Scophthalmus maximus (turbot): 118291237
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Entry
118291237 CDS
T09850
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smau03037
]
118291237 (rttn)
Cilium and associated proteins [BR:
smau03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118291237 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
118291237
NCBI-ProteinID:
XP_035475212
LinkDB
All DBs
Position
21:complement(4138984..4170439)
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AA seq
2259 aa
AA seq
DB search
MLELLFLLFRKCSLKQYTLDMELSPLIKKIGHSLVEIRVRALKSIVCKLDHSLISVSDIV
QEKMLFVYLLEWFNFPEVPMQEEALELLTTLSKHPSAAQMLRDVGAVDFLTQLAPNVEPR
LRAVISGTLDQLFQLPDLLPSKTTVYSHGPHSTAPTAPTVVPPEDFSKMGYFHKRMLASK
DIPPHKIPVHETVRCLKFSVFPWLTLTNTDRHILSSNESSLRSNNPNMVRTTCDLLCDVI
MQDFPPEIFLQRPSIVKSLLSLLRVGSGKGEPRFLHSQALSCLRQLCAGLRRRLRFHQDP
SFYSTKHDPVSQNSSFSCSQEVRGTQRSQASSPGVECSPRPSVVGRTGQRARGDGQDGDA
ASNSGSSHRGGAALQAPVQTPQSPADSAHVELPDLGVEDVLELQLQQLTLAQFTVAIMEH
AIPLLKTEGSHVFHRVLELLCDAIPLLGDSVCELVWDDRSLVGMELKEKLQAFMELLGDI
LSYHQSHRADTPHSSQIHHRMAYMGTAIFTIKLLQTILPTEKAGDNLPESTATAIFHLCL
DTSLGSLLPSVQENAVAYLEQVNSDHHDLYRGVTRAALWMESTCNFLKEAEAEGEKNWLE
LLELADLAIDGLPFHQHLPIVKECVHICSYLWKFDQPSPLLQTESQKLLLKLLSHPLLPV
KTETYTCALNLVKDSVGIQNVSRQEQGSCDGVNFLLHYRVLYEISAFGLQDSAEKVNVAA
KDILLFLLKGRLMMTASAWDRFNEALYPVMPILQGYVGTEESLGNCVLLISDTSDVARDD
VFPSTAKLKAALRLLFTKQPAVRIAAVQQVTPHLTNADEVKTVRPDLDQAVMSTLPNLYC
LRNPLDISLDTNSKSVLKVESVEKLFCILSSDTVDISLRRSAAEQLSVVLQDTTMHPVLK
SLGITDTVISFIMESVKGNKSSDCLLEPCVCILRKLVYADPSLRHSLAQRNLLLLTLLRA
SLILKENKSSGNEIAVLMSLLLFDEIASIEIWSDKRSADVTLTPFSLPLTVIRRYNIPFQ
AASHHAVSPYRCVLPPSSGLLTLAPARQALQVAWNTAWHSGIDNLLEELRGISTGDPEFH
PDLKLSEAQILSLQATHLPAALQDCIQAIVTAAAHSSVTSALSRLSLYLLIDRLSLPHIP
THSCRGTLHSLSWQAAVSRFLQVRPACVEDERLLVGVIGFLNAYFRQINTESASDPDDKD
LRWILELLLNQETVSLLSLLLDVEKQTSTENTGELEQLKNHVSQRLQRELTSFFNTLLLR
LTHTTDRLCLALAGPFKSQLAVCLLRSLRVSDAPCFYGLPSLERTLQGMVSLTAQPGWSS
HCPDLEPPSLCSKYLSGLLEVISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMLAEN
KDQNFISQWSLGGEAAVEEPSNCQLGLAWLIPLWVDRDQEVKFASLALGAALSSVPSGCR
ALCASCQNISGGLWGTLLNILLDQQESSMVRREAAFILQNLLVMPMPANAEEAKDSDWQH
PCVHDEVSGVSLVGLPALQALLYHCQYFQHVALSASACYRGRYTFHLQPASSGATQESES
LDSENSLWSWRCDPPAPSVNSRRPSSSLSTSSTLIRGSGPHTPNAFSSLSISDDAPASRL
MAQGQSDTDNSESVNSQDSRQGESSAVEPVVMVTPDLLTAHCGLLTNLLSILSDFTLSAI
RHNWLLPALASLVDVRPIEKCVNELNSPNVLPGEREDIKGQFVTLLQFLSSFSKLLQSCV
TVSQELIPELDVLKQLLTTLVAVLMLDTRGLGQNLCKIDAGTQNTVCLCWADVFMLLATL
VRRDSSAAYPSVSAALGKRWRTFAGTLSLCVTEKFADPLLHTVALHFLSAIFTEETKSRG
