Scophthalmus maximus (turbot): 118288662
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Entry
118288662 CDS
T09850
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118288662 (cacna1ha)
04020 Calcium signaling pathway
118288662 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118288662 (cacna1ha)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118288662 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
118288662
NCBI-ProteinID:
XP_035470872
LinkDB
All DBs
Position
17:complement(8176566..8273673)
Genome browser
AA seq
2538 aa
AA seq
DB search
MTDGEGRARFQYPECQEEEAQDEVRLAIPTPRRNDAPGHDVDPGGGPDEEEGEDEEGEVD
RWRRSSSGRGERVDGWSPELQEHEGQEPELEVEVGPTLGVRIREPIRDPDCVSEEEEQQP
YPALAPVAFFCLKQTTRPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFRPCEDVTCQSE
WCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSLDGH
NASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQL
WAGLLRNRCFLGEDIITMYNLSMSSYYMTEDGEDSPFICSAPRENGMLRCHDVPPFSEGR
AECSLAAPHQSSALIGSAPVVGGASVNGCVNWNQYYNVCRQGNHNPHKGAVSFDNIGYAW
IAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQR
ENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWHSKRRK
KVNPNGSGGGSNGGGNGHGHGSSRGCGGSGPNSALWLRPIHNLLHNHQHQHCRHSNGGQH
IIGVGTAEHMEREGGIGGGGGEELEMDSLPVRRGSNHEYNSGGGSGGHSDGVTHGMGVLL
GRLNGGMNYPTILPSFVCSYSSKTPPPHSQQCRPSPEQHPPNHPVCEHTETLNKLYQLMG
QHSRQRLLYQLAGVVPSPLLLELLSCPLCARSLETLELELGDLDGGRGDPDGLHDFPQGG
DLRGGRGRSRRRGVVEYKNGGVRAWINFRDKLKRIVESKYFNRGIMIAILVNTLSMGIEY
HQQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIG
QADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGM
HLFGCKFSLQMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALY
FVALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKM
YSLMMTANGHVDPRGSMAPPIIMRTAATPMPTPKSSLGPESILGEELMGMPRYGEVGLGF
PETGTGHAESRRGSATSMDPLAYDQHSLSLSSPGRRSPLSPRGPGSSWGSRRSSWNSLGR
APSLKRRDTSGERESLLSGEGGEEEYGGEDKGEAGGNNRLRPGSLELLQASTLLPSIIAE
YGDCNGRTLTYDTNMSSDAKEDSSPEDDMDDDSSFCFWIKKELRNMKPRWCKEHEDWTLY
LFSPESIFRAWCQSVISHKMFDHVVLVFIFLNCITIALERPDIQPHSTERVFLGVSNYVF
TVIFLAEMAIKVVALGFCFGKQSYLQSSWNVLDGLLVFVSLVDILVSLAYTGGNRILGIL
RVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGK
FYHCEGLDTKNVTNKSDCLQANYRWIRRKYNFDNLVQALMSLFVLSCKDGWVNIMYDGLD
AVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEESRLREE
KRQKMIEKKRRSKENGGAEAKQRPYYADYSPLRLSIHTLCTSHYLDLFITFIICINVFTM
SIEHYNQPQYLEEVLKYCNYVFTCIFVIEALLKLVAFGIHRFFKERWNQLDIAIVALSIM
GITLEELKMNAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGL
LFMLLFFIYAALGVELFGKLDCTEDNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIM
KDTLRECHADDRHCLSYLPLVSPIYFVTFVLMTQFVLVNVVVAVLMKHLEESNKEAKEDA
EMDAEIALEMAMERQRKLSTTSNGSSVEGAYVGPCPQSPGQEEEVQYEDPDLLSTRKMSV
SRMHSLPNDSYMFRPVRPTSAPYPLEEVDLSPQHQHSGSVTSVRSQPCESRALLQVPDVS
PVHPRPPPTFILPRIAPPTPSPSPRALRRQVAVKVDSVESQVCEKQERPNPAHLPSPSPS
