Scophthalmus maximus (turbot): 118291144
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Entry
118291144 CDS
T09850
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118291144 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118291144 (spata13)
Membrane trafficking [BR:
smau04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118291144 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
118291144
NCBI-ProteinID:
XP_047185756
LinkDB
All DBs
Position
21:complement(2807665..2822606)
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AA seq
1324 aa
AA seq
DB search
MSRGPSVPLPSTDSRRKTESSSDPGSLILKVTCIGRDTIVYAEQNDRGLSTSEDPLPCFH
NTKADPLIRSRPLSDIYPFHGQSDRSAVPCLLSGCGAQVQPVTAGSPTDENKLNSINQSA
WTNPVIGPPEGKPYSSRIMRLFSNPRKGPVPAHSPTADSPISVHSNDGNSGTQSWSGLPG
IGVVDSFKKLRSSVLQGIQSRGATNRDDEHVPSSSQDMANGTSGANTEPSLNNGRNNLKT
AEGYSVPNGNFTVHKLAMMSQCGSDIEDYDDEENDEGDGLTRNTRFSRSIRRAYGAGRIS
LFDTGKGRVAGIGTNEAADGQKQDHTSEVNVQTQNTNHNTDVKVLNRMSRSAENLHIFKA
PFRRKAPSLGPPSPEDEPQRTALSNGTPNIQRTASASSVDLRCHTINCRKSSVKTKGPML
TLVGSMTDLTVRRRRSPSPNPTSPMSPLTRLHDDYSRRVPCLHTSERQRRPSPVRARVVS
VGHTTLVHHQPEQDVSPQQHQVLISPVSVDPLDGTENSPGASSHCDSLAVATTSGYEQTA
DCDSSPLSQKEPSQTEQTEAKSLPNKVTSEQQVREALIQTDEASPTTSSSTPPLSLTCLS
ESPKSPTSPTDATTTTAKTYSIKPRRRAGRPRPRPISDYGQLVSRKHSIPEEVAEKHAEE
RTESVSLHEDCRDKEAYGNGESPESTNGNVQCKRYRPISVTGVADLFPPDAEEKDDRLPS
PLSRPPIPSHQVPPYRAVSARFRPSALSQSTPIGLDRVGRRRLHRVLSDGVSECSATLDD
SVSEEEEEEGSFDELTDATPYLQPGVEMSVLNEWISSGHRVYAEALWDHVTMEEQELVFK
AGDVIRVLDASHKDWWWGRGADREAWFPSSFVRVRVNQEDSSAESVESVADQEDPAPRDT
HSSQHREQMRTNVVQEIMNTERIYIKHLKDICEGYIRQCRKHPDMFTELQLKTIFSNIED
LYRFQRQFLKDLEKQYNKDQPHLSEIGSCFLLQGEGFSIYSEYCNTHPVASAELHRLMKS
GRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDFSGVSKAY
EAMKNVASLINERKRRLESVDAIAHWQVAILRWEGPDVLERSSELIHSGELTRVVRQGKM
QQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDQTEVLDVPDGRNPDLGLTLRNALRLR
NASTLEFVCVLCCRKAQDKQRWLEAFAKERHRVKEDQEMGIEISEDQRKQAIANARRAKK
GKIKPIGYSGSVPPHHQNLHPLHQRHVTIPTSVPQQQVFSLAEPPKRKPYHLLYNITRSA
FFRK
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggggccccagtgtgccgctcccatcgacagatagcaggaggaagacggagagc
agcagtgatcctggtagtctcatactgaaagttacctgcatagggcgagatactattgta
tacgcagaacaaaacgacagaggcttgtccacaagcgaagaccctctcccgtgcttccac
aacaccaaagctgacccattgatccgaagccgacccctcagtgacatctacccatttcac
ggtcaaagtgacaggagtgcagtcccatgcctactgtctggatgtggtgcccaggtacag
ccggtgactgcgggttcccccactgacgagaacaaactgaacagcatcaaccagtccgct
tggaccaaccctgtcataggtccacctgaaggaaagccttactcctccagaattatgagg
cttttctctaacccgaggaagggccctgtccctgctcacagtccaaccgctgacagcccc
atctcagtccacagcaacgacggcaacagtggcacccagtcctggtcaggacttccaggt
ataggtgttgtagactccttcaaaaagctccgctcctctgtgcttcagggtattcagagt
agaggggcgacaaaccgcgatgatgagcatgtcccttcatcaagtcaggacatggctaat
ggcacaagtggggccaacactgagcctagtctaaacaatggaagaaataatttaaagaca
gcagagggatacagtgtgcctaatggaaattttactgttcacaagttggctatgatgagc
cagtgtggctcagatattgaggactatgatgatgaggaaaatgatgaaggagatggtctc
acgcggaacacgcgattctcaaggagtatcaggagagcttatggggcaggacgcatttct
ttatttgacacagggaaagggagagttgcaggaatcggcacgaacgaagctgcggacggt
cagaaacaggatcacacatccgaggtcaatgtccagacccagaacacgaaccacaacaca
