Scophthalmus maximus (turbot): 118290272
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Entry
118290272 CDS
T09850
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
118290272 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118290272 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smau03310
]
118290272 (esr1)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
118290272 (esr1)
Nuclear receptors [BR:
smau03310
]
3. Estrogen like
3A. Estrogen receptor
118290272 (esr1)
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GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
118290272
NCBI-ProteinID:
XP_035473716
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Position
18:12841962..12854081
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AA seq
636 aa
AA seq
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MCKRQSPAQIRQRCGPALRPRISPALSELETVTPPRLPPAPRASLGDMYPEESRGSEGVA
TVDFLEGTYDYATPAQTPLYSHATTGYYSAPLDAHGPPSDGSRLSLGSGPTSPHVYVPSS
PRLSPFMHPPSHHYLETTSTPVFRSSQQPVAREDHCGTSDESYSLGESGAGAGAEGFEMA
KETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQA
CRLRKCYEVGMMKGGMRKDRSRVLRRDKPRTGTSDRDKASKDLEHKTVSLQDARKCLSTG
GRGGGGRKSSITCMPSDQVNGLSSVTVYLLLSQVLLLLQGAEPPILSSRQKLNRPYTEVT
MMTLLTSMADKELVHMIAWAKKLPGFLQLSLHDQVQLLESSWLEVLMIGLIWRSIHCPGK
LIFAQDLILDRNEGNCVEGMAEIFDMLLAAASRFRMLKLKSEEFVCLKAIILLNSGSFSF
CTGTMEPLHNIAAVQDMLDTITDALIHHISQSGCSVQQQWRRQAQLLLLLSHIRHMSNKG
MEHLYSMKCKNKVPLYDLLLEMLDAHCVHRPARPVQSWFQVDGEPENNNSSGGGSGSPSA
GSSSGPRGGLESPSRATTCPGVLQFRGSRPDCTHIL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagaggcagagcccggctcagatcaggcagcgttgtggaccagcactcagaccc
aggatcagcccagccctctcagagctggaaacagtcaccccaccacgtctcccgcctgca
ccgcgtgcctccctcggtgacatgtaccccgaggagagccgggggtctgaaggggtagcc
actgtggactttttggaagggacgtacgactatgcaacccctgcccagactcctctctac
agccacgccaccactggctactactctgcgcctctggatgcccacggtccaccctccgat
ggcagtcgtctgtccctcggcagtgggcctaccagtccccacgtgtacgtgccctccagc
ccccgactcagcccctttatgcacccgcccagccaccactatctggaaaccacttcaaca
cccgtattcaggtccagtcagcagccagtagccagagaggaccactgtggcaccagtgac
gagtcatacagtttgggggagtcaggtgctggagccggagccgagggatttgagatggct
aaagagactcgcttctgtgccgtgtgcagtgactatgcctctgggtaccactatggggtg
tggtcctgtgagggctgcaaggccttcttcaagaggagcatccagggtcacaatgactac
atgtgcccggcaaccaaccagtgcactatcgacaggaatcggaggaagagctgccaggct
tgccgactgaggaagtgctacgaagtgggcatgatgaaaggaggcatgcgcaaggatcgc
agccgggttttgcggcgtgacaagccacggactgggactagtgacagagataaggcctct
aaggatctggagcacaaaacagtgtccctccaggatgcaaggaaatgcctcagcactggt
ggaagaggaggaggaggaagaaaatcatccatcacttgcatgccatctgaccaggttaat
ggactgtcaagtgtgactgtgtatctgttgctctcccaggtgctcctcctgctccagggt
gccgaacccccaatactgtcctcccgtcagaagctaaaccgaccctacaccgaggtcacc
atgatgacgctgctcaccagcatggctgacaaggagctcgtccacatgatcgcctgggcc
aagaagcttccaggtttcctgcagctgtcgctgcacgaccaggtgcagctgctggagagc
tcgtggctggaggtgctgatgatcgggctcatctggaggtccatccactgccctggcaaa
ctcatcttcgcgcaggacctcatactggacaggaatgagggcaactgtgtcgagggcatg
gctgagatcttcgacatgctgctggccgccgcgtcccgcttccgcatgctcaaactcaag
tcggaggagtttgtttgcctaaaagctatcatcctgctcaactctggttctttctccttc
tgcaccggcacaatggagccactgcacaacatcgcggcggtacaggacatgctggacacc
atcacggacgctctcatacatcacatcagccaatcgggatgctcagttcagcagcagtgg
agacggcaggcccagctgctcctcctgctctcccacatcaggcacatgagcaacaaaggc
atggagcacctctacagcatgaagtgcaagaacaaagtgcctctgtacgacctgctgctg
gagatgctggacgctcactgcgtccaccgccccgcgagacccgttcagtcctggttccag
gttgacggagagccagagaacaacaacagcagcggcggtggcagcggctcaccttcagcc
ggctccagctcaggaccccggggcggcctcgagagcccgagcagagccacgacatgtccg
ggtgtcctgcagttcagagggtcccgccccgactgcacccacatcctatga
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