PLPPHPSSPSPIPPPPPSSPSSLSLTPCSPTAVPLPPASPSPLPPPPSSPSLLLPPPPSP
RLPLRPPSLRRPRPPSAASFCDPADEEVYHITISARHRRRDEEGQESRGKAGRSHSLSPY
TSPYSLDSSPPPPPPLLPSSSKSTLSLLQAGLKDRDFRKGLSVVNQGFLDKPSSLSVGYP
DDHRRHSIEVCLPQAVIASDDLPFTQEANGSERGGKAFPVRVQSVGGGHRKKKMSPPCIS
IHPPSEKEQPQGASPPKLADCSMMLRRRTPSYDLTPHTQSKTHTQDVSADAQMPSPMHAA
LTPIHSPLQAHSPTHTLTPSRGSTPTHAQSYTPPHPPTPTHQHIPISPHIFIQPHAPLVP
NTLPFAQTRSLSPAARHPSLTGDYIPLPQFTFDEPQSRYMSGLSAGRSDADSATCSSPFD
NRLGSGAGFSAKNRRTAQ
NT seq
7617 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagggtagagcgcgctttcagtacccagagtgccaggaggaggaggcg
caggacgaggtgaggctcgccataccgacgccccgcaggaatgacgccccgggtcacgac
gttgaccccggcgggggccctgatgaagaagagggggaggacgaggagggagaggtggat
aggtggaggaggagcagcagtggtcggggagaaagagtggatggatggagtcctgagctt
caggagcacgaggggcaagagccggagctggaggtggaagttggaccaacgctgggagtt
cgcatcagggagcctatccgtgatccggactgtgtctccgaggaggaggagcagcagccg
tacccggccctggcgcccgtggctttcttctgcttgaaacaaacaacgaggcctcggaac
tggtgtcttcgcgtcgtctgtaacccgtggttcgagcacgtgtccatgctggtgatcctg
ctcaactgtgtgactctgggcatgttccggccctgtgaagacgtcacctgccagtcggag
tggtgccgcatcctacaggtgttggacgactgtatctttgctttcttcgctgtggaaatg
gtcatcaagatggtcgccctgggaatctttggccccaattgttacctgggtgacaagtgg
aaccagcttgactttgtcattgtcatggcaggggtgatggagtactccctggacggccac
aacgccagtctgtcagccattcgtaccgtccgagtgctcaggccactgcgggcaatcaac
agagttccaagtatgcggatcttggtgacactgctgttggacactctgcccatgttagga
aatgtccttctcctctgcttctttgtctttttcatcttcggcattgtgggagtccagctg
tgggcgggacttctgcgcaaccgctgcttcctgggagaggatataataacaatgtacaac
ctgtccatgagttcctactacatgaccgaggacggtgaagacagcccatttatctgctcg
gctccccgtgagaacgggatgctgcgctgccacgatgtgccgcccttctcagagggcagg
gccgaatgttcactggcggcgccacatcaaagttcggctctgattggatcagctcctgtg
gtgggaggggccagtgttaacggctgcgttaactggaaccagtactataatgtgtgtcga
caaggaaaccacaaccctcacaagggagctgttagcttcgacaatattggttacgcctgg
attgccatattccaggtcatcaccctggaaggatgggttgatatcatgtactatgtcatg
gatgcacactccttctacaattttatatattttatactgctcataattgtgggctcattc
ttcatgatcaacttgtgcctcgtggtcatcgccacccagttctccgagacaaagcagagg
gagaacgccctgatgagggagcagcgtgcgcgctacatgtccaacgactcgacgctcgcc
agctacagcgaaccaggctcctgctatgaggagatgctgcgctacatcagtcacctttat
cgcaagttcacacggcggctgcagaggatatactctgggtggcacagtaaacgacgtaaa
aaggtgaatcccaatggcagcggcggaggcagcaacggtgggggtaatggacatggccac
ggttccagcaggggctgcggcggatcagggccaaacagcgcattgtggctgaggccgatc
cataaccttctgcacaaccatcagcaccagcactgtcgccacagcaacggggggcagcac
attatcggtgtgggaactgctgagcacatggagagagaaggaggcattggaggaggagga
ggggaagaactggagatggattcgcttcctgtccgcagaggaagtaaccatgaatacaac
agtggtggcggcagcggcggccactcagatggcgtcacccatggcatgggggtcttgctt
gggcggctgaatgggggaatgaactacccgaccattctcccatcttttgtgtgcagctac
agcagcaagactcctccgcctcactcccagcagtgcaggcccagtccggagcagcacccg
ccgaatcacccagtgtgtgaacacacagagacactgaacaagctctaccagctcatggga
caacacagtcgccagaggctgctgtaccaactggcgggcgtggtgcccagccctctgctc
