Scophthalmus maximus (turbot): 118290383
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Entry
118290383 CDS
T09850
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118290383 (lama4)
04518 Integrin signaling
118290383 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118290383 (lama4)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
DUF7630
Zw10_N
MHC_I_C
Motif
Other DBs
NCBI-GeneID:
118290383
NCBI-ProteinID:
XP_035473897
LinkDB
All DBs
Position
18:1146357..1176149
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AA seq
1877 aa
AA seq
DB search
MAAKSLSCLCLLCILIVTAYPTSAARLGEQQQSVLTVCAKGFFLSEQNICLPCNCKGHAD
SCEDITGVCINCREHSTGDFCEMCEDGYMLAPSMDRRHTCRPCACPLSVPSNNFAERCDK
GGAILRCKCQEGYAGHLCERCAPGYYGNPMAIGNSCKRCDCNGNSDPNLIFNECHNVTGD
CQHCWGNTAGANCERCAPGFYGDAISAKNCRECVCNKCGTSSCDDRTGVCHCKPGVTGRL
CDRCEEGYSGFSSCQGCRRCECGPASIRSTCHPLTLSCPCRPGAGGRYCERCLPGYWDYS
LSGCQKCDCESGHCDMHTGECLSEAATVNLCNISCDECIWHLIGDLRLSNKTLDQLKVGV
LNISTGAAANDRLKYYNYTAHRLQTQFQGWRNKSSAMKAQTGELEEATESVVLDIKQLGE
SESVVMTLGNRLDNATLETLTLAEQLSTNLTDLNIRIEEMIHDWELYSVQQDVDPEVVRR
NTEVAQGMVTWMKELNLSPREPVATDESTEAHDLLRQIRQLEKKLMITEGRLLPVREVLS
RFSSKLSDAQGFLQKAAGTVQEDMNRANVLKFHRNEAKQQMLTEDHTAVNDTLEESRGLI
SDTERTVAEVDAMVQNVTEYHAAIDGASQKLTEKTERLSLANRDLVQRADEHAEELEKQA
NELEEDLRASDANGFVQRAISAVNVYNNIVKYIEDANITSLTTLNLSQRAEDAIIGINTQ
LGNLVTQSDNVFKESVSLHSEQFEVETEVVDKLKYIEETKETMDKNTKKLAEIVQDISGI
QTDRTPQRLEFTLKVAEGTLNRSAEVLQTVMPISSKVEEWANNMKNNEYSTAAYEEVVSS
AGEAVENLNMLVPELLDKLKVVEEKKPVNNVTTNIMRIRELIAQARSVAKKVQVSMKFNG
QSSVEVHPHSNLEELKTVTSISLFMRVDPDKDPIEDRFIFYLGDRNGRKDYMGLAIKNDN
LVYVYNLGGEDVEIPLGSKPVSQWPAVFNYIKVERLGRHGKVFLTIPSQSSTDEQKFIQK
GEAPGTDSIFDIDPKDIVFFVGGVPPDVRLPPPLSLAPFVGCIELGSLNNDVISLYNFKE
THKVDVVTSSPCSRYKLAFSQSRIASYLFDGTGYALINNIERRGKFGVVTRFDIAVRTVA
NNGVIFLMVNAEKFFLLEFKNGFLRLVYDFGFTDGPKRLENLTKLQINDARYHEVSVIYH
QSKKVILLVDKSHVKSVENPKTTLPFSDIYIGGAPSSILKSRPELSAVVGLKGCVKGFQF
QKKDFNLLEEPGTIGISSGCPEESFMSHKAYFTGESYLGSTAKISPFDSFEGGLNFRTVL
PSGLLFYHSEGSDEFSISLENGAVVLNTRGTRVKSHKKQYGDGRTHFLVASVNNQKYSLL
VDDKDKQEKKRPSSATRSSTGSAIKTFYYGGSPSSSFKNFTGCISYAYVNRQDRDIEPED
FQKYTEKVKTSLQDCPVHRPPAALLSRHRNNTSRAKHGELQKVTRDKSNLPLGLMELTSD
SQEPPELNTEPCYLSSSPRASQQAFHYGGIANSRQHYIDLPDSLSERSHFSLSLKTYSSF
GLIFYVSDVQEDNFMALFLAHGKLVYTFNVAEQRVKIKSDDKYNDGAWHNVIFIRDGSVG
RLIIDGLTVLEDSAQGSDVSWHISSPLYVGGVPPERAQKNIQRNSAYSFTGCLKNLQLDG
RLLSSVTDTFGVTPCFDGLSEAGTFFSEEGGYIVLDESFNLGLKFELVMEVRPRVASGVL
MHVRTAEGYVTMYTHQGAVVVLVNDGTNEFFTEVPPRQGLCAGNWHRITVIRDANVVQLD
VDSEVNHVVGALNANSTDERKPVFIGGAPDLFLPESLPTRKAYVGCMRNLTINNSPVSFS
KAVLVSGAVSVGTCPAA
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaatctctgtcctgcctttgccttctctgcatcctcatagtgacggcctat
ccaacttctgccgccaggcttggggaacagcaacagtcggtgttgacagtgtgtgcgaag
ggatttttcctcagtgagcaaaacatatgcttaccatgtaactgtaaaggccacgctgac
tcatgtgaagacatcaccggcgtttgtataaattgcagggagcacagtacaggtgatttc
