Scophthalmus maximus (turbot): 118288850
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Entry
118288850 CDS
T09850
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X2
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118288850 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118288850 (srebf1)
04131 Membrane trafficking [BR:
smau04131
]
118288850 (srebf1)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
118288850 (srebf1)
Membrane trafficking [BR:
smau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118288850 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
118288850 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
118288850
NCBI-ProteinID:
XP_035471290
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All DBs
Position
17:complement(10562986..10578183)
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AA seq
1171 aa
AA seq
DB search
MNTLSFDDPSLDNLDPTLSLNDPSDIDTALLSDIDDMLQFINNQEMEFVGLFDNPPYTAP
PAMQELPGLTQSITPAAPPTATATPPSSSSILSSSPHLDALLGPPITRSSSTPDKAFQPP
TFQQSPLAQVPNSTPRQQPASPQQAQTLRQPQVSQPQPILSPSAPAQAASPHGSPGTSPV
FSSTPQALFTSPAPQTPLQPQPQTQHQAQAQSQQARTNYSSQSSFTAGSPNSQPATILSS
SPPSVQPVAIQTQLQGLTTTTSLLATTASQPVQTIAPHIQQVPVLLQPQFIKAESLLLTT
MASTTSLATTTPVQSTSLQAFMGGGTILTTVPVMVDTEKLPINRIAISGKPVGQPHKGEK
RTAHNAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLRKAIDYIRYIQQTNQKLKQEN
MALKMAAQKNKSLKDLVAMEVDGQADVKNELPTPPASDVGSPTSFSHCSSDSEPDSPMGE
DAKPNVGVLDTSAAGSSAGGMLDRSRMALCAFTFLFLSLNPLAALLCSSGSSSAGSAVAS
SAHHAGRSVLGVDIAADSWGWMDWMLPTILVWLLNGILVSGVLIRLLVYGEPITRPHSGS
SVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLACAALWSLLRFCLQR
LWVGRWLAARAGGLRSDRPLQEDACKSSRDAALVYHRLHQLHMTGKLNGSHLSAVHMALS
AVNLAECSGSCLPVATLAEVYVSAALRVKASLPRILHFTSRAFLSSARQACLSSSGSVPP
AMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREHLLEKALYCVA
QPHGEKRPSQGEGEYADALEYLQLLISASDAAGATSQSFAIGSNMATVTGCDPHSKWWSS
VAVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACLNTFRAVRALLSKPENCQL
SLSYSDKASALLRDSLNLGPHCHSSGLDKVIQLLLCDLLLVMRTNAWRLQQQGASPAGSG
PVGTSGPAGVQQASPPELQGFQQDLSSLRKLAHSFRPAMRRLFLHEATARLMAGASPTRT
HQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLAEAA
RTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgtcgtttgacgacccctcgttggataacctggacccaacgctgtcgttg
aatgaccccagcgatattgatacggccctcttaagcgacatcgatgatatgctacagttc
atcaacaaccaggaaatggagtttgtgggactctttgataaccctccatacacagccccc
ccagccatgcaagagcttcctggtttgacccagtccatcaccccagctgcccctccaacc
gccactgccacacccccatcttcctcttccatcctaagcagtagtccccacctggatgca
ctcctgggccctcccattacccgtagctcctctaccccagacaaggccttccagcccccc
actttccagcagtcccccctggcccaggtgcccaactccacccctcggcagcagccagcc
tccccgcagcaggctcagactctcagacagccccaggtgtcacagccccagcccattctc
agcccgtctgccccggcccaggctgcttcacctcatggctcacctggaacgagcccagtt
ttcagctccacgccccaggctctcttcacctcacctgcaccccagactccacttcagccc
cagccacagacacaacatcaggcccaggctcagtcccaacaagcccgcactaactatagc
agccagagcagcttcacagccggcagccccaacagccaacctgctaccattttgtcatcc