ctggagctgctcagctgccctctgtgcgcccgcagcctggagaccttagagctggaactg
ggagacctggacggaggtagaggagaccccgacggactgcacgacttcccccagggagga
gatctgagaggtggaaggggtcggagcaggcggcgaggggtggtggagtacaaaaacgga
ggggtccgggcctggataaacttccgagataaactgaagaggatcgtggagagtaaatac
ttcaatcgggggatcatgattgctatcctggtcaatactctcagcatggggatagagtac
caccagcagcccgaggagttgactgatgtgctagagatcagtaacatagtcttcaccagc
atgtttgtcttggagatgggcttcatgctgctggctttcggcctgtttggatacatcagg
aacccgtacaacatattcgatagcatcatcgttatcatcagcgtgtgggaaatcatcggc
caggcagacggcgggctgtcagtgctgcggacgttccgtctgctgcgggttctgaagctg
gttcgcttcctgcctgccctgaggcggcagttggtcgtgctgatgaaaaccatggataat
gtggccaccttctgcatgctgctgatgctttttatcttcactttcagtatactgggtatg
catctgtttgggtgtaaattcagtctccaaatggagaacggagacacaatccctgaccgc
aagaactttgactctctgctctgggccattgtcacggttttccagattctcacccaggag
gactggaacgtggtgttgtataatggcatggcctctacctctccgtgggcagccctctac
tttgtcgctctcatgacattcggcaactatgtgctcttcaacttgctagtggccatcttg
gttgagggcttccaggctgagggtgatgctaataggtcggagtcagatgatgagaagaaa
tcggacaactttgaggaggatgaaaaggtggaacagctcagagacacagagctgaagatg
tactctctgatgatgacagccaacggccacgtcgaccctcgcggctcgatggctcctcct
ataatcatgcggacggcagccacacccatgcccaccccgaagagctctctgggacctgag
tccatccttggggaggagctcatggggatgccgcgatatggcgaggtgggacttggattt
cctgagacgggaactggtcacgcagagtctcgccgtgggagcgccacctccatggacccc
ttagcttatgaccagcattcgctgagcctctcaagtcccggccgccgctccccactttca
ccccgtgggcctggcagctcctggggaagccgccgctccagttggaacagcctgggaaga
gcgccgagcctcaaaaggcgagacaccagtggagagagggagagcctgctgtccggggag
ggaggagaggaagaatatggcggggaggacaagggggaggccgggggaaacaacagactg
cggccgggctccttggagctgctgcaggcatctactctcttgccttccatcatagcggag
tatggcgactgtaatgggaggaccctgacttatgacactaacatgagctcagacgccaag
gaagattcctcgcctgaagacgatatggacgatgatagttccttttgcttctggatcaag
aaggagctccgcaacatgaagccccgctggtgcaaagagcacgaagactggactctgtat
ttgttttctccagaaagcatattccgtgcctggtgccaaagtgtgatctcccacaaaatg
ttcgaccatgtggttctagttttcatcttcctcaactgcatcaccattgctctggagagg
cctgacatacagccgcacagcacggagcgagtgtttctgggtgtgtccaactacgttttc
actgtgatcttccttgcagaaatggccataaaggttgtagctctcggcttctgcttcggg
aagcagagctacctccagtccagctggaacgtcctggatggtttgctggtgtttgtgtcc
ctggtcgacattctggtctctctggcctacacgggcggaaacaggatcctgggcatcctg
cgagtcctgcgacttctgcgaacactgcgtccactcagggtaatcagtcgagccccggga
ctgaagctggttgtggagactctcatcacctctctcagacccatcgggaacattgtcctt
atctgctgtgctttcttcattgtcttcggcatcttgggggttcagctattcaaagggaag
ttctaccactgtgaaggtctggacacgaaaaatgtcaccaacaagtcagactgtctgcag
gcaaattaccgctggatccgaaggaagtacaactttgataacctggtccaggccctgatg
tccttgttcgttctgtcgtgtaaggacggctgggttaacataatgtacgatgggctggat
gcagtgggagtggaccaacagcctgtgagaaaccacaacccctggatgctgctctacttc
atctccttcctgctcatcgtcagcttcttcgtcctcaacatgtttgtcggcgtggtggtg
gagaacttccacaagtgccggcaggaccaggaagaggaggagtcccgcttgcgggaagag
aagaggcagaagatgatagagaaaaagcgcaggagtaaggagaatggaggggctgaggcc
