Scophthalmus maximus (turbot): 118289779
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Entry
118289779 CDS
T09850
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118289779 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118289779 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118289779 (srsf5b)
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
SR proteins
118289779 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
118289779
NCBI-ProteinID:
XP_035472677
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All DBs
Position
18:15212874..15218601
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AA seq
328 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGAAGGAGGGGGGGGGGGGGGGGGGGGRFSADRYGRGSQ
NSRSRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASY
SDLKNALEKLSGKEINGRKIKLIEAAKKRSRSRSRSDSSSRSRSRSRGRSPSRSPRRSRT
PTKAHNRSRSRSRSRSRSRSHSRSRSRSVSPAGSPSSPKTKDPAKRSKISKSATPPPLPP
AQRVSISRSRSRSRSRSRSRSRSTDSQR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgtatcttcatcggccgactcagtccctcggcccgggagaaggacgtg
gagaggttcttcaaaggatacggccgcatccgagacatcgacctcaagagaggcttcggg
tttgtggagttcgatgaccccagagatgctgaagatgcagtgtatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccattgagcacgctcgtgtccgtctgcgcggcggccgt
ggcaggggtgctgccggcggcgctggaggtggtggtggtggaggaggtggtggtggtggt
ggtggtggtggtggtggtggtggacggttctctgctgaccgctatggccgaggctcccag
aacagtcggagccgaaaccctcctccgatgcgcacggagaaccgtctgattgtggagaat
ttgtcctctcgcgtgagctggcaggacctgaaagatttcatgagacaagctggagaggtg
acattcgcagacgcacaccggcccaagctcaacgaaggggttgttgagtttgcctcttac
agtgacctgaaaaatgcccttgagaaactgtctggaaaggaaatcaatggcaggaaaatt
aagctcatagaagcagcaaagaagaggtccagaagtcgttcccggtctgacagctcctcg
cgctctcggtctcgttcccgcggtcgctctccatcacgctcgcccagacgctcacgcacc
cccacgaaggcccacaaccgctcccgctcccgctcccgctctcgctctcgctcccgctcc
cactcccgctcccgctctcgcagcgtctctcccgccggcagcccctcgtcccccaaaaca
aaggatcccgccaagcgctccaagataagcaagtccgccaccccgccccccctgccgccc
gcccagagggtctccatctcccgttcccgctctcgttctcgttctcggtctcgctctcgc
tctcgctcgactgacagccagcgctaa
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