Scophthalmus maximus (turbot): 118289368
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Entry
118289368 CDS
T09850
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118289368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118289368
Transporters [BR:
smau02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118289368
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118289368
NCBI-ProteinID:
XP_035472219
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Position
17:822224..850143
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AA seq
582 aa
AA seq
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MDTKVEKREHWGKKREYILAVAGNVVGLGNVWRFPYLCYKNGGGVFLLPYLFFALLCGVP
LFLLETVIGQYTQEGAITCWTKICPLSIGAGYSIIVIQLYATIYIMILAWSLLYLIYCFR
GTLPWATCNNPWNTDRCVDHTSENWTAIHSGNQTVNWTSGNFTKSSVSEFWERGVLSMSG
GIDEVGTVKWELLLCLLACWVACYFCIWKGVRSTGKVVYVTALFPYVMLAILLVRGLTLP
GAWHGVVYYLYPEPSRLADIQIWMEACGQVFFSYGVSAGTLITLSSYNKFKNNCYRDSLL
LCVLNNGTSFIAGFAVFSVLGFMAHSQGIPIDIVVHSGPGLAFIAFPQAVAMMPLPQLWA
VCFFIMLIMLGLDTTFTGLEAITSSVIDIFPGTMGKPWRREIFLLLFCSVCFIIQILLTT
KGGIYLFQLVDYYGANGACLLFVALVQCVAVGWSFGAERLCDAVEDMTGQRPGIFFKLCW
RYFTPLICMVCFIGLFVDYKPLTSGDYVYPDWAYYLGWAMALSSIVLTPLWAIGKICLTK
GSLRQRLLVLWHPFSDPVGPKTNKESLLNDTEMKPMSVPLMS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaagtggaaaagagggaacactgggggaagaaaagggaatatattctggca
gtagcaggcaatgtggtgggcctgggcaatgtgtggagattcccctacctgtgctacaag
aatggaggaggtgtcttcctgttgccttacctcttctttgctttgctgtgtggtgtacca
ctgttcctgctggagactgtgattggtcagtacacacaggaaggcgccatcacctgttgg
accaagatctgcccactatcaataggagctggctattctatcattgtgatccagctgtat
gccaccatctacatcatgatcctggcctggtccctcctctacctcatctactgtttcaga
ggcactctaccctgggctacctgcaacaatccttggaacacagacagatgtgtggaccat
acctctgaaaactggactgctatacacagtggcaaccagacagtaaactggacatccgga
aatttcaccaagtcttcagtctctgagttctgggagaggggagtgttgtccatgtctggg
gggatagatgaggttggcacagtaaagtgggagctgctgctttgcctcctggcctgttgg
gtggcctgctacttctgcatctggaaaggtgtccgctccacaggaaaggtggtgtatgtc
acagcattgttcccctatgttatgctggccatcctgctggtgagggggttaactctgcca
ggagcctggcacggtgtggtctactacctgtatccagaaccttctcgtctggcagacatt
cagatatggatggaagcctgtggtcaggtcttcttctcctatggagtatcagcagggacc
ttaatcactctgagcagctataacaaattcaagaacaactgttacagggacagtctattg
ttgtgtgtactcaacaacggtaccagcttcattgccggctttgcagttttctcagttctg
ggcttcatggcccattcccaaggaattcccatcgacatagttgtccattcaggacctggg
ctggcgttcatagcatttcctcaggctgtcgccatgatgcctctgcctcagttgtgggct
gtctgcttcttcatcatgctcattatgttggggctggacacaacgtttacaggactggaa
gctatcacatcatcagtgattgacatcttcccaggaacgatgggcaaaccctggcgtaga
gaaatcttccttctcctcttctgctctgtctgcttcatcatacagatcctcctcaccact
aagggaggaatctatctgttccagctggttgattactatggtgctaatggagcatgttta
ttatttgtggctctggtccagtgtgtcgcagttgggtggtcctttggggctgaacggtta
tgtgatgcagttgaagatatgacaggacagaggccagggatttttttcaaactgtgctgg
cgttatttcacccctctgatctgcatggtttgcttcataggcttatttgtggactacaag
cccctgacatctggggactatgtgtacccagactgggcctactatctgggctgggccatg
gccctatcctctatagttctgacacccctctgggctattggcaagatctgcctcaccaag
ggctccctcagacagcgtcttttggtcctttggcatccttttagtgaccccgttggtccc
aagacaaacaaagaaagtctcctgaatgacacagagatgaaaccaatgtcagtccctctc
atgtcatga
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