tgtgaaatgtgtgaagatggttacatgctggctcccagcatggaccgacgccacacctgc
agaccttgcgcctgccccctctcagtcccctccaacaactttgcagagcgctgtgacaaa
ggaggtgccattctgaggtgcaagtgccaagaaggctatgctggacatctttgtgagagg
tgtgccccgggttactatggcaaccccatggcgatcggtaattcttgtaagaggtgcgac
tgcaatggcaactccgaccccaacctgatcttcaatgagtgccacaacgtgacgggtgac
tgccagcactgctggggaaacaccgccggtgccaactgtgagaggtgcgccccaggtttc
tatggcgacgccatcagtgccaagaactgcagagagtgcgtgtgcaataaatgtggcacc
tcttcatgtgacgacaggacaggagtgtgtcactgcaaaccaggtgtcactggacgactc
tgcgaccggtgtgaggagggctactctggtttctccagctgtcagggttgtcggaggtgt
gaatgcgggccagcttccattcgctccacctgccatcctctcaccctcagctgcccgtgc
cgcccgggcgccggtgggcgttactgtgagcgctgcctcccaggttactgggactacagc
ctgtccggctgccagaagtgcgactgtgagagcggccactgtgatatgcatacaggagag
tgcctgtcagaagctgcaacagtcaacctgtgcaacatcagttgtgatgagtgcatttgg
catctgattggggacttgcgtctgtccaataaaacacttgaccagctgaaagttggagtg
ttgaatatctccactggagctgctgctaacgacaggctcaaatactacaactacacagca
catcgactgcagactcagtttcaaggctggaggaacaagtcatctgcaatgaaggcgcag
actggggagctggaggaggccacagagtctgtggttttagacatcaaacagctgggagaa
tcggagagcgtggtgatgactttggggaacaggctggataacgccactctagagacctta
accctggctgagcagctcagcacaaacctcactgatctcaacattcgcatcgaagagatg
atccatgattgggagctgtacagtgttcagcaggatgtggacccagaggtggtcagacgc
aacacagaggtggcccagggaatggtgacctggatgaaggaactgaacctgtctccacga
gagcccgtcgccactgacgagtccactgaggcccatgacttgctaaggcaaatccgtcag
ttggagaaaaagctgatgatcacagaaggtcgactcctacctgtcagggaggttctgtcc
cgtttttcctccaagctgtcagacgctcagggctttctccagaaagcagccggcactgtg
caggaggacatgaacagagcaaacgtcctcaaattccataggaatgaggcaaagcagcag
atgctgacagaggaccacactgccgtcaatgacacactggaagagtccagaggcttaatc
tctgacacagagaggactgtggctgaggtggacgctatggtgcagaatgtgaccgagtac
catgcagcgatcgatggcgccagccagaagctgacagagaagacggagcgtctgtcgctg
gctaacagagatttggtccagagggccgacgagcatgccgaggagctggagaaacaggcc
aatgaactggaggaggatctgagagccagcgatgccaacggctttgtgcagagagccata
agtgctgtcaacgtctacaacaacatagtgaaatacattgaagatgcaaatatcacctcg
ctcaccaccctcaacttatcccaaagagctgaagatgctatcattgggatcaacacacag
cttggaaacctggtaacgcagagtgacaatgttttcaaggaatctgtttcattacactca
gaacaatttgaggttgaaactgaggtggtagacaaactaaaatacatcgaggagaccaaa
gagaccatggataaaaacaccaaaaaacttgcagaaattgtgcaggatataagtggaatt
caaacagacaggacaccacagcgtctggagttcaccctgaaggtggcagaagggactctc
aaccgctcagcagaggtccttcaaactgttatgcccataagcagcaaagttgaggaatgg
gccaacaacatgaaaaacaacgaatactccacagctgcctatgaagaggtcgtttcctcc
gccggagaagccgtggagaacttgaatatgctcgttcctgagctgctggacaagctgaag
gtggttgaggagaagaagcctgtcaacaacgtaaccaccaacatcatgaggatcagagag
ctcatagctcaggcaaggagcgtggccaagaaagtccaagtgtccatgaagttcaacggc
cagtcttcggtggaggtgcaccctcacagtaacctggaagaactgaagacagtgacatcc
attagcttgttcatgagagtggaccctgacaaggatcccattgaggaccgtttcatcttt
tacctgggagacagaaatggtaggaaagactacatgggtctggctatcaagaacgacaac
ctggtgtacgtgtacaacctcgggggcgaagatgttgagatcccgctgggttcaaagcct
gtcagccagtggcctgccgtcttcaactacatcaaagtagagagactcggcagacatgga
