Scophthalmus maximus (turbot): 118289158
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Entry
118289158 CDS
T09850
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118289158 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
118289158 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118289158 (thoc6)
03041 Spliceosome [BR:
smau03041
]
118289158 (thoc6)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118289158 (thoc6)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118289158 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
ANAPC4_WD40
WD40_Gbeta
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR41
WDR54
Beta-prop_WDR75_1st
WD40_like
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
118289158
NCBI-ProteinID:
XP_035471816
UniProt:
A0A6A4SDB4
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All DBs
Position
17:20497706..20501315
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AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGQIALFSLSAALSPDATTRSQKPVLTFTAHD
GPVFSLVSADGRLLSAGNGEVSAWSWSDLIKKNVRALWTRRPKYKSSLEIPEINSMVLQP
RDNSLVIGGGDNNVHILDLEHGVFKSVLQGHSDYVHCVSVRDRESEILSGGEDGAVRMWD
SRTGQSVHCVEVYKYESCARPQYGKWISCLTTDSDWMLCGGGPSLSLWHLRSLSPTSTFP
LTGCQRQAAFHQDMILAVGDGASVSHCLLAGEVKAQIPCSPQSLNTLQLNTNSSEHQVLT
VGGSSSHIDVFTNLSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccgtcgagctcctccacatgtccgtcttctctcagagcttctctccctgtggt
cgcttcctggcggccgggaacaactacggacagatcgccctcttcagcctgtcagcagcc
ctgagtccagacgccaccacgcggagtcagaaacctgtcctgaccttcaccgctcacgac
ggccctgtcttctctctggtgtcggcagacggtcgcctgctgagcgcaggaaacggcgag
gtcagcgcctggagctggagcgacctcatcaagaagaacgtcagagctctgtggacaaga
cgaccaaagtacaagtccagtctggagatccccgagatcaactccatggtcctccagccc
agagacaacagtctggtgatcgggggaggagacaacaacgtccacatcctggacctggaa
cacggagttttcaagtccgtcctgcagggtcactctgactacgtccactgtgtgagcgtg
agggaccgggagtctgagatcctgtccgggggggaggacggggccgtgaggatgtgggac
agcaggacgggtcagagcgtccactgcgttgaggtgtacaagtacgagagctgcgcccgg
cctcagtacgggaagtggatcagctgtttgaccaccgactccgactggatgctctgtggc
ggaggtccgtctctgtcgctgtggcatctccgctcgctgtcgccgacctctaccttcccg
ctgacgggctgccagcgacaggccgccttccaccaggacatgatcctggcggtgggcgac
ggagcgtcagtgtctcactgtctgctggctggagaggtgaaggctcagatcccctgttct
cctcagagcctcaacactctgcagctcaacaccaacagctccgagcaccaggttctgacg
gtcggaggcagcagcagccacatcgacgtcttcaccaacctgtcgtacagagcgttttca
ctcagcttctaa
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integrated database retrieval system