DEAVTSNSMCAAALSDIVNGPPASQLCELLLQSFEKRSHQDPLKKLTARALLTLLACSPT
AQNHAAKAGLIDSCVEQMKQTHSHLHLESVRPSKASHRKKEEGRLKGIKLTVEILRSALY
RSDECKVVASDARLTQALYALWPWFLLDDPTMEAVLELLCVYTANCTTACNALCGSVPPG
SKGTSGSSLMHAVVKLASGVAPDNGTVQKLAFSLLTNLAMSRDCRGLLQKNNFLQAFMSV
PIPKAGGGGCAGSLLGQWLKLLVSLSFAEDIQQSILRVTGVLELLADLAPQRRHALLTLH
NLCFWPANKPHVISSDKAMQSLLCCLGSRDVETRCMGASALWALLHNNQRAKTTLKCPSI
RLRIEEAHAVSRKDAENRQEPTSAYLLKCLKNLTQLLNN
NT seq
6780 nt
NT seq
+upstream
nt +downstream
nt
atgctggagcttctttttttactttttagaaagtgttctttaaaacaatatacactggac
atggagttatcgccccttataaagaaaataggccactcgctggtggagatacgagttcga
gcgctgaagagcatcgtgtgcaagctggaccactccctgatttccgtctctgacattgtc
caagagaagatgctgtttgtgtacttgctggagtggttcaatttccccgaggtgcccatg
caggaggaggcgctggagctgctcacaaccttatcgaagcatcctagtgcagcccagatg
ctgagagacgtcggggccgtggacttcctcactcagctggctcctaacgttgagcccagg
ctgcgagctgtcatcagcggaaccctggaccagctgttccagctacccgatctactcccc
agtaaaacaacagtctactcacacggaccacatagcacagctccaacagcccctacagtt
gttccacctgaagatttttctaaaatgggctatttccacaagagaatgctagccagtaaa
gatataccacctcacaagatcccagtgcatgagactgtgagatgtctgaagttctctgtg
tttccatggctgactttgacaaatacagacagacacatactttcatccaatgagagttcc
ctaaggagcaacaacccaaacatggtgcggaccacatgtgatcttttgtgtgatgtcatc
atgcaggactttcctcccgagatcttcctgcagaggccaagtattgtaaagagccttctg
tccctgttgagggtgggttctgggaaaggtgagccgagattcctccactcgcaggctctc
tcctgcctgcggcagctttgtgcggggctgaggaggagactgcgctttcatcaagatcca
agcttctactctacaaagcatgacccagtgtcccagaactcctccttctcctgctcccag
gaggttcgtgggacccagcgctcccaggcctcctccccgggtgtagagtgctcgccccgg
ccctctgtagtgggacgcacgggccaaagagccaggggtgatggccaagacggagatgca
gcgtccaacagtggcagctcgcacagaggtggagctgcactccaggcccccgttcagacg
ccccagtcacctgcagactcggcccatgtggagcttcccgacctgggtgtggaagatgtc
ctggagctgcagttacagcagctcactttggcccagttcactgttgccatcatggagcat
gctatacctcttctcaagacagagggttcgcatgtgttccatcgcgttctggagctgctg
tgtgacgccatccccctgcttggggacagcgtttgcgagctggtctgggacgatcgcagc
ctggtggggatggagctgaaggagaagctgcaagccttcatggaactattgggggatatc
ctgagctaccatcagagccatcgagcagacacacctcacagctctcagattcaccacaga
atggcctacatgggcactgccatattcaccattaaactcctacagaccatcctccccacc
gagaaggctggtgacaatcttccagaaagcactgcaacagccattttccacctatgcttg
gacacatcattgggaagtttattacccagcgtgcaagagaatgcagtagcgtacttggag
caggtgaactctgaccaccatgacctctacaggggggtgacccgcgccgccctctggatg
gagtccacctgcaattttctcaaggaagctgaagctgagggagaaaagaactggttggag
ttactggagctggcagacctagccatcgacggcctcccgtttcaccagcacttacccatc
gtcaaggaatgtgttcacatctgctcttacctatggaagtttgatcagcccagtccgctt
ctccaaacggagagccagaaactgctccttaagttgctgtctcatcccttactgcccgtt
