Scophthalmus maximus (turbot): 118290295
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Entry
118290295 CDS
T09850
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04217
Necroptosis
smau04622
RIG-I-like receptor signaling pathway
smau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118290295 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118290295 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
118290295 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118290295 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118290295 (si:cabz01101003.1)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118290295 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C67
118290295 (si:cabz01101003.1)
Ubiquitin system [BR:
smau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118290295 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118290295
NCBI-ProteinID:
XP_035473766
LinkDB
All DBs
Position
12:10314737..10330497
Genome browser
AA seq
982 aa
AA seq
DB search
MSGAHEQGRRRRPPRTFVISTHLRVQDRLDGTIRLRRGFMCQEPAEGRSRGGDWLWVKVL
DSGLVVKVERRFLLDVPSEFSGLLEPVSDPDARLKLLNNPIILQQLVALQADAPLWVQRG
QQDELLEAELKYVGPLTRGSSSVFFGVQLKGSAAGKGVSNGSFRGQRLFTCPDACALFLP
ASDIRLRHWTSRNGSVAQERGRERDHRHPSNGHQSNDSRPSHHHLQQQSRHISFHQPPPS
GAPQPLAPVFLPQTAESAPIAAQVQTQVRRSASAPLLHVGQRVCFPLEDTLYGGEVLYYG
EVRFCGVLPSRSSSGTYVGVLLDAPVGNWDGLHQGEKLCHIPSVLYGLLLPINSVSSVSP
ETTSQRHTPPQQRPKPILKPAPFPDTKPAATSPPAFAPKLAIMPPSKPAPKPPPLPPPKP
ALKPLSPLKPLPPPLPLPKLRSPTSPTVTEQLQHTNGVHGPASPLPYPDPPDAVGEDGEA
LEVGSMVEVNDPPIFGVICWIGRISGIHEPVAGIELDQELSAGTDGSYLGERHFRCPANK
GLFVKLRNCRRDSRFPAPETPINQVERCNSIAFAEWGSERVEEDTPPVDGDEARERYQGW
KRGIQGHLNSCYLDATLFSLFSVCSSADWILFWPCDIDPTSCQAQDLLRCEVVNPLRRFG
YVCASKTMALRRLLEAADRNTGFTSQEKDPEEFLNRLFQLLRVEPLLKIRSMTQQPQECH
LYQLFPPAIPPSPPSPHSPGDSPPPLSLPSSSRMRVAGVQTLLESSFLNAGLKFVEAPSC
LLLLMPRFGKDFKMFDAIFPTLSLDITDLLDDTLRQCSICQAVAQWECLQCYTDVDITPG
RLKQFCPTCNTQVHSHRKRTSHSPVKVGVPAGPWPSSLHCARQTMSLFAVTSIETSHYVS
FIRHGPLPTDWMFFDSMADREGGENGFNVPRVMACPEVGRYLGLSEEELSRVDPASLREP
ARRLLCDSYMCLYHSPELSLYK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggctcacgagcagggcaggaggcgccgcccccccagaaccttcgtgatctcg
acccacctgcgggtccaggaccgactggacggaaccatccgcctgcggcgggggttcatg
tgccaggagccggcggaaggcaggagccgagggggcgactggctctgggtcaaggtgctg
gacagcggcctggtggtgaaggtcgagcgcaggttcctgctcgacgtcccgtccgagttc
agcggtctgttggagccagtgtctgatccggacgctcgtctgaagcttctaaacaacccg
ataatcctgcagcagctggtggcgctgcaggctgacgcccccctgtgggtccagaggggc
caacaggacgagctgctggaggcggagctcaagtacgtgggacctctgacccgtggcagc
agctctgtgttctttggggttcaactgaagggttcagcggcaggtaaaggagtgagcaac
