Scophthalmus maximus (turbot): 118291305
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Entry
118291305 CDS
T09850
Name
(RefSeq) SH3 domain-containing protein C23A1.17-like isoform X1
KO
K11458
polyhomeotic-like protein 3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118291305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118291305
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118291305
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
zf-FCS_1
SAM_PNT
BatD
Motif
Other DBs
NCBI-GeneID:
118291305
NCBI-ProteinID:
XP_047185790
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Position
21:complement(14940682..14955109)
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AA seq
1324 aa
AA seq
DB search
MDAAGSNLQDDAEFRGSVSQCWTMDKDPARRSHHGDATNGSSPTTPTPPRLTPNPTLLDS
PASTLTPATSSPPPPLTPAPSVISSHGPKAATASPHILVPAPPKLTSTAIPALRTYSRPI
LPSPTTGVFKKSPPAQTSSASTSLLPPSNPSSSSSPSSSSSSSHAVATTASPLVSSACLT
NGNTRPVSTPTSAPITPFHTPASPPGRQVPQPHPVGTPGLVRANQSPSPVRQRVSQQTLL
LGKGLRGSGQDQVLLRAQMLILTSAMRPAPSSSSSSSSSSSSSSSSSLSSNPASAQLQSL
TLRPSPPGTLTIPPTLRLKAPPPLSRPHAALFPPLRPRPKPGTTATESPTTPGRHLAVPP
PTLYSPVRAVPLRPRLHSPIGHRAAAPRQTSGLQPIAAAAPPPSSQAPPSNQAPPISRPP
AALRNCPLTQTVPGPGQSQRRSLSVTNPSSHFDRSPSAARQLQIIALSSGRQPRPGVYAH
ASVQPPPPVAEPPELSTKSKRTFGSEEDPLLLPRPPNPSLPKTTSPLPSPPSLLSPASPP
RHQAGTHSQTPVREAKESEEQTERGRGARQGTRDEGGVGEDPRLERDDQRERAREEKRPG
QEAEAGREEEQMEVTEEGRSEDGEEEKRMEQEEEAAESAMDQSEEPTAGQVLRRHWSTDP
IPTPDPIKESSLKLKPDLGLVSASAPFQTSAPIPASVPAPPPVPAQVPAPPPVPAQVPAP
PPVPAQVPAPPPVPAPPVPAPPPVPAPPPVPAQVPAPPPVPAPPPVPAPPLVPAQVPAPP
PVPAQVPAPPPVPAPPPVPAQVPAPPPVPAPPLVPAQVPAPPPVPAQVPAPPPVPAQVPA
PPPVPAQVPAPPPVPAQVPAPPPVPDASVQTQRLHESHGELQPVSQEDFCENMSSQSDNQ
SALSSLSSQSPPCSPFIAPPTEIPPPLLHAQSAHPADRGLSQRKPEKLVVGAAEESRRLA
GAETEAEPLGQSEDESGSFDQSLSSPWEPRAWPEGRQVLTHLVEGFVIQEGLQPFPVNRS
SLLVAPEQVTTPQEVNGTNGTSALPVTDMVKQTEPSSESDEEDGGDADEPGTRSSHRDRT
VLHCQFCGKRGHAHNFMRSKRFCSTSCARGFNVRLTKRLRALSAGGRSERPRPALLNRAE
SVPGKPLLLRLPRDLWSAGRREKEGKKKEAEDEDEEEEEEDMAGGGEEEEDDDDDGGGGE
EDPAVAVTARVERRAVRRARRASAPAMTTISSSSSSSSSSSSSSSSAAPTTTFTPAPSQW
SVEDVTAFIHTLPGCGDVAEAFRLQEIDGQALLLLTEDHLMTSMNIKLGPALKICAHINA
LRNQ
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgggagtaacctgcaggacgacgccgaattcagaggtagtgtgtcacag
tgttggacgatggacaaggatccggctcgtcggtcacatcacggagacgccaccaatgga
agcagccccaccacccccacgcctcctcggctcacccccaaccccacgctcctcgactcc
ccagcgtccacgctgacgcccgccacctcctcgcctcctccccctctcacccctgcaccc
tccgtcatctcgtcccatggccccaaggcggcgacggcgtcgccccacatcctcgtcccc
gctccccctaagctcacctccaccgccatccccgccctccgcacgtactctcgcccgatc
ctgccctcccccacgactggcgtcttcaaaaaatctcctcctgcacaaacctcctccgcc
tccacctctcttctcccaccatccaacccttcctcttcctcttccccttcctcttcctct
tcctcttctcacgccgtcgccaccacggcctcccccctcgtctcctccgcctgcctgacc
aacgggaacacgcggcctgtgtccacgccgacctccgcgccaatcacgccctttcacaca
ccagccagtccacctggcagacaggtaccacagcctcaccctgtgggaacacctggtctc