gacgtgaaggtgctgaacagaatgagcagaagcgccgaaaatctacatatatttaaggca
cctttccgacgcaaagccccatctctgggtcctccttcccctgaggatgaaccacagagg
actgccttgtcaaacggaacgccgaacatccagaggacagccagtgcctcctcggtggat
cttcgatgccacactataaattgtagaaagagctctgtgaagacaaagggaccgatgctg
acgctagtaggcagcatgactgacctgactgtccgacgcaggcggagtccctccccaaac
cctacatcgcccatgtctcccctgacccgtctccatgacgactactcccgccgcgtgcct
tgcctacacaccagcgaacggcagcgccggccttcgcccgtcagagcccgggtcgtgtct
gtcggacacacaacgctggtgcatcaccagccggaacaggacgtaagcccgcagcagcac
caggtcctcatcagcccggtctctgtggatcccttagatggaacagagaattcacctggt
gcctcttctcactgtgactcgctggctgtggcaacaacaagtggctatgaacagacggca
gattgtgattcatcgccgctcagccaaaaggagccttcacaaacagagcagactgaggcc
aagtcactaccaaacaaggtgacatcagaacaacaagtgcgagaggcacttatccaaacc
gatgaagcgtctccgacaaccagcagcagcacacctcctctctccctaacatgcctctcg
gagtcacccaagtcccccacgtcgcccacagatgcaaccacgactaccgcaaagacgtac
tccatcaagcctcggcgaagggccggtcgtcctagacctcggcccatttctgactatggg
cagcttgtatccaggaagcactccattccagaggaagtggcagaaaagcatgctgaggaa
aggacagaaagcgtatcgttgcatgaagactgcagggacaaagaggcctatgggaacgga
gagagccctgagagcacgaatgggaacgttcagtgcaagaggtatcgacccatctcggtg
acaggagtcgcggatctgttcccccctgacgctgaggagaaggacgaccgtcttccttct
cccctgtcacggccgcccatcccctcccaccaggtgcccccctaccgagcggtgtctgcc
agatttcgcccctcggccctttcccaaagcacccccatcggactggatcgggttggacgg
cggaggctccacagagtgctcagcgatggtgtgtctgagtgctcggcgacgcttgatgac
agtgtgagtgaggaggaggaggaggagggcagctttgatgagctcactgatgccacgccc
tacctccagccaggggtggagatgtctgtgctcaacgagtggataagctcgggccacagg
gtgtacgctgaggctctctgggaccatgtgaccatggaagaacaggagctggtcttcaag
gctggagatgttatccgcgtcctggatgcctcgcacaaggattggtggtggggcaggggg
gccgacagggaggcctggttcccctccagctttgtgagggtgcgagtgaaccaggaagac
tcgagcgcagagagtgtcgagagcgtagcagaccaggaggatccagctccccgggacacg
cacagctctcagcacagggagcagatgagaaccaatgtggttcaggaaatcatgaatact
gaacgcatctacatcaagcacctcaaagacatctgtgagggttacatccgccagtgccgc
aaacacccagacatgttcaccgagctgcagctcaagaccattttcagcaacatagaagac
ctatacagatttcagaggcagtttctaaaggacctggagaagcagtacaacaaagaccaa
ccacacctcagtgaaataggctcttgttttctcctgcagggggagggtttctctatctac
tccgagtactgtaacacccatccagtggcgagtgctgagctgcatcgcctcatgaagtcg
ggccgatataaacatttttttgaggcctgtcgcctcctccagcagatgatcgacatctcc
atcgctggcttcttgctcacgcccgtccagaaaatctgcaaatatccgctgcagctggga
gaacttctcaagtacaccccaaaggaccacagtgacttcagcggagtgagcaaagcatac
gaggccatgaagaatgtggccagtctgataaacgagaggaaaagacggctcgagagtgtc
gacgccattgctcactggcaggtcgccattctgcgctgggaggggccggacgtgctggag
cgcagttcagagctgatccactctggggagctgactcgtgtcgtccgacaaggcaaaatg
cagcagcgcagcttcttcctgtttgaccaccagttggtcttctgcaaaaaagacgtgctg
cgcagagacctgctccactaccgcggacggttggatatggaccagaccgaggtgctggac
gttcccgacgggcgcaacccagacctgggcctgaccctgcggaacgctctgcgcttgcgc
aacgcctccactctggagtttgtgtgtgtgctgtgctgcaggaaggcccaggacaagcag
aggtggttggaggcgtttgccaaggagagacacagagtgaaggaagaccaagaaatggga
attgaaatcagtgaagatcaaagaaaacaggccattgctaatgccagaagagccaaaaag
ggaaagatcaaacccattggttactctggttctgtccccccccaccaccaaaaccttcat
cctcttcaccagcgtcacgtcaccattccgaccagcgtgcctcagcagcaggtcttttcg
ctggccgagcccccaaaacgaaagccttatcacctgttgtacaacatcacccgcagcgcc
ttctttaggaaatga
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