Scophthalmus maximus (turbot): 118288834
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Entry
118288834 CDS
T09850
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X4
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118288834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118288834
03036 Chromosome and associated proteins [BR:
smau03036
]
118288834
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118288834
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118288834
PBAF complex
118288834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CIS_TMP
DUF6739
Motif
Other DBs
NCBI-GeneID:
118288834
NCBI-ProteinID:
XP_035471240
LinkDB
All DBs
Position
17:complement(3379535..3388886)
Genome browser
AA seq
499 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPSTPGFVGYNPYSHLAYNNLRLGGSSGGSSRNATGITVPKP
PKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYEAE
KIEYNDSLKAYHNSPAYLAYVNAKNRAEAAMEEESRQRQSRMDKGEPYMSIQPAEDPDDY
DDGFSVKHTAAARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMVHQRKLE
AELLQIEDRHQDKKRRFLETTDSFNTELKRLCSQKVEVDMEKLAAEMAAAEEAARRRAEE
REREAAEQAEKAAQQAQQQQQQQQQQQQQQEAAGNKAAEQSSPNANAKSTATPTSGTKEE
DTPTPMETDKASPAEPSSDPPPAPPPPSDPPSSASDKATPPPEPPRESSTPSSSTPSDDN
SNSSNNSNSNSMPPPPSDGAPGGAAATPDPPAAPEANSTAANPNVSAAAPPPPPASEEPA
PPPPPPLLPSSQNSQQYDM
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggccatcctacgcccctccccctcccccggccccaacaacccaaatgcct
tccacccctgggtttgtgggctacaacccttacagccatctggcctacaacaacctccga
ctgggagggagctccggaggctccagcaggaacgccaccggcatcaccgtccctaagcct
cccaagcctccagacaagccactgatgccttacatgcggtacagccggaaggtatgggac
caagtgaaggcgtccaacccggacctgaagctgtgggagatcgggaagatcatcggaggg
atgtggagggacctgacagacgaagagaaacaggactacctgaacgagtacgaagccgag
aagattgagtataatgactctctgaaggcctaccacaactccccagcctacctggcctat
gtcaacgccaagaatcgggcggaggccgcgatggaggaagagagccggcagaggcagagt
cgtatggacaaaggcgagccatacatgagcattcagcccgctgaagaccccgatgactat
gacgacggattttcggtgaagcacacagcagccgctcgcttccagaggaaccaccggctc
atcagcgacatcctcagcgagatcgtggtgcccgacgtccgctcggtggtcaccacagcc
cgcatgcaggtgctcaagaggcaggtccagtctctgatggtgcaccagaggaagctggag
gctgaacttctgcagatcgaggatcgccaccaagacaagaaaagacgtttcctggagacc
actgactcattcaacactgagctcaagcggctatgcagtcagaaggttgaggtggacatg
gagaagcttgcggcagagatggccgctgctgaagaggcggcccgtcggcgtgcagaggag
agggagcgcgaggcggccgagcaggcagagaaagccgctcagcaggcgcaacagcagcag
caacagcaacagcagcagcagcaacagcaggaggcggctggcaacaaagctgcggagcag
agtagtcctaatgctaatgctaaaagcacagcaacccccacttcagggaccaaggaggag
gacacgcccacaccaatggaaacagataaagcgtcgcctgccgagccatcctcggacccc
cctcctgccccaccccctccgtctgatcctccctcttctgcttctgataaagcgactcct
ccccccgagccccccagggagagcagcactcccagcagcagcacccccagtgacgacaac
agcaacagcagcaacaacagcaacagcaacagcatgccccctcccccctcagacggcgca
cccggaggagcagcagcaaccccagaccccccggcggccccggaagccaactccaccgca
gctaaccctaacgtgtccgcggcggcgcctccgcctccgcctgcctcagaagagccggcc
cctcctccgccgccgcctctactgccctcgagccaaaacagccaacagtatgatatgtaa
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