aaagtcttcctgacaatccccagtcagagctccacagacgagcagaagttcatccagaag
ggcgaggctccaggcactgactccatatttgacattgaccccaaggatatagtgttcttt
gtcggtggagtcccaccagatgttaggcttccaccccctctgagtcttgctccttttgtg
ggctgcatagagttgggctcgctcaacaatgacgtgatcagtctgtacaatttcaaggag
actcacaaagtggatgtggttacatcatcaccgtgctccaggtacaagttggcattctcg
cagagtcgcatcgccagctacctgtttgatggaacaggttacgctctcatcaataatatt
gagaggaggggcaaattcggcgttgtcacaagatttgatattgcagttcgaacagttgca
aataatggagtcatttttcttatggtcaatgcagagaaattcttccttttggaatttaag
aatggcttcctgcggctagtgtatgactttggcttcaccgatgggccaaaacgtttggaa
aacttaacaaagctgcaaataaatgacgctcgataccatgaggtgtcggtcatctaccac
cagtcaaagaaggtaatcttgctagtggacaaaagccatgttaaatctgtggagaatccg
aaaaccactcttcccttctcagacatctacatcggtggggctccgtcaagcattctaaaa
tccaggccagagctgtctgccgtggtcggcctgaaaggctgtgtgaaaggtttccagttc
cagaaaaaagacttcaacctgctggaggagcctggcaccattggcatcagcagcggctgc
cctgaggagtcctttatgtcccacaaggcctatttcactggagagagctaccttggatcc
acagcaaagatttcacccttcgacagctttgagggaggactcaactttagaacagtcctg
cccagtggacttctgttctaccacagtgaagggtctgatgagttcagcatctccctggag
aacggagcagtggtgctgaacaccagaggcacaagagtcaaatcacacaagaaacaatac
ggtgatggaaggacgcacttcttagtggcctcagtcaacaatcagaagtattctctgttg
gtggatgacaaagacaagcaggagaagaaacgtccatcatcagccacaaggtcctcaaca
ggctctgctataaagaccttctactacggagggtctccgagcagcagcttcaagaacttc
acaggctgcatcagctatgcctacgtcaacagacaagatcgtgacattgagcctgaggac
tttcagaagtacacagagaaggtgaagacctccctgcaggactgtccagtccatcgcccc
cctgccgctctgctgtcaaggcacaggaataacacctccagagccaaacatggcgagtta
cagaaggttaccagggataagtctaacctccctcttggcctgatggaactgacaagtgat
agccaggagccaccagagctgaacactgagccctgctacctctcctcaagtcccagagca
tcccaacaagccttccactatggtggcatcgccaacagcagacagcactacatagatctc
ccagactccctttcagagaggtcccacttctccttgtccctgaagacctactcatccttt
ggtctcatcttttatgtatctgatgtccaagaggacaatttcatggctctcttcctggcc
catgggaagctggtatacaccttcaacgtagcagagcagagagtcaaaatcaagagtgat
gacaaatacaatgatggtgcatggcacaatgttatttttatccgtgatgggagtgtgggt
cgattaataattgatgggctcacagtgctggaggacagcgctcagggaagcgacgtctcc
tggcatatcagcagtcccctctatgttggaggagttcctcctgagagagcccagaagaat
attcagagaaactctgcatacagctttaccggctgtttaaagaaccttcagctcgatgga
aggttgttgtcctctgtgacagacacgtttggggtcactccttgctttgacggactctct
gaggcgggaacattcttctcagaggaaggaggatacatcgtgctggatgaatcttttaac
ctggggctgaagtttgagctggtgatggaggtgcgcccccgtgtggcatctggggtgcta
atgcatgtgcgcacagcagagggatatgtaaccatgtacactcaccaaggagcagtcgtg
gttcttgtaaacgatggaaccaatgagttcttcaccgaagtgcctccaagacagggtctg
tgtgctggcaactggcacagaattactgtgatccgagatgccaacgtcgtccagctggat
gtggactctgaggtcaaccacgtggtgggagctctgaatgccaactccacagatgagaga
aagccggtgttcattggtggagccccagatcttttcctcccagagagccttcccaccaga
aaggcctatgttggctgtatgaggaacctgaccatcaataacagcccagtgagcttcagc
aaagctgtcttggtcagtggagctgtcagtgtcggaacctgcccagcagcataa
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integrated database retrieval system