aagacggaaacctacacatgcgctctaaacctggtcaaggacagcgttggcatccagaat
gtgtcacgacaggaacaaggatcctgtgatggagtcaacttccttctccactacagggtg
ctctatgaaatcagcgcttttggacttcaggactctgcagaaaaagtgaatgtcgctgcc
aaggatatcctgctattcctgctcaagggacgattgatgatgacagcatccgcctgggac
agattcaatgaggcactttacccggtcatgcctatattacagggttatgtcggcactgaa
gagtcactgggtaactgtgtcctgctgataagtgacacgtcggacgtggcaagagacgac
gtgtttccaagtacagccaagctcaaagcagcgctccgactcctcttcactaaacagcct
gctgtgagaatagcagcagtgcaacaagtgactccccacctaactaacgctgatgaagtt
aaaacagtcagaccagacctggatcaagcggtgatgtccacactgcccaatctctactgc
ctccgaaatcctttggacatctcactggatacgaacagcaagtctgtcctcaaggtggag
tcagtggagaagctgttttgtatcctgtcctcagacaccgtcgacatctctctgagaaga
tcggctgcggaacagctgtctgttgtgctgcaagacacaacaatgcacccggtgctgaag
agtctcggaataacagacacagtcatttctttcattatggagagcgtcaaaggcaacaag
agctcggattgcctgctggagccttgtgtatgtatcctgaggaagctggtgtacgctgat
ccgtctctgaggcacagcctggcgcagcgcaacctcctgctcctcacactgcttagggca
tccttgatattaaaggagaacaaaagcagtggaaatgagatcgctgtcctcatgagttta
ctgctatttgacgagattgccagcattgagatatggtcagacaaacgcagcgcagatgtg
actctcacaccgttctccctgccactgacagtaattcgcagatacaacatccctttccag
gcagcgagtcatcacgctgtcagcccgtaccgctgtgtgctgcctccatcctctggcctc
ctgaccctggcccctgcccgccaagccctgcaggtggcctggaacaccgcatggcattct
gggatagacaacctcctcgaggagctgcgcggcatctccaccggggatcctgaatttcat
cccgacctaaagctgtcagaagcacagatcctgtcgctgcaggctacgcaccttcctgct
gcgctgcaggactgcatccaggccatcgtcacggcagcagcacacagttctgtgacctct
gccctctccaggctcagcctctacctgttgatcgacagactgagcctcccgcacatcccc
acccacagctgcaggggcaccctgcactccctcagttggcaggcggcagtgagcaggttt
ctccaggttcgcccggcctgtgtcgaggatgagaggttgctggtgggcgttattggattt
ttgaatgcctacttcagacagataaacaccgagtctgcatcggacccggacgacaaggat
ctgcgctggatactggaactgcttctcaaccaggagacggtgtccctccttagtttgctg
cttgatgtggagaagcagacctcaactgaaaacacaggggaactggagcagctgaagaac
cacgtcagccagaggctgcagagagaactcaccagcttctttaataccttactcctccgc
ctaacgcacaccactgaccggctgtgtttggcactagcgggccccttcaagagccagctg
gccgtctgtttgcttcggagcctgcgggtgtccgatgccccgtgcttctatggccttccc
agcctggagaggacactgcagggcatggtcagtctcactgcccagcctggctggagctcc
cactgccctgacctggagcccccctccctctgctcaaagtatctcagtgggctgttagag
gtgatctcctctttttatgttgagtggggaggcaactccatgtccttcatggggaaaggt
gtgacaaagaacgctgtcatatgcttgctccacctgtcccatgagatgttggctgaaaac
aaggaccagaacttcatatcccagtggtctttggggggtgaggcagctgttgaggagcct
agtaactgtcagttaggtttggcctggctcatcccactatgggtggatcgagaccaagag
gtgaagtttgcaagtttggctctgggcgcagctctgtcctcggtgcccagcggatgcagg
gctctgtgcgcgagctgtcagaacatcagtggaggtctgtggggcacattgctcaacatc
