Scophthalmus maximus (turbot): 118291035
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Entry
118291035 CDS
T09850
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
smau04054
]
118291035
Pattern recognition receptors [BR:
smau04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
118291035
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_1
TIR_2
LRR_9
LRR_14
LRR_6
LRR_NXF1-5
DHU1_N
LRR_EndoS
DUF4559
Motif
Other DBs
NCBI-GeneID:
118291035
NCBI-ProteinID:
XP_035474786
LinkDB
All DBs
Position
21:complement(12820452..12825284)
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AA seq
962 aa
AA seq
DB search
MGPGVKDDKTRETGGRNSFPLILFFCLLNISGLLVPVTGFALKTCRVSYNIAICVKMKLI
AVPQDIPSTVKGFDLSANIIARVQVTDFQNFKILTQLELNRNRISGIDNGAFANLISLEK
LNLNNNKLVGLGEDLFHGLSNLTELRINGNRIQDVASSSFRDMKSLTFLDISHNKLHQIT
KVHSILQHLPHLRELNIKNNGLTTFCSWELTNSSVELKYLDLAQNPIANFSITADVFPNL
TWFNIGGSPGKQQMIWDVHNKTFFNRVSTLDISGLQMAFDDMKTLLEIVNSSLTSLRMNA
MKRGLTALINISCTIPTMSRLQVRRNKLSYVSSDLFKLCFDVTEMDLAENKIKNIPDNAF
RSLQSLRILSLSRNRLSSVPAATRKLPSLTELDLSFNNITKLGCDDFANQTKLRRLNLYG
NSISALQECLFKDLIQLQVLKLQNNRISNLNSAFQNYLPNLRQLLLNGNELTEIIHGEFS
GLKSLQNLSLLGNKIKTLEEGCFIGLTNLTDILLQNNHITEIEINKSCFNDLINLRRLDL
RENHIKYENSSSLPHAPFSQLSRLESLAIPSQHGKGKSQLPRNFLQGLTNLLFFNSRNIQ
LLALHKDMFNDTPQLQTLDISSNELMDLSPDLFSPIQNLKSLYISRTSLRSLDYLTGSNL
TKLEFLQARKNEYSVISEEIIKSVPGLVYADFQGNSFTCDCDNAWFIKWVKNNNETQVFD
AYNFECNYPVNLKGMKLLELDIRSCSVDVEFIFFISSTCSILFFMVVSFTYHFLRWQLTY
AYYLFLALLFDTKHKNKRAPNQYDAFISYNTHDEAWVIRELLPKLEGEQGWRLCLHHRDF
EPGKPIIENITDAIYGSRKTICVISRRYLESEWCSREMQVASFRLFDEQKDVLILVFLEE
IPTSELFPHYRMRKLLNKRTYLSWPRAGEHTELFWEKLRQALQTRDDRAEDCFLLTVLDG
RQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctggagtgaaagacgacaaaacaagagaaacaggaggaaggaacagttttcca
ctcatcctttttttctgcttgctgaatatcagcggcttgcttgtcccagtcacgggattt
gcgctgaagacttgccgagtcagttacaatattgccatatgtgtcaagatgaaactcata
gctgttcctcaagatattccctcaacagtgaaaggttttgatttgtctgcaaacataatt
gcaagagtacaagtgacagatttccaaaattttaagattttgacgcaattagagctcaat
cgcaataggatttcggggatagacaacggtgcctttgccaatctgatttccctcgagaaa
ttaaatttgaataacaacaaacttgttggacttggagaggatctttttcatggtctgagc
aacctcacagagctcagaattaatggtaatcgcatccaagatgtggcctcctcctctttt
agggacatgaaaagcttaacatttttggacatttctcacaacaaactgcaccagatcaca
aaagttcattcaatattacagcatctgccacatctgcgtgaactgaatattaaaaacaac
ggtttaaccactttttgctcatgggaactgacaaacagctcagtagaacttaaatatctt
gacttggcccagaatccaatcgcaaattttagtatcactgcagatgtttttccaaacctc
acctggtttaacattggtggctctcctggaaagcaacagatgatatgggatgtgcataac
aagactttcttcaatcgagtttctactcttgatattagtgggcttcaaatggcttttgac
gacatgaaaacattacttgagattgtaaactcctcactaacatctctaaggatgaatgct
atgaaacgtggcctcactgcgcttatcaacatttcatgcaccatcccaactatgtccaga
ctgcaggtccgccggaacaaactcagttatgtcagttcagatttgtttaagttgtgcttt
gacgtaactgagatggatttagcagaaaataagataaaaaacatccccgataacgccttc
agatctctccaaagtctaagaatcttgagtctgagtcgcaataggctttcatctgttcca
gctgccacaaggaagctaccaagtcttacagagttggatctgagtttcaataacattacc
aaacttggatgtgacgattttgccaatcagacaaagctgagacgactaaacctttatggg
aattcaatctcagctctacaggaatgtcttttcaaggatttgatacaattgcaagtttta
aagctacaaaacaaccgtatatcaaacttaaatagtgctttccagaattatttgccaaat
ctgagacaactgcttttaaatggaaatgaactcactgaaattatacatggggaatttagc
ggcttaaagtccctccaaaacttgtcattacttggaaataaaataaaaacacttgaagaa
ggatgtttcattgggctgacgaatcttacggatattctgctccagaataatcatattaca
gaaattgaaataaacaaaagttgcttcaatgatctgataaatttaagaagattggattta
agggaaaatcatattaaatatgaaaatagttcatctttgcctcatgcaccattctctcag
ctgtcccgtctggagtcattggccattccttcacaacacggcaaggggaagtcacaattg
cctcgtaacttcctgcaaggtttgacaaatctgttgtttttcaattccaggaacatccaa
ctattagccttgcacaaagacatgtttaatgacacacctcagctccaaacacttgacatt
agctcaaatgaacttatggatctctctccagatttgttttccccgattcaaaaccttaaa
agcctttacatttccagaacaagtcttcggtctctagattatcttacaggttccaacctc
accaagttggagttcttgcaagcgagaaagaatgaatactcagtcatcagtgaagaaata
ataaagtccgtaccaggtcttgtttatgcagattttcaagggaacagcttcacctgtgac
tgtgataacgcctggttcatcaagtgggtcaaaaacaacaatgaaacgcaggtatttgat
gcctataactttgagtgcaactatcccgtgaaccttaaaggaatgaaactcttggaactc
gacatccggtcctgctcagtagatgtcgaattcatcttctttatctccagcacatgttca
atcctcttttttatggtggtgtcctttacctaccatttcctgaggtggcagctgacctat
gcctactacctctttttggctttactctttgacacaaagcataaaaacaagcgagctcct
aatcagtatgatgccttcatctcctacaacactcatgacgaagcctgggtcatcagagag
ctgctgcccaaactggagggagaacagggctggagattgtgtctgcaccacagagacttc
gagccaggtaaacccatcatagaaaacatcacagatgccatttatggaagcaggaagacc
atctgtgtgatcagtcgcagataccttgagagtgagtggtgctccagagagatgcaggtg
gccagcttccgtctgttcgacgagcagaaggacgtgctgatcctggtctttctggaggag
atccccacctccgagctgttccctcactaccgcatgaggaaactgctgaacaagcggacc
tacctgagctggcctcgagccggtgagcacaccgagctgttctgggagaaactgcgacag
gctctgcagaccagggacgatcgtgctgaggactgcttcctcctcactgtgctggacggt
cggcagtaa
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