aagcagaggccttactatgcagactactcgcccctgcgtctgtccatccacacactgtgt
accagccactacctggacctcttcatcaccttcatcatctgcatcaacgtcttcaccatg
agcatcgagcactacaatcaaccgcagtatttagaggaggtcctgaagtactgcaactac
gtgttcacctgcatcttcgtcatcgaggccctgctcaaactcgtggcatttggcatacac
aggttcttcaaagaaaggtggaatcagctggatatagccatagtggcactgtccatcatg
ggcatcaccctggaggagctgaaaatgaacgcagcactgcccataaaccccaccatcatc
agaatcatgagggtgctcagaatagcaagagtactaaagcttctgaagatggccaaaggg
atgagagctctgctggatactgtcatgcaagcactgccacaggtggggaatcttggtctc
ctcttcatgctgctcttcttcatctatgctgccctgggagtggagctctttggcaaactg
gattgcacagaggacaacccgtgtgagggcttgagtcgtcacgcaacctttgaaaatttt
gggatggccttcctcacactgttccgcgtgtccaccggagacaactggaatgggattatg
aaagacacattaagggagtgccatgcagacgaccgccactgtctctcctacctgcccttg
gtctctcctatttactttgtaaccttcgtgctcatgacccagtttgtgctggtcaatgtg
gtggtggctgttttgatgaaacatctagaggaaagcaacaaggaggccaaagaggatgca
gagatggacgcagagatcgccttggaaatggctatggagaggcaacgcaaactgagcaca
acctccaacggcagctcggtggaaggagcctatgttgggccatgtccacagtcacctggg
caggaggaagaagtccagtatgaagacccggacctgctgtcgacgaggaagatgtccgta
tccaggatgcactctctgcctaacgacagctacatgttccgacctgtgcgacccaccagt
gctccctaccctctggaggaggtggacctcagtccccagcaccagcattcaggctcggtg
acgtcggttcgctcacagccgtgtgagagtcgcgctctgctgcaggtgccagacgtttcc
cccgttcaccccaggccacctcccaccttcatcctgccacgcatcgccccgcccacgccc
agcccctctccccgtgccctgcgcagacaggtggccgttaaagtggattcggtcgagtcc
caggtttgcgaaaaacaggagcggccgaaccccgcccatctgccttccccgtccccttct
cccctgccccctcatccttcctcaccatctcccattcctcccccacctccttcctcccct
tcatccctctccctcacaccctgctcacccactgccgtcccacttcctcctgcttctccc
tctcctctgcctcctccgccgtcttccccctcactccttctcccgccaccgccctccccc
cgtctccccctgcgaccccccagccttcggagacccagaccgccctctgccgcctccttc
tgcgacccggccgatgaggaggtgtatcacatcaccatctcagcccgccacaggcggaga
gatgaggaggggcaggagagcagagggaaggccggccgcagccactccctctccccttac
acctccccgtactctctcgactcctcgccccctcctcctcccccacttctgccttcctcc
tcgaagagcacactcagtctgctccaggctggattgaaggaccgtgactttaggaagggc
cttagtgtcgtcaaccagggctttctggacaagccatcatcgttgtctgttggataccct
gacgaccatcgccgccactccatcgaggtctgcctcccacaggctgtcatcgccagtgat
gacctcccctttacacaagaggccaacgggtcagagaggggcggcaaggcatttcctgtg
agggtgcagtcggtcgggggcggccacagaaagaagaagatgagtcctccctgcatatcc
atccacccgccctcagagaaggaacaaccccaaggcgcctctcccccaaaactggctgac
tgcagcatgatgctgagacgcaggacaccctcctatgacttgaccccacacacacagtca
aaaacgcacacccaggatgtatcggcggacgcacagatgccctccccgatgcatgcagca
ctaacacccatccactcaccactgcaagcacactcgccaactcacacactgacgccctcg
cggggatctactccgacgcacgctcagtcgtacactccaccgcacccacccacgcccaca
catcaacacatccccatcagtccgcacatcttcatccagccccatgcacctctcgtccca
aacactctgcctttcgcacagacacgctccctctccccggctgcaaggcacccgtctctc
acgggggactacatcccgctcccccagttcaccttcgacgagccacagtccaggtacatg
agtggcctgtcggctggccggtcagacgctgactcggccacctgctcttcccctttcgac
aacagactgggaagtggtgcaggattcagtgcaaagaaccggagaaccgcccagtga
DBGET
integrated database retrieval system