ggttccttcagaggccagcggctcttcacctgccccgacgcctgcgccctgttcctcccg
gccagcgacatccggcttcgccactggacgagcagaaacggttctgttgcacaggagcga
ggccgcgagcgagaccatcgtcaccccagcaacggtcaccagagcaacgacagccgccca
agtcaccatcatcttcagcagcagagtcgtcatatcagtttccaccagcctcctcccagc
ggcgctcctcagccgctcgctcccgtgttcctccctcaaaccgcggagtcagcgcctatc
gccgctcaagtccagacccaggtccgccgctctgcgtcagctccgctgctccacgtgggc
cagcgggtgtgtttccccctggaggacacgctctacggcggggaggtactctactacggg
gaggtgcgcttctgcggcgtcctgcccagccgctcctcgtctgggacgtatgtcggcgtc
ctgctggacgctccggtcgggaactgggacggacttcaccagggagagaagctctgtcac
attccttcagtcctctacggacttttactgccaatcaacagcgtttcctcagtgtctcca
gagacgacgtcccagcgtcacactcctcctcaacaacgaccaaaacccatcctgaagccg
gcgccgttccccgacaccaaaccagctgctacttcaccacccgccttcgctcccaagctc
gccataatgccgccctccaaaccagcgccgaagcctcctccactgccgccgcccaaaccc
gccctgaagcctctttcccccctgaagcctctgcccccccctctgccactgcccaaactc
cgcagtccaacgtcgcccacggttacagagcaactgcaacacaccaacggcgtccacggc
cccgcctccccactgccgtatccagatcccccggacgccgtaggggaggacggagaggcg
ctggaggtgggctccatggtcgaggtcaacgacccccccatcttcggggtcatctgctgg
atcgggaggatcagtgggatccatgagccggtggccggaatcgagctggaccaggagctg
tctgcggggacggacggcagttacctcggtgagcgacacttccgctgtccggccaataag
gggctgttcgtcaagctgcgcaattgtaggagggactccaggttccccgcccccgagaca
cccatcaatcaagtggagcgctgcaactccatagcgtttgccgagtggggcagcgagcgt
gtggaggaggacacgcctcccgtggacggagacgaggccagagaacggtaccagggctgg
aagagagggatccagggtcacttgaactcctgctacctggacgctacgctgttcagtctg
ttctccgtctgtagttctgcagactggattttgttctggccgtgtgacattgacccgacg
tcctgtcaggctcaggacctgctgcgctgtgaggtcgtcaacccccttcgaaggttcggc
tacgtgtgtgcaagcaagaccatggccctgaggcgtctgctggaggcggcggacagaaac
acgggcttcaccagccaggagaaagatcctgaagaattcctcaacaggctcttccagctc
ctccgagttgagccgctcctcaagatcaggtccatgacccagcagcctcaggagtgtcac
ctctaccagctcttcccgcccgccatccccccctcccccccctcaccccattccccgggc
gactcccccccccctctctccctgccctcgtccagtcggatgagagtcgccggcgtccaa
acgctgctcgagtcctccttcctcaacgccggcctcaagtttgttgaggctccttcctgt
ctcctgctgctcatgccccggtttgggaaggacttcaaaatgtttgacgccatctttccg
actctcagcctggacatcaccgacctgctggacgacactctgaggcagtgcagcatctgt
caggctgtggcccagtgggagtgtctgcagtgttacactgacgtggacatcacgccgggt
cggctcaaacagttctgccccacctgcaacacacaggtccacagtcacaggaagaggacg
tcccacagcccggtgaaggtcggcgttcctgcgggaccgtggcccagctctctgcactgc
gcccgccagacgatgtctctcttcgccgtgacgagcatcgagacgagtcactacgtgagc
tttatcagacacggaccgctccccaccgactggatgttctttgacagtatggccgacaga
gaaggtggcgagaatggcttcaacgtcccccgggtgatggcgtgtcccgaggtgggtcgt
tacctcggcctatcagaggaggagctgagccgagtggaccctgcctcactacgggagccg
gcgcgccgcctgctgtgtgactcctacatgtgtctgtaccacagtcctgagctcagcctg
tacaagtga
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