Scophthalmus maximus (turbot): 118291086
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Entry
118291086 CDS
T09850
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03271
Virion - Rotavirus
smau04145
Phagosome
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04514
Cell adhesion molecule (CAM) interaction
smau04517
IgSF CAM signaling
smau04518
Integrin signaling
smau04530
Tight junction
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
smau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
118291086 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118291086 (itgb1a)
04514 Cell adhesion molecule (CAM) interaction
118291086 (itgb1a)
04517 IgSF CAM signaling
118291086 (itgb1a)
04518 Integrin signaling
118291086 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118291086 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118291086 (itgb1a)
04530 Tight junction
118291086 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118291086 (itgb1a)
04810 Regulation of actin cytoskeleton
118291086 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118291086 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118291086 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118291086 (itgb1a)
04515 Cell adhesion molecules [BR:
smau04515
]
118291086 (itgb1a)
04090 CD molecules [BR:
smau04090
]
118291086 (itgb1a)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118291086 (itgb1a)
Exosome [BR:
smau04147
]
Exosomal proteins
Proteins found in most exosomes
118291086 (itgb1a)
Cell adhesion molecules [BR:
smau04515
]
Integrins
Integrin beta subunits
118291086 (itgb1a)
CD molecules [BR:
smau04090
]
Proteins
118291086 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Anemone_cytotox
Motif
Other DBs
NCBI-GeneID:
118291086
NCBI-ProteinID:
XP_035474899
LinkDB
All DBs
Position
21:9376586..9400800
Genome browser
AA seq
814 aa
AA seq
DB search
MLPRIQQHGAKMDLKLLLLSTLLGVICYSNAQKEGNECINANAKFCGECIQAGAKCGWCK
DPTFLKQGETVSTRCDELQSLLKRGCDEEMIENPHGMQKILKNKAVTNRRKAAEKLKPED
ITQIEPQKLSLTLRSGEPQSFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLM
LEMSKITSDFRIGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSDGK
KFNILVGQQQISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKL
GGIVLPNDGKCHLENGVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKN
LIPKSAVGTLSANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSRCKNGVVSEGE
SGRKCSNISIGDEVMFSISVTSKGCPMQAKSETIKIKPLGFTEEVEITLHFICECECNKE
GIKNSQLCHFGNGTYECGACKCNEGRVGRQCECSSNDVATEDMDRTCRKDNGTDICSNIG
DCVCGTCECKKRDNPDERYSGLYCECDNFNCDRSGNKLCGGHGRCECRVCVCDPMWTGSA
CDCSLDNNTCMASNKQICNGRGTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECVQC
RAFGTGEKKDTCERDCSYFNLIKVKDRDKLPQPNDASYPVMHCKERDANDCWFYYTYAVN
NNTEKEVHVVDTLDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEK
EKMNAKWDTQDNPIYKSPINQFQNPSYGRKAAAL
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctcggatacaacaacacggagccaagatggacctcaagctgctcttgttatcc
acattgttgggagtcatttgttacagtaatgctcagaaagaggggaacgagtgcatcaat
gccaacgccaaattctgcggggagtgcatccaggctggagccaaatgtggctggtgcaaa
gacccaaccttcctgaaacagggggaaaccgtgtcgacccgctgcgacgagctgcagtct
ctgttgaaaaggggctgcgatgaggagatgatcgagaacccgcacgggatgcagaagatc
ctcaagaacaaagcggtgacaaatcgtagaaaggcggcggagaagctgaagccggaggac
atcactcagatcgagccccagaaactcagcctcaccctccgatccggtgagccccagtcg
tttgacttgaagttcaaacgggcagaggattatcccattgatctgtactacttgatggac
ctgtcctactccatgaaggacgatctggagaacgttaagaacctgggaaccagtctgatg
ctggagatgtcaaagatcacctctgacttcaggataggttttggttcgtttgtggagaaa
acagtcatgccgtacatcagcaccaccccggccaagctgctgaacccatgcacgggcgat
cagaactgcaccagccccttcagctacaagaacgtcctgaagctgaccagcgacggaaag
aagttcaacatcttggtaggccagcagcaaatctctggaaacctggactctcctgagggg
ggctttgatgccatcatgcaagtggctgtgtgtggggagcagattggttggaggaacgtg
actcgtctgctggtcttctccactgatgctggcttccactttgccggagatggcaaactg
ggtggcattgtgctgccgaatgatggaaaatgtcacttggagaacggtgtatacacgatg
agtcactattacgactacccctccattgctcacctggttcagaagctgagcgacaacaac
atccagactatctttgcagtcacagaggagttccaacctgtttaccaagagctgaaaaat
ctgataccaaagtctgcagtgggcacgctgtcggccaactccagcaacgttatcaacctt
attatagacgcttacaactccctctcgtcagaggttattctggaaaacagcaaacttcca
gagggagtgaccatagcctacacgtcccgctgtaaaaacggagtggttagtgagggcgaa
agtggacgcaagtgctccaatatctccatcggagatgaggtcatgttcagcatcagtgtg
acatcaaagggctgtccgatgcaggccaagtcggagaccattaagataaagcccctgggc
ttcacagaggaagtggagattaccctgcacttcatctgtgaatgtgaatgcaacaaggaa
ggcatcaagaacagtcaactctgccactttggtaacgggacctacgagtgtggagcctgc
aagtgtaatgaaggacgcgtgggccgacagtgcgaatgcagcagcaacgacgtggccaca
gaggacatggaccggacctgccgcaaagacaacggcactgacatctgcagcaacatcggc
gactgtgtgtgcggcacgtgtgagtgcaagaagagagacaaccccgatgagcggtacagc
ggcctgtactgcgagtgtgacaacttcaactgtgaccgctctggaaataaactgtgtgga
ggacatggacgctgtgagtgcagagtgtgcgtctgtgaccccatgtggaccggcagcgcc
tgtgactgttctctggacaacaacacgtgtatggccagcaacaagcagatctgtaacggc
agaggaacatgtgaatgtggcacctgtaagtgcactgaccccaaattccagggtcccact
tgtgaaacctgtcctacctgtccaggagtctgtactgaacacaaagagtgtgtccagtgc
cgggcgtttggcaccggcgagaagaaggacacgtgtgagcgagactgcagctacttcaac
ctgattaaagtgaaggaccgtgacaagctgccgcagcccaacgacgcctcttaccctgtg
atgcactgcaaggagagggacgccaacgactgctggttctactacacctacgctgtcaac
aacaacacagagaaggaggtccacgtggtcgacacgctggactgccccgccggccctgac
atcatcccaatcgtagcgggtgtggtcgccggcattgtcctgattggcttagccctgctg
ctcatctggaagctgctgatgatcattcacgacagaagggagtttgccaagtttgagaag
gagaagatgaacgccaaatgggacacgcaagacaaccccatatacaagagtcctatcaat
cagttccagaacccgagctatggacgtaaagctgctgccctttga
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