gtgcgagccaatcagagcccctcccctgtcaggcagagggtctcccagcagacactgctc
ctggggaaaggtctcagggggtccggccaagaccaggtgctgctcagagctcagatgctg
attcttacgtctgcaatgcgacctgccccatcctcctcctcctcctcctcttcttcctcc
tcctcctcctcctcctcctcactctcttccaaccctgcttccgctcagctccagagtctc
accctgaggccttctccccccgggaccctcaccatcccccccaccctgcgcctcaaggcc
ccgcccccactctctcgccctcacgccgcgctcttcccccctctcaggccgcggccgaag
cccggcaccacggcaacggagagcccgaccacgcccggccgccacctcgccgtcccgcct
ccgactctctactctccggtacgagccgtccctctgaggcccagacttcactctcccatc
ggtcaccgagcggcggcgcctcgacaaacctctggtctccagccgatcgccgccgctgct
cctcctccctccagtcaggccccgccctccaatcaggccccgcccatcagccgaccgcct
gccgctctgaggaactgtccgttaactcaaactgtgcccggtcccggacagagccagcgc
agatcgctgtccgtcaccaacccttcctcccacttcgatcgttcgccgtctgcagccagg
cagctgcagatcatcgccctctcctcgggacgccagccccgccccggagtgtacgcccac
gcctcggtgcagccgccgcctcccgtcgcagagccccccgagctttccaccaaatcaaag
agaactttcggcagtgaggaagacccactccttcttcctcgtcctccaaacccctcgttg
ccaaaaacaacctctcctctgccgtcgccaccgtctctcctgagtccggcctctccgcca
cgtcatcaggccggaactcattcacagactccggttcgcgaggcgaaggagagcgaggag
cagacggaaagagggcgaggggcgcgacaaggaaccagagatgaggggggcgtcggtgaa
gacccgcggctggagagagatgaccaaagagagcgggcgagggaggagaaacgaccgggg
caggaagctgaggcaggaagagaggaggaacagatggaagtgacggaggaaggccggagt
gaggacggcgaggaggagaagaggatggagcaggaagaggaagcagcagagagcgccatg
gaccagtccgaggagccgaccgccggtcaggttctccgtcggcactggagcacggatcca
atcccgacgcccgatcccatcaaagagtccagcctcaaactcaaacccgacctgggtctt
gtttccgcctcagctccgttccagacctcagcccccatcccggcttcagtcccagcaccg
cctccggtcccagcacaggtcccggcaccacctccggtcccagcacaggtcccagcacca
cctccggtcccagcacaggtcccagcaccgcctccggtcccagcaccgccagtcccagca
ccgcctccggtcccagcaccacctccggtcccagcacaggtcccagcaccacctccggtc
ccagcaccacctccggtcccagcaccacctctggtcccagcacaggtcccagcaccacct
ccggtcccagcacaggtcccagcaccgcctccggtcccagcaccacctccggtcccagca
caggtcccagcaccacctccggtcccagcaccacctctggtcccagcacaggtcccagca
ccacctccggtcccagcacaggtcccagcaccacctccggtcccagcacaggtcccagca
ccacctccggtcccagcacaggtcccagcaccacctccggtcccagcacaggtcccagca
ccacctccggtcccggacgcctctgtccagactcagaggctacacgagtctcacggggag
ctccagcccgtcagtcaggaggacttctgtgagaacatgtcgtcccagtccgacaaccag
tcagctctgtccagcctctcctcccagtctccgccctgctcgcccttcatcgccccgccg
acagagatccctcctcccctcctccacgctcagagcgcccacccggccgaccgcggccta
tcgcagcgcaagcccgagaagttggtcgtcggagcggccgaggagtcgcggcgcctggcc
ggggccgagaccgaggccgagcccctcggccaatcagaagacgagtcgggaagctttgac
caatcgctgagtagcccctgggagccgagggcgtggcctgagggacgacaggttctgact
cacctggtggaggggttcgtcatccaggaggggctccaaccttttcctgtgaaccgctca
tccttgctggtcgcccccgagcaggtgaccacgccacaggaagtgaacgggaccaatggc
acgtcggcgctgccggtgacggacatggtgaaacagacggaaccgtccagcgagtcggac
gaggaggacggaggcgacgcggacgaacccggcacacggtccagtcacagggaccgcacg
gtgctgcactgccagttctgtgggaaaagaggccacgcccacaacttcatgcgatccaag
cgcttctgctccacgtcctgcgctcgcgggttcaacgttcgcctgacgaagcgtctgcgg
