Scophthalmus maximus (turbot): 118290306
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Entry
118290306 CDS
T09850
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118290306 (taf1a)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
118290306 (taf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
118290306
NCBI-ProteinID:
XP_035473780
LinkDB
All DBs
Position
18:complement(14702572..14709215)
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AA seq
430 aa
AA seq
DB search
MMDDTGRELRPLEDPEDDCYSSSSDDTSVEVGEKPKTPRVDAMCVETPRENGFHQSTRIC
LEYIREAMLHHRWQEAAEYMACYPQMLEDTSFGYTERCKELVWRLSTEILHHHPNSNMDD
YNSIYERMKHSGFKHYLKISLEHSFHLLLHGHIVDAKRQLLTTASWRYGKEQAVQHQKAK
LIHAYRSLLDYILWCDKKVSNSDPDYQESCDIQEKNNNFRQASVNLKEIVRNPGVWDPFI
LSYVEMLEFYKDHKEALSVLNDYAYDNNFPPNPNAHVYLYQYLKRHDAPEKKLLKVLKIL
HVSVPSHELMLEYSSLLLQSEKESDIQKAFRIIVEMLDFACWRSNLDVWNRLKAIIQKLK
SQKDWRKVVHAEMAGRKDWWPVLHFTSFHASKDSDENPDLMEVKASLINVLCPDTKLKYG
ARGVNSGERT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacacaggcagagagctgaggccacttgaagacccagaggatgattgctac
tcttcctcttcagacgacacctccgtggaagtaggggaaaaacccaagaccccccgggtt
gatgccatgtgtgtagagacaccaagggaaaatgggtttcaccagtctaccaggatctgt
ctggagtacatcagagaggccatgctgcatcacagatggcaagaggctgcagaatatatg
gcatgttacccccaaatgttggaagacacatctttcggctatacggagcggtgtaaagag
ctcgtttggagactcagcactgagatccttcaccatcaccccaactcaaatatggacgac
tacaacagcatctatgaacgaatgaaacattcaggattcaagcattacctgaagatcagt
ctggaacattccttccacctgctgctccacggtcacattgtagatgcgaagcgtcaattg
ttgaccactgcgagttggaggtatgggaaggagcaggcagttcagcatcagaaggctaaa
ttgatccacgcctacaggagcctgctggattatatcctctggtgtgacaagaaggtctca
aactccgaccctgactatcaggaatcttgtgacatccaagagaagaataacaacttcaga
caggcctctgtgaatcttaaggagattgtgagaaatcctggtgtctgggatcccttcata
ctgagttacgttgagatgctggagttctataaggatcacaaggaagctttgagtgtcctg
aatgactacgcctatgacaacaattttcctcccaatcccaatgcgcacgtctatctgtac
cagtacttaaagcggcacgatgccccggagaagaaactgttgaaagtgttgaagatcctc
catgtgtcagtcccaagccacgagctgatgttggagtacagctctctcctgcttcagtca
gagaaagaaagtgatatccaaaaagcttttcgaatcattgtggaaatgctggacttcgca
tgctggaggagcaacctggatgtgtggaaccgcttaaaggccattattcagaaattaaaa
tcccaaaaagactggaggaaggtggtccacgcagaaatggctggaagaaaagactggtgg
cccgtgctgcacttcacgagcttccacgccagtaaagactctgatgagaacccagatctg
atggaggtgaaggcatcactgataaatgtcctctgcccagatacgaagctgaagtacggc
gccagaggggtaaacagtggagagcgaacgtga
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