Scophthalmus maximus (turbot): 118289464
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Entry
118289464 CDS
T09850
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118289464 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118289464 (lrrc4ba)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
NGL family
118289464 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Ig_6
Motif
Other DBs
NCBI-GeneID:
118289464
NCBI-ProteinID:
XP_035472410
LinkDB
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Position
17:complement(16614101..16641784)
Genome browser
AA seq
735 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRFLLPGPELVGAASSSCPSLCTCSNQASRVICTRQN
LEEVPESISINTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNL
NTLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLD
FISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLR
KLWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCN
CDVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVT
EGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYKVRISVLHDGTLNFTNVTLRDTGQYTC
MVTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEESALVAINETFIRVHPG
PTPSGHLWPEGVSTTASSLSAGWSSTSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGC
FVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTV
TQSGSSGIGGGQSLRLHHPEMVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGPGVGLN
NNNNPSPCSQSQNLSCSQVPTSTGGGTLTGGTLPSPVPLPPLGLHSSLKGLMGKGQNEPL
LFKSGSKENVQETQI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgttgacctgccttcccggcccctcccccttcctctttttactggcc
cagctgctgctgcggttcctcctccctgggccggagttggtgggagccgcctcctcctcc
tgcccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaac
ctggaggaggtgcccgagagcatatcaatcaacacgcgatacctcaacctgcaggagaac
tccatacaggttatcaagtccgacactttcaagcacttgaggcacctcgagatcctccaa
ctctccaagaatcagatccgtcagatcgaagtcggagcttttaatggcctccccaacctc
aacacactggagctcttcgacaaccgcctcacactggtgccatcacatgctttcgagtac
ctcagcaagctgcgggagctgtggctgcgcaacaaccccattgagactctgcccggctat
gccttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggat
ttcatctccgacgcggccttcgtgggcctcatcaatcttcggtacctgaacctgggcatg
tgtggactgaaggacattcccaaactgacagcccttgtgcgtttggaggagctggagctg
tctggaaaccgtctggagattattcgacccggctcctttcagggcttagtgtctctccgc
aagctgtggctcatgcactcacaggtgtctgtcattgagcgcaatgccttcgatgacctg
aaaagcctggaggagctcaacctgtcccataactctctgcactccttgccccatgacctc
tttacgccccttcaccagctggagagggtacaccttaaccacaacccctgggtctgcaac
tgtgatgtgctttggcttagctggtggttgaaagagacggtgcccagcaacaccacctgc
tgtgctcgctgccatgctcccccattcttaaagggcaagtacattggagagcttgaccag
agccacttcacctgctatgcgcctgtcattgtggagccacctacggacctcaatgtcact
gaaggaatggctgctgagctgaagtgtcgcacgagcacgtccacgacatctgttaactgg
atcacccctaatggcactctaatgacccacggctcttacaaggtgcggatatcagtcctg
catgatggcacactcaacttcacaaatgtcaccctgcgagacacaggccaatacacctgc
atggtcaccaatgctgctggcaacaccacggcaactgctgtccttaatgtcacagctgct
gacgccagtgtcaactacacctacttcacgacggtcaccgtggagacagtggagactcca
ggagatgaggaatctgcactggttgccatcaatgagacattcatccgtgttcaccctggc
cccactccttcgggccacttgtggccagaaggtgtttctaccacagcctcttctctgtca
gccggctggtcctccacctctcctcgggccacgcggcccaccttcactgtgcccatcacg
gagccgggcttctcaggcctagatgatgtgatgaagaccaccaagatcatcattggctgc
ttcgtagccattaccttcatggcagcggtgatgttggtggtgttctacaagctgaggaag
cagcaccagctgcataaacaccacggcccggctcgtgccatcgagatcatcaatgtggag
gacgagctgggggctggggccagtggtcgaggcagcggcatctcaggaggctccaccgtg
acacagagcggaagcagtggaataggagggggccagagcctcaggctgcaccacccagag
atggtcaaccttccgaacctcgcccgatcagagcacctcaaccactactacaaaacccat
cacttcaacaacaacatgatgggcctgggcatgggcacaggtcctggtgtgggtctcaac
aacaacaacaacccctcgccttgctctcagtctcagaacttatcctgttcccaggttcca
acctccaccggcgggggtacgctcacaggtggcaccctcccctcccctgtgcccctgccc
ccgttgggtctccacagttccctgaaaggcctcatggggaaaggccagaacgagccactg
ctctttaagagcggctccaaagaaaatgtgcaagaaactcaaatctga
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