Scophthalmus maximus (turbot): 118290437
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Entry
118290437 CDS
T09850
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118290437 (stxbp5a)
Membrane trafficking [BR:
smau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118290437 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
118290437 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_VPS8
Synaptobrevin
CFAP43_N
VPS8_N
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
118290437
NCBI-ProteinID:
XP_035474011
LinkDB
All DBs
Position
18:complement(12352582..12429522)
Genome browser
AA seq
1143 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSSAPSVQVGPQENHLIQESIQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFSKERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLVIGFESGIVVMWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTDMSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDIESPDGGGGGGDTTPAIPTPGASPQTSGPPSHPSTGSNNSDGGNMPCLKVR
STPLKQSPGYQVDLVVQLVWVSGEPPQQITSMVLNSSYGLVVFGNSNGLAVVDYIQKTVV
LNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLTSNSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
EAREAISSFHFCETFARKGDSTLTHCLHVGTTLGTVLALSLTLPPAGEQRQLQPVIISPT
GMLVRLKGSISRMAVLDSTGSLLPPAYEPWYEPNITTDGEEREKVRKRRPVSVSPSTSQD
LNENQYAVVCSEKQAKVIALPSQTCIYKHSITETSFILRADVVQMSQGLCMACFCANGHI
MTLSLPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQDTCENLQE
MLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGELSSGKASRSLAQHIPGPGGLE
GMKGAASGVVGDLARARIALDERGQKLGELEDRTAGMMASADSFSKHAHEMMLKCKDKKW
YQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggcttgaaagaggcgtcctcctccgcg
ccgtcggtccaagtggggccgcaggagaaccatctgatccaggagagcatccagtccgag
cacttccagctctgcaagactgtccgccatggtttcccctatcagccgtcgtccatggct
tttgaccccgtgcagaagatactggccatcggcacccagagcggggctctccggctgttt
ggtcgtccaggtgtggagtgttactgtcagcacgagagcggcgctgccgtcatccagctg
cagtttctcatcaatgagggagcgctggtgagcgctctggcggatgacagtgtccacctg
tggaacctgaggcagaagagaccagccatccttcactccctcaagttcagcaaagagaga
atcacttactgccacctgcccttccagagtaagtggctgtacatcggcacagaacgaggg
aacatccacatcgtcaacgtggagtcctttacgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcaccctggaccagttgtccatattagcgacaac
ccaatggacgagggaaagcttgtaattggattcgagtccggcatcgtggtcatgtgggat
ctgaagtcaaagaaggccgactatcgctacacttacgatgaggcgatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagacggaactctgaccatatgg
aacatcagaggccagggcaagcccatacagacaatcaccccacatggaaaacagcccaag
gacgggaagaagccagagccttgtaaacccattctcaaagtggagtacaaaaccacgaga
aatggcgagcccttcatgatcctgtccggtggtctgtcctatgacacggtgggccgacgg
ccttgtctgacggtaatgcatggaaagagtacggccgtgctggagatggactatcccata
gtagatttcctcacactctgtgagacaccataccccaatgattttcaggaaccttacgct
gtggtggtccttctggaaaaggatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgaaaacccctatcctctgactatccacgagtcgcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcacggcagaaa
cgacagggctacagcaaaaaggaatggcctattagtggtggaaactggggtcagggcaca
cagagctacccagagatcatcatcactgggcatgctgatggaactgtgaagttctgggat
gcctccgcaataatgctccaggtgctctataagcttaaaacagccaaggtgtttgacaga
aaccggtccaaggaagacaagggcagcacggacatgtcagacgaagacccctttgccatc
cagatcatggcctggtgccccgagagccggatgctgtgtgtggccggagtgtcagccaac
gttatcatctaccgcttcagcaagctggaagtaaccacggaggtggtgcagctactagag
gtgcgaatgcagtacgagctgaacgacatagagtcgccagacggcgggggcggagggggg
gatacgacaccggcgattccaacacccggtgcctcccctcagacgagcggcccaccttcg
catccctccaccggcagcaacaactctgatgggggcaacatgccctgcctcaaagtgcgc
agtactcctctgaagcagtctccaggttaccaggtagatttggtggtccagctagtgtgg
gtcagtggagagcctcctcagcagatcacaagtatggtgctcaattcctcctacggccta
gtggtgtttggcaacagcaacggtctggcagttgtggactacatccagaagaccgtagtg
ctcaacttggggacggtggagctttacggctccaatgacccctaccagagacagccccgg
tcgccaagaaagacgagacagccttctggaggtctctgcgacatcaacgagggctccgcc
acatcagaggaccgctgcaagtcccctacttcagtgttgacgtcaaacagcaatctacag
caattctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaacccatta
gaccaccgggacaattccttcagccgctctcgctcctccagtgtcaccagcatcgacaag
gaagcccgagaggccatcagctccttccacttctgcgagacttttgcccggaagggggac
agcactttgacacactgcctgcacgtgggcacgaccctgggaacggtgctggctctatct
ctcacgttgccacccgccggggagcaacggcaactgcagccggttatcatttcccccacg
ggcatgttggtgcgactgaagggcagcatctcgcggatggctgtcctggactccacaggg
tccctgctgccccctgcgtatgagccttggtacgaacctaatatcacaactgatggtgaa
gaaagggagaaggtccgtaagcggcggcccgtctccgtgtccccctccacctctcaggac
ctcaacgagaaccagtacgccgtggtgtgttctgagaaacaggccaaagtcatagccctc
ccctcgcagacctgcatctacaaacacagcatcactgagacctccttcatcttacgggca
gacgtggtgcagatgagccaaggcttgtgcatggcttgtttctgtgccaacggccacatc
atgaccctcagtttgccgggattgagaccgctcatggatgtaaactacctgcctctgaca
gacatgcggatagccaggacgttttgtttcaccaacctgggtcaggccatgtacctctgc
tcccccactgagatccagaggatcacctacagccaggacacctgtgaaaacctacaagag
atgctgggtgaactttttactccagtagagacaccagaggcacccaacagaggcttcttc
aaaggtctctttgggggaggagcacagtcactggacagagaagagctatttggtgagcta
tcgtccggaaaggcatctcgaagcctggcccagcacatcccaggcccgggcggcctcgag
ggcatgaagggagcagcctccggtgtggttggagatctggcacgtgcccgaatagcgctg
gatgaaagaggccagaaactgggcgagctggaggacaggacagcgggcatgatggccagt
gcagattccttctccaaacacgcccacgagatgatgctgaagtgcaaagacaaaaagtgg
taccagttctga
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integrated database retrieval system