tcacctccaagtgttcagccagtggccatccagactcagctccaggggctgaccaccacc
acctccctactggccacgacagcgagccaacccgtgcaaaccatcgcaccccatatacag
caagttcctgtgttgctgcagccccagttcatcaaagctgagtctctgctgctgaccacc
atggcctctaccacatccctggccaccaccaccccagtacagagcacttcgctgcaggct
tttatgggcggcggcacaatcctgaccacggtgcccgtcatggtggacacagagaagctt
ccaatcaaccgcatcgccatcagcggaaagcccgtcggccaaccccacaaaggagaaaag
cgcactgcccacaacgccatcgaaaagcgctatcgctcctccatcaatgacaagatcatt
gagctcaaagatctggtggctggtactgaggccaagctcaacaagtctgcagtgctgaga
aaagccattgactacatccgttacatacagcagactaaccagaaactcaaacaggagaac
atggccctgaaaatggccgcccagaaaaacaagtctctcaaagacctggtagccatggaa
gtagatggacaggctgatgtcaagaacgagctgccaacccccccggcttctgatgtgggc
tctccgacgtctttctcgcactgtagcagtgactctgagcctgacagtccgatgggggaa
gacgccaagccaaatgtgggcgtgttggacacttcggcagcaggcagcagtgccggcggc
atgttggaccggtcccgcatggcgctgtgtgccttcaccttccttttcctgtctctcaac
cctctggctgctttgctgtgttcgtctggcagcagctcagctggaagcgctgtagcctcc
agcgcccatcatgcaggcaggagcgttctgggtgtggatattgcagcggattcgtggggc
tggatggactggatgcttccaaccatacttgtgtggctcttgaatggtattctggtgtcg
ggtgtcctgatccgtctgttggtgtatggagaacctataaccagaccacactctggatcc
tctgttttgttctggaggcaccgcaagcaggctgacctggacctagctagaggtgatttt
gcccaggccagtcagaacctgtggacctgtctaaaggccctcggtcgccccttacccacc
tcccagttggacctggcttgcgccgcgttgtggtctctgctaaggttctgccttcagcgg
ctctgggtgggccgctggctggctgccagagctggaggtctgcgatctgaccgccccctg
caggaggatgcctgcaagagcagccgtgacgccgccctggtttaccaccgcctgcaccag
cttcatatgacaggtaaattgaatgggagtcacctgtcggcagtgcacatggctttgagt
gcagtgaatctggcagagtgttctggttcctgtctccctgtagccactctggctgaggtc
tacgtctccgcagctctacgggtcaaagccagtctgccgaggatcctgcatttcacctct
cgtgcgttcctgagcagtgcccgtcaggcgtgcctgtcgtccagtggcagcgtgcctcca
gccatgcagtggctctgtcacccactgggtcaccgcttctttgtggatggggattgggct
attcgcagcactcccaaagaaagcatctatagccaggctggcaatacagtcgatcctctg
gcccaggtgactcaggccttcagagagcacctcttggagaaggctctgtactgtgtggcc
cagcctcatggggagaaaagacccagccagggcgagggggagtatgccgatgccctggag
tacctccagctgttgatcagcgcgtcagatgcagctggtgccacgtcccagtcctttgcg
atcggctccaacatggccaccgtgactggctgcgatccgcactccaagtggtggtcctcg
gttgccgtggttatcatcaactggctccaaggagatgacgctgcagcggagaggctgtat
ccgactgtcgagcacctgcctcgcagtctgcagaacgcagagagtcttctgcccaaggct
tgtctgaacacattcagggcagtgcgggctctgctgtccaagccagaaaactgccagctg
agtctgagctacagtgacaaggccagtgccctgctccgagacagcctcaacctaggacca
cactgccacagctccggtttagacaaggtcatccagttgcttttgtgtgatctactgttg
gtgatgaggaccaacgcgtggcgtctgcagcaacaaggggccagtcccgcgggatcaggc
ccggtgggtaccagcggccccgctggggtccagcaggcctccccgccggagctccaagga
ttccagcaggatctcagctccctacgcaagctggcacacagcttcagaccagcaatgcga
agattgtttctccacgaagctacagcccggctgatggcgggggccagtcccacccgcaca
caccagctcctggatcgctcgctgcgacgcagagcaacgcccggagccaagacagaggag
tgcgagacgcgacctggccagcgggaacaggcggaggccgtgatgctagcttgccgctac
ctccctccctccttcctgtcggctcctggccaaagggtcgggatgctggcggaagcagcc
cgcaccctggagaagctgggagacaagaggaccctccacgactgccagcagatgatcatc
aagctcggcagtggcaccacagtcaccaacagctag
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