag
gccacacacaggaggacggtgtcgtggtttgcagaccgccccacggccccgttcggaata
caccgactggtggcattgggcaaaagctcggggaagaaagccggggactggtacggtccc
tccatcgtggcacacatcctccagaaagctgtggcagcatcggcagaccttcccaatcta
gttgtctatgttgcacaggattgcaccatctacttagaggatgtgaagaggttgtgcgag
cagcctccccctcagccctggaagtccgtcatcgtcctggttcctgtgcgacttggagga
caagagctcaaccctgcctacatcacctgtgtcaagaaactcttgacattacaatgctgc
atcggaatcatcgggggcaaaccaaagcactctttgttcttcattggcttccaagatgac
aatctgctgtacctggacccgcactactgtcagcccacagtggacatcgcggaggagaac
tttcccttggagtccttccactgtaaatatcccaggaaaatggcagtctcacgcatggac
cccagctgcaccataggattctatgctaaaggtcaaaaggactttgaatcattgtgcaca
gttgttactgaggctctctccacatctgcggagacgtaccccatgtttatatttgcagag
ggacatggtcaggaagaggagcgaagcaatacacccacaaacaacatcgcctatatccag
aggacgagcgagcggaggcgagttgacaccagcaacagcatggatgagtttgttctatta
tga
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