Scophthalmus maximus (turbot): 118290875
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Entry
118290875 CDS
T09850
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118290875 (trpc1)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118290875 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Topo_VI_alpha
TALPID3
Motif
Other DBs
NCBI-GeneID:
118290875
NCBI-ProteinID:
XP_035474500
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Position
21:complement(1296458..1310812)
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AA seq
796 aa
AA seq
DB search
MRISVWPYSLSVAMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRRGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDQVDKRGLME
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGTKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVANSKFKN
VEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKATRVDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWRNLKQKHDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPGS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcagtgtttggccgtactcgctctccgtcgcaatggcagctctgtaccagggc
accgacgcctcctccccggataaattcctggccttgaaagacgtgcgggaggtgaaggag
gaaacgacgctggacgagaagctgttcttgctggcgtgcgagaaaggtgactactacatg
gtgaagaaactcctcgaggagaaccgacgcggcgagctcaacatcaactgcgtcgacgtg
ctgggccgagacgccgtgaccatcaccatcgagaatgagaatctggacatcctgcagctt
cttctggagcacggctgtcaggcgacagatgccttattggtggccatagactcagaggtg
gtgggagctgtggacatcctcctcaaccacaggcccaggcggtcatccaaaccctccatc
gctaaactgatgcagcggattcagaacccagagtattccaccaccatggacgtggctccg
gtcatcctggcggcccacaggaacaactacgagatcctgaccatgctgctgaaacaagac
atctcgctgccccgaccccatgctgtgggctgcgagtgcacgctctgcaatgctaaaaac
aagaaggacagtttacgacactccaggttccgcctggacatctacaggtgcctggccagc
ccctcgctgatcatgttgaccgaagaagatcctatactcagggcctttgagctgagtgca
gacctcaaggagctcagtctggttgaggtggaattcagaaatgattatgaggagctggcg
aagcagtgtaagatgtttgccaaggacctgctggctcaggctcgaaactctcgagagctg
gaagtgattcttaatcacacgtccagcgaagatcaggtcgacaagagaggcttaatggag
gagcgcatgaacctcagccgacttaaacttgccataaagtacaaccaaaaagagtttgtg
gctcagtccaactgccaacagttcctcaacaccgtctggttcggagagacggccagctac
cggcgcaaacacacctgtctaaagatggccacggtgctgagcgtggcgatgctttggccg
ctgctctctgtctgctaccttctggtgccgcgctcgcgcgtgggccagatcatccacacg
ccctttgtgaagttcatcatacacagcgcctcctacttcacattcctgctgctgctcaac
ctctactctctagtctacaatgaaggcacgaaaaacaccatgggccctgcgctggagatg
atcgattacctgctcatcctttggatcatagggatggtgtggtcggacgtaaagcgcctg
tggtacgaggggctggaagactttctggaggagtcgaggaaccagctgagctttgtgatg
aattccctttacctcgcgacatttgcccttaagattgttgctaacagcaagttcaagaat
gtggaggacaccgagcggaagaactgggatgccttccatcccatcctggtggctgagggc
ctgtttgcctttgccaacgttctcagctacctgcgactcttcttcatgtacaccaccagc
tccatcctggggccgctacagatctccatgggtcagatgctgcaggagtttggaaagttt
ttgggcctcttcctgctggtgctattctccttcaccattggcctcactcagctttatggg
aaggaccagaaagacccagacaaggcgacacgcgtggactgcgagggcattttctgccag
caacagagcaatgacgcattccacacgttcatggggacgtgctatgccctgttctggtac
atcttctccctggcgcacgttgcacttttcgtcacccgcatctcctacactgaggagctg
cgctcttttgtgggtgccatgatcataggcacctacaacattgtggtggttattgtcctg
accaagctactggtggctatgctccataaaagcttcagacaaattgctaatcacgaggat
aaggagtggaagtttgctcgggccaaactgtggcttagctactttgatgacaagtgtacc
atgccaccaccgttcaatatcctcccgtccccaaagactgtgtgctacttggtgaccagc
atgagcaagtggatctgttcacatacatcgaagggcaaggtgaagagacagaacagccta
aaggagtggcggaacctaaagcagaagcacgatgagaactaccagaagatcatgtgttgt
ctggttcaccgctacttgacctccacgcggcaaaagatgcaaagcacagaccaggccacg
gtggaaaatctgaatgacctacgccaagacctctccaagtttcgcaacgagatgagggac
ctgctaggtttccggacgtccaaatatgccatgttctacccagggagttaa
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