Scophthalmus maximus (turbot): 118289426
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Entry
118289426 CDS
T09850
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04120
Ubiquitin mediated proteolysis
smau04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118289426 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118289426 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118289426 (mgrn1b)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118289426 (mgrn1b)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118289426 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118289426
NCBI-ProteinID:
XP_035472326
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All DBs
Position
17:complement(14474613..14482032)
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AA seq
549 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDAPVEEGEKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPSMVSETVHYKRGVSQQFSMPSFKIDF
SDWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSGTDSVPP
GFEPISLLEALNGLRSVSPAIPTAPLYDDINFSGGLGGESRQLSSPEHLSDGSLQKSKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTMLSSNPAPTDATATEDVAESLSPDDEDR
MHAGGDILQDCSSEHRCLTKTESDPAGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLDP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgtgctgagtcgcagaatcgctggtgtcgaggacatcgatatccaggccaac
tcggcctatcgattcccacccaaatctgggaattattttgcgagtcacttcttcatggga
ggagagaaattcgacacaccacatccagagggatacctctttggagaaaacatggacctg
aattttcttggaaataggccagtgcagtttccatatgtgacgcctgcaccccacgagcct
gtgaaaaccctgaggagtctggtcaacatcagaaaggactctctgcgtttggtcaggtat
aaagatgactcggacgcaccagtggaggagggtgaaaaacccaaggttcagtacggtgtg
gagttcaccttcgatgctgatgctcgagtggccatcaccctctactgccaggcatttgag
gagttctccaatgggatggcagtgtacagcccaaaggatccatcaatggtctctgaaact
gtacattacaagcgaggggtgagccaacagttctccatgccgtctttcaaaatcgatttc
agcgactggaaagaggaagatctgaactttgacctcgaccgaggagtgtttcccatggtt
atccaggctgtagttgatgaaggagacgattgccttggacatgctcacgtacttttggca
gcctttgaaagacacgttgatggcagtttctccgtcaagcctctgaagcagaaacaaatt
gtggaccgcgtgagctacctcttacaggagatttatgggattgagaacaaaaacaaccaa
gaaaccaagccatccgacgatgagaacagcgataacagcaacgagtgtgtcgtctgtctg
tccgacctgcgggacacgctcatcctgccctgcagacatctgtgtctctgcaactcctgc
gcagacaccctgcgttaccaggccaacaactgtcccatctgcagactgccgtttagagcc
ctcctgcagatcagagctgtgaggaaaaagcctggagctctttctcctgtgtctttcagc
cctgttctggctcagactatggaccacgacgagcactcgggcacagactcggtgcctccc
ggctttgagcccatctcactgctggaagctctgaacggtctgcggtcggtatctcctgcc
atcccgactgcaccgctgtacgatgacatcaacttctccgggggtttgggtggtgaaagc
cgacagctgagctccccagagcatctaagtgatgggagtctgcagaaaagcaaagtcagc
aagtcacctgacagcacccttaggtctccgtcttctcccatccaggaggaggatgaggag
aagctgtctgagatgtctgacgctcagccacacacgatgctgtccagcaaccccgccccc
acagacgccacagcaaccgaggacgtcgcagagtccctgtctccagacgacgaggacagg
atgcatgcgggtggagacatcctgcaggactgcagcagcgagcacagatgcttgaccaaa
acagagagcgacccagcaggagacctgtctctgccagggtcgtccgagtcaacggaaagc
ctgaaaagtcagagcacaaactgctccagccagcccctcctgtgtcccacgagcagcctt
cacatggaggatgagcatctcgacccgtga
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