ctgcttgatcagcaggagagcagcatggtccgcagagaggcggcgtttatcctgcagaac
ttgctggtgatgcccatgcctgccaacgcagaggaggccaaggactctgactggcagcac
ccgtgtgtccacgacgaggtgtctggcgtctctctggtgggcctcccggcgctccaggct
ctgctctaccactgtcagtacttccagcatgtggctctctctgcctccgcttgttaccga
ggcaggtacactttccacctccaacctgccagcagtggcgctacccaggagagtgagtca
ctggattcagagaactctctgtggtcctggagatgcgacccaccagcaccctctgtcaac
tcaaggagaccttccagctccctctctacatccagcaccttgatcagagggtcggggcca
cacacccctaatgctttctcttcattgagcatctcggatgatgcccctgccagcaggctg
atggctcaaggccagagtgacacagacaacagcgagtcagttaactcccaggactcccgg
cagggcgagtcctcagctgtggaacccgtcgtcatggtaacgcccgaccttctgacggcc
cactgcggcctgctgactaatctgctgtccatcctgtcagatttcaccctcagcgccatt
cgacacaactggctcctgccagccttggccagtctggtggatgtcaggcccatcgagaaa
tgtgtgaacgagctgaattcacccaacgtactaccaggagagagagaagacatcaagggc
cagtttgtcaccctactgcagttcctgtccagcttctctaagttgctgcagtcatgtgtc
acagtgagtcaggaactgattcctgagctggacgtcctgaaacagctgttgacgactctg
gtagcagtgctcatgctggacaccagaggattaggtcagaatctctgtaaaattgatgca
ggtacccagaacacggtttgtctgtgctgggcagacgtgtttatgctcctggctactctg
gtgaggagggacagctcggcggcttacccatctgtctctgctgcgctggggaaacgctgg
cggacatttgcaggaacattatcactgtgtgtgactgagaagtttgcagatcctctcctc
cacactgtggcactgcatttcctctctgcgattttcaccgaggagacgaagagtcgaggt
gacgaggcagtaacctccaattccatgtgtgcagcagctctgtctgacatcgtgaacggt
cccccagccagccaactgtgtgaactgttactgcagagttttgagaagaggagccatcag
gaccctttaaaaaagctgacagctagagctctgttgaccctgctagcgtgcagtcccaca
gcccaaaaccacgcagccaaagccggtttgattgatagctgtgtggagcaaatgaagcag
actcattcccatctccacctggagtcggtccgacccagcaaggcctctcaccgcaaaaag
gaagagggccgtttgaagggaatcaagctgactgtggagatcctgcggagtgctctttac
cgcagcgatgaatgcaaagtggtggcttcagatgcacgcctaacacaggctctctatgct
ctttggccttggttcctattggacgaccccaccatggaggcagtgctggagcttctatgc
gtctacacggccaactgcaccacagcatgcaacgctctctgcgggagtgtgccgccagga
tcgaagggcacctccggtagctctctgatgcacgctgtcgtgaagctggcctcgggggtc
gcccccgacaacggcacagtccagaagctcgccttctctctcttgacaaacctcgccatg
tcccgcgactgcagaggccttctgcaaaagaataacttccttcaggccttcatgtcggtg
ccaattcccaaggccggtggtggtggttgtgctgggagcttactgggccagtggctgaag
ctgctggtcagtctgtcgttcgcggaggatatccagcagagtatcctcagggtgactgga
gtcctggaactgctggcggacctggcacctcagcggcgacacgcgctgcttacgctccac
aacctctgcttctggcctgccaacaagccacacgtcatttccagtgacaaagccatgcag
tcgttgctatgctgtctgggaagcagagacgtggagactcgctgcatgggagcgtctgcg
ctttgggcattgctccacaacaatcagagggccaagacaactctgaagtgtccctccata
cgattgagaattgaggaggcgcatgccgtctccaggaaagatgcagagaacaggcaggag
ccgacgagtgcctacctgttgaagtgccttaaaaacctcacccagctgcttaataactga
DBGET
integrated database retrieval system
