Scophthalmus maximus (turbot): 118290255
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Entry
118290255 CDS
T09850
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118290255 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118290255 (capn3b)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
118290255 (capn3b)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C2: calpain family
118290255 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Integrase_DNA
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
118290255
NCBI-ProteinID:
XP_035473691
EnsemblRapid:
ENSSMAG00025009542
LinkDB
All DBs
Position
18:complement(14255254..14266845)
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AA seq
772 aa
AA seq
DB search
MGDKTREGKGPIVEDTKVKVLHDTEASLGPDDKADYPAAGANSIYSAILSRNEAVKDAKR
LKTFLELRDKYVKKKVVFEDPLFPADDSSLFYSHKPSMKIEWKRPSEICENPEFIVDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTRDYAGIFHFQFWRYGEWIDVV
VDDRVPTCRNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
FFELSEAPKELYSIMKKALARGSLMGCSIDVVSASEVETRTEQGLVKGHAYSIIGLEECD
VVAKNTKIRLIRLRNPWGLVLWKGPWSANSKEWPSISIADKENLRKQTVEASEFWMSFDE
FKRNFTKLEMCNLTPDALQGEERHSWTVSINEGRWVRGSSAGGCRNFPDTFWTNPQYRLQ
LNEEDDDPEDGQVACTVVVALMQKGRRMQRHQGARFLTIGFSIYEVPKEMCGQNQHLQKD
FFLYTASRAKCKMYINLREVTERFRLPPGEYVVIPTTFEAHREGEFILRVFSEKQSTSEE
AENTIEPGQIQQDKKKKEKPIVFVSDRARANKEIEHDGIQGEKRKKPKRKLLEPEEETEE
EKQFRAIYQQISGEDMQICANELKTIMRNVLAKHSEIKTTDGFSLETCRSMIALMDTDGT
GKLNLQEFKHLWKKIKEWQLIFKRFDQDKSGSISSFEMRNAVNGAGFHLNKQLYDIIAMR
YADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagacgcgagaagggaaagggcccattgtggaagacacaaaggtgaaagtg
cttcacgacactgaagcgtcactcgggcccgatgacaaagctgactaccctgctgccggt
gcgaactcgatctactctgccatcctgagcagaaacgaggccgtcaaggatgccaagcgc
ctcaagacatttctggagctgcgggacaaatacgtgaagaagaaggtggtgttcgaggac
cccctgttccctgcggacgactcctcgctcttctacagtcacaagccttccatgaagatt
gagtggaaacgcccctcggaaatctgtgaaaaccctgagttcatcgtggatggagccaac
aggacagacatctgccagggagaattgggtgactgctggctgctcgccgccatcgcctgc
ctgacgctgaacgagaagctgctgtacagagtgatccccccggatcagagcttcacccgg
gactacgccggcatcttccacttccagttctggcgttatggcgaatggatcgacgtggtc
gtggacgaccgcgttcccacctgcaggaaccagctggtgttcaccaaatccttcaggaag
aacgagttctggagcgctcttttggaaaaggcttacgcaaagctgcacggctcttacgag
gcactgaaaggggggaacacgctggaggcgatggaggatttcacaggtggagtcaccgag
ttcttcgagttgtccgaggcgcccaaagagctctacagcatcatgaagaaggcgctggcg
agaggctcgctgatgggctgctccatcgatgtcgtttcagccagtgaagtggagactcgg
accgaacaggggctggtcaaaggccatgcctactccatcataggcctggaggagtgtgac
gtggtcgcaaaaaacaccaaaattcgcctgattcgtctgcgcaacccctggggcctggtg
ctgtggaagggaccgtggagtgcaaattcaaaggagtggccgagcatttccattgcagac
aaggagaacctaagaaaacagaccgtggaggcgagtgagttctggatgtctttcgatgaa
ttcaagaggaacttcaccaagctggagatgtgtaacctgacccccgatgccctgcagggt
gaggagagacacagctggacggtgtccatcaacgagggccggtgggtgagaggcagctct
gctggcggctgcaggaacttcccggacacgttttggacaaacccccagtaccggctgcag
ctcaatgaggaggatgacgacccagaggacggacaggtcgcctgcacggttgtcgtggct
ctgatgcagaaaggtcgacggatgcagcgccaccaaggggccagattcctcaccatcggc
ttttctatctacgaggtgccgaaggagatgtgcggacagaatcaacatctgcagaaggac
ttcttcctgtacacggcctcgagggccaaatgcaagatgtacattaatctgcgagaggtg
acggagcgttttcgcctgcccccgggggagtacgtcgtcatccccacgacctttgaggcc
caccgagagggcgagttcatcctcagggtcttctccgagaagcagagcacgtccgaggag
gcggagaacacaatcgagccgggacaaattcagcaagacaagaaaaagaaagaaaagcca
attgtgtttgtgtcagacagagcacgtgccaacaaagagattgagcatgacggcattcag
ggggaaaagaggaagaaaccgaagcgaaagctgttagaacccgaggaagagactgaagag
gaaaaacagttcagggccatttaccaacagatatccggcgaggacatgcagatctgtgcc
aacgaactcaagacgatcatgaggaacgtcctcgccaaacacagtgaaataaagacgaca
gacggtttcagcctcgagacatgtcggagtatgatcgccctgatggataccgacgggaca
ggaaagctgaacctgcaggagttcaagcacttgtggaaaaagatcaaggagtggcagctg
atcttcaagcgcttcgatcaagacaaatccggttccatcagtagttttgagatgaggaac
gctgttaatggtgcagggtttcacctcaacaagcagctgtatgacatcatagcaatgcgc
tacgcggacgaacacctcaacatcgactttgacagctacatctgctgttttgtgaggctg
gagggcatgttcagggctttcaacgccttcgacaaagacggagatgggataatcaaactc
aacgtcctggagtggcttcagctgaccatgtactcttaa
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integrated database retrieval system
