Scophthalmus maximus (turbot): 118289239
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Entry
118289239 CDS
T09850
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118289239 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118289239 (rangap1a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118289239 (rangap1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_NLRC4
LRR_CARMIL
LRR_4
SDA1_dom
LRR_SKP2
Nop14
BUD22
Motif
Other DBs
NCBI-GeneID:
118289239
NCBI-ProteinID:
XP_035471954
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All DBs
Position
17:6584770..6593278
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AA seq
576 aa
AA seq
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MATDIVAQLADSLAKTGVEDGELSYKGQGRKLDDAQSVEEIVKEIQDFEGLQALRLEGNT
VGVEAAKAIAKALETKSEFKRCYWSDMFTGRLRSEIPPSLNSLGDALMLAGARLTVLDLS
DNAFGPDGVKGIENLLKSTACYTLQELRLNNCGMGIGGGKILAASLIQCHKKSSADGAPL
SLKVFVAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINHPGVTALATAVQHNPQLRI
LNLNDNTFTERGAIAMAQGLKHLRSIQVINFGDCLVRPEGAIAIAESVSEGIPILKELNL
SFCEITEEAALAVAHAVKDKVQLEKLDLNGNCLGNDGCKALKDAMEEMNMVELLGSLSDD
DGDLDDDDDDEDEDEDEERDDDDEEVNEEEVEEEEEEEEEEESLGNNLSTPVSAPRPPDV
SSFLSFPSPDKLLKLGARRALLIEQQVDVTDAAKTAEAFLKIASVYKDENNDVKDAVLDS
IDALLKKAFSTPSFQGYSFVSSLLVLLGLLKSEDKVKPVLVVPGHLHTLEHVVRQDYFPK
ENVAVLEAFLSRNNKTLESCGNARNGLQSTLQRVRF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgacattgttgcccagttggccgactctctggccaagaccggcgtggaggac
ggagagctgagctacaaaggccaggggagaaagctggatgatgcccagtctgtggaggag
atcgtgaaggagatccaggactttgagggtttacaggccctgaggctggagggaaacaca
gtaggagtggaggcagcaaaggccatcgccaaggccctcgagacgaagagcgagttcaag
cgctgttattggagtgacatgttcacaggtcgtctgcgctctgagatcccaccttccctg
aattcccttggtgacgctctgatgctggcaggtgccaggctgacggttttagatctcagt
gacaacgcctttgggccggatggggtgaagggcatcgaaaatttgctcaaaagcacagcc
tgctacacactgcaggagctacggctaaataactgtggcatgggcatcggaggggggaag
atcttggctgcttcattgatccagtgtcataaaaagtccagtgcagatggagccccactg
agcctgaaggtgtttgttgccgggaggaaccggctagagaacgatggagctactgccctt
gctcaagctttccagttgatgggcagcctggaggaggttcacatgccccagaatggcatc
aatcaccctggcgtgacagccctggccacagccgtgcagcacaacccacaactccgcatc
ctcaacctcaacgacaacacctttactgagaggggggctatcgccatggctcagggccta
aaacacctacgcagcatccaggtgataaactttggggactgcttggtgcggccagaggga
gccatagctattgcagaatctgtatcggagggaatccccatcctcaaggaactcaatctg
tcattttgcgagatcacagaggaagctgctctggctgtggcacatgcagtaaaggacaag
gtccagctggaaaaactggacctgaacggtaactgtctcggaaatgacggctgcaaagct
ctgaaagacgccatggaagaaatgaacatggttgagctcttgggatccctcagtgacgac
gatggcgacctagacgacgacgatgacgacgaggatgaagatgaagacgaggagagggat
gacgatgacgaggaagtgaatgaggaggaagtggaggaagaggaggaggaggaggaagaa
gaggaaagccttggcaacaatttgtccacccctgtgtcggcgccccggcctccagacgtt
tcttccttcctcagctttccgtcccccgacaaactgctcaaactgggggccaggagagcg
ttgctgatcgagcagcaggtggatgtaacagatgctgcaaaaacggctgaagccttcctc
aagattgcttctgtgtacaaggatgagaataacgacgtcaaggatgcagtgttggacagt
attgatgccctactgaagaaagccttctccactccttccttccaaggctacagctttgtg
tcatctttgttggtgctgctcggacttctcaagagtgaggacaaagtgaagccggtgctc
gtggttcccggtcacctccacaccttggagcacgtcgtcagacaggactacttccccaaa
gagaacgtggctgtgctcgaagccttcctgtcccgaaacaacaagacccttgagtcatgt
ggcaatgcaagaaacggcctccaatcaacactgcagagagtccgattttag
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