Scophthalmus maximus (turbot): 118291231
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Entry
118291231 CDS
T09850
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118291231
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118291231
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118291231
NCBI-ProteinID:
XP_035475192
UniProt:
A0A8D3CXP9
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Position
21:11354959..11368432
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AA seq
595 aa
AA seq
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MDGMGDVAVGVKRGSDELSMYNSPNSGMSSISDGASNGSDSKKLKVEEAPPSRVLHIRKL
PNEASETEVVALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMINYYTTVSPQVRNAPV
FIQYSNHKELKTDAGNQRTQAMLQAVSAVQSGGSPSSDVQDALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPSVAHAFSKDSNSLLGKIPGALS
PLSAAAAAAAAAGRVALAGQTGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLGLSVYVRALQRRISARYISFRYSNEPPEWPKDVREDHPRDSVE
APDGGTAPRRPGRPGPDQGLCQFPAPSLQKTWIQKLPEHLPALCHAPPLQHPTRCDGGRP
ATALLQRRRHRESVQVFPGSQNGSDPDVDSGGGHPGPDRSAQLQHGRQPAPESLLLQVHH
LREREPTKLLTGERGVRCLGSRSEISQPVSGHWGLGGWWWWRTTLIESFFLFGFC
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatgggtgacgttgcagttggagtgaagagaggatcagacgagctgagtatg
tacaacagtcccaactctggcatgagcagtatcagcgatggggcttccaacggcagcgac
agtaaaaagctcaaggtggaggaagcccccccgtcccgcgtgctccacatccggaagctc
cccaacgaggcgtcagagacggaggtcgtcgccctcggcctgcctttcggcaaagtcacc
aacatcctcacgctaaagggaaagaaccaggcatttttggagatggggacagaggaggcg
gccatcactatgatcaactactacaccacagtatctcctcaggtccgcaatgcccccgtc
ttcatccagtactccaatcacaaggaactcaaaacagatgctggaaatcagcggacccag
gccatgctgcaggcggtgtcggcggtgcagtctggcggctcgccaagctccgacgtgcag
gacgctctcgccgcagcctccagccccgtgctgcggatcatcatcgacaacatgttctac
cccgtaacgctggatgtgctgcaacagattttctccaagtttggcacagtgatgaagatc
atcacattcaccaagaacaatcagtttcaggccctgcttcagttcagtgatccagtcaat
gcacagcaggccaaactggcattggatggtcagaacatctacaactcgtgttgcacgctg
cgcattgacttctccaagctggtcaacctgaacgtcaagtacaacaacgataagagtcgt
gactacacgcggcccgagctccccgccggcgacggacagccaagcctcgacccctcggtg
gcccacgccttcagtaaagattctaactccctcctcggtaagatcccaggagccctgagc
cctctaagcgcggcggcggcagccgctgctgctgcagggcgggtggccctggctggacag
acagggtccagcggggtcctgctggtcagcaacctcaacgaggagatggttacgccccaa
agtctgtttaccctcttcggagtgtacggcgatgtccagagggtgaagattctgtacaac
aagaaggacagcgctctcatccagatgtccgatgccaaccaggcgcagctaggactgtct
gtttatgttcgagcgctacagagaagaatatcggcgagatacatttcatttcgatacagc
aatgagccacctgaatggccaaaagatgtacgggaagatcatccgcgtgactctgtcgaa
gcaccagacggtggcactgccccgcgacggcctggacgaccagggcctgaccaaggactt
tgccaattccccgctccatcgcttcaaaaaacctggatccaaaaacttccagaacatctt
cccgccctctgccacgctccacctctccaacatcccacaagatgtgacggaggacgacct
gcgactgctcttctccaacgccggaggcaccgtgaaagcgttcaagtttttccaggatcg
caaaatggctctgatccagatgtcgacagtggaggaggccatccagggcctgatcgatct
gcacaactacaacatgggaggcaaccagcacctgagagtctccttctccaagtccaccat
ttgagagagagagaacccacaaaactcctgacaggagagagaggcgttcgctgtctcggg
agccggtcggaaatctctcagcctgtgtctggacactgggggttgggggggtggtggtgg
tggaggaccacattgatcgaatcatttttcttgtttgggttttgttga
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