Scophthalmus maximus (turbot): 118291034
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Entry
118291034 CDS
T09850
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
smau04054
]
118291034
Pattern recognition receptors [BR:
smau04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
118291034
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_1
DHU1_N
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118291034
NCBI-ProteinID:
XP_035474785
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Position
21:complement(12813786..12820310)
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AA seq
961 aa
AA seq
DB search
MGPGVKDDKTRETGGRNSFPLILFFCLLNISGLLVPVTGFALKTCRVSYNIAKCVKMKLI
AVPRDIPSTVKRFDLSANIISRVQVTDFQNFKILTQLELNCNMISGIDNGAFANLISLKK
LNLNNNKLVGLGEDLFHGLSNLTELRINGNLIQDVASSSFRDMKSLTFLDISHNKLHQIT
KVHSILQHLPHLRDVKIKNNGLTTFCSWELTNSSVELKHLDLSQNPIANFSITADVFPNL
TWFNIGGSPGKQQMIWDVRNKTFFNQVSTLDISGLQMAFDDMKTLLEIVNSSLTSLSMNA
MKCGLTALINISCTIPTMSRLELRQNKLSNVSLDLFKLCFNVTEMDLTRNKIKNIHENAF
RSLQSLRILSLSRNRLSSVPAATRKLPSLTELDLSFNIITELGCDDFANQTELRHLQLDG
NLISALQKCLFKDLIRLQVLKLQNNRISNLNSAFKNYLPNLTKLFLNENELTEIKHEEFS
GLKSLQNLSLVENKIKTLEEGCFIGLRNLMDILLQKNNLKEIEINKGCFNDLINLRRLDL
RENHIKYENSSSLPHAPFSQLSRLETLAIPSQHRRLKSYLPRNFLQGLTNLLFFNSRNIQ
LLALHKDMFNDTPQLQTLDISSNELMDLSPDLFSPIQNLKSLYISRTSLQSLDFLVNANL
TKLKFLQARKNEYSVISEEIIKSVPGLIYADFQGNSFTCDCDNAWFIKWVKNNNETQVFD
AYNFECNYPVNLKGMKLLEINIRSCSVDVEFIFFISSTCSILFFMVVSFTYHFLRWQLTY
AYYLFLALLFDTKHKNKRAPNQYDAFISYNTHDEAWVIRELLPKLEGEQGWRLCLHHRDF
EPGKPIMENITDAIYGSRKCICVITRRYLESEWCSREMQVASFRLFDEHKDVLILVFLEE
IPAFELSPHYRMRKLLRRRTYLSWPRAGEQTELFWEKLRQALQTRDDGAEDCFLLPVEDR
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctggagtgaaagacgacaaaacaagagaaacaggaggaaggaacagttttcca
ctcatcctttttttctgcttgctgaatatcagcggcttgcttgtcccagtcacaggattt
gcgctgaagacttgccgagttagttacaatattgccaaatgtgtcaaaatgaaactcata
gctgttcctcgagatattccctcaacagttaaacgttttgatttgtctgcaaacataatt
tcaagagtacaagtgacagatttccaaaattttaagattttgacgcagttagagctgaat
tgcaatatgatttcaggaatagacaacggtgcatttgccaatctgatttccctcaagaaa
ttaaatttgaataacaacaaacttgttggacttggagaggatctttttcatggtctgagc
aacctcacagagctcagaattaatggtaatctcatccaagatgtggcctcctcctctttt
agggacatgaaaagcttaacatttttggacatttctcacaacaaactgcaccagatcaca
aaagttcattcaatattacagcatctgccacatctgcgtgatgtgaaaattaaaaacaac
ggtttaaccactttttgctcatgggaactgacaaacagctcagtagaactcaaacatctt
gacttgtctcagaatccaatcgcaaattttagtatcactgcagatgtttttccaaacctc
acctggtttaacattggtggctctcctggaaagcaacagatgatatgggatgtgcgtaac
aagactttcttcaatcaagtttctactcttgatattagtgggcttcaaatggcttttgac
gacatgaaaacattacttgagattgtaaactcctcactaacatctctaagtatgaatgct
atgaaatgtggcctcactgcgcttatcaacatttcatgcaccatcccaactatgtccaga
ctggagctccgccagaacaaactcagtaatgtcagtttagatttgtttaagttgtgcttt
aatgtaactgagatggatttaacaaggaataagataaaaaacatccacgagaacgccttc
agatctctccaaagtctaagaatcttgagtctgagtcgcaataggctttcatctgttcca
gctgccacaaggaagctaccaagtcttacagagttggatctgagtttcaatatcattacc
gaacttggatgtgacgattttgccaatcagacagagctgagacatttacagctcgatggg
aatttaatctcagctctacaaaaatgtcttttcaaggatttgataagattgcaagtttta
aaactacaaaacaaccgtatatcaaacttaaatagtgctttcaagaattatttgccaaat
ctgacaaaactgtttttgaatgaaaatgaactcactgaaattaaacatgaggaatttagc
ggcttaaagtccctccaaaacttgtcattagttgaaaataaaataaaaacacttgaagaa
ggatgtttcattgggctgaggaatcttatggatattctgctccagaaaaataatttaaag
gaaattgaaataaacaaaggttgcttcaatgatctgataaatttaagaagattggattta
agggaaaatcatattaaatatgaaaatagttcatctttgcctcatgcaccattctctcag
ctgtcccgtctggagacattggccattccttcacaacaccgcaggctaaagtcttacttg
cctcgtaacttcctgcaaggtttgacaaatctgttgtttttcaattccaggaacatccaa
ctattagccttgcacaaagacatgtttaatgacacacctcagctccaaacacttgacatt
agctcaaatgaacttatggatctctctccagatttgttttccccgattcaaaaccttaaa
agcctttacatttccagaacaagtctccagtctcttgattttcttgtaaatgccaacctc
accaagctgaagttcttgcaagcgagaaagaatgaatactcggtcatcagtgaagaaata
ataaagtccgtaccaggtctcatttatgcagattttcaagggaacagcttcacctgtgac
tgtgataacgcctggttcatcaagtgggtcaaaaacaacaatgaaacgcaggtatttgat
gcctataactttgagtgcaactatcccgtgaaccttaaaggaatgaagctcttggaaatc
aacatccggtcctgctcagtagatgtcgaattcatcttctttatctccagcacatgttca
atcctcttttttatggtggtgtcctttacctaccatttcctgaggtggcagctgacctat
gcctactacctctttttggctttgctctttgacacaaagcataaaaacaagcgagctcct
aatcagtatgatgccttcatctcctacaacactcatgacgaagcctgggtcatcagagag
ctgctgcccaaactggagggagaacagggctggagattgtgtctgcaccacagagacttc
gagccaggtaaacccatcatggaaaacattacagatgctatttatggaagcaggaagtgc
atctgtgtgatcactcgcagataccttgagagcgagtggtgctccagagagatgcaggtg
gccagcttccgtctgttcgacgagcacaaggacgtgctgatcctggtctttctggaggag
atccccgccttcgagctgtcccctcactaccgcatgaggaaactgctgagaaggaggacc
tacctgagctggcctcgagccggtgagcaaaccgagctgttctgggagaaactgcgacag
gctctgcagaccagggacgatggtgcggaggactgcttcctcctccctgtggaggacaga
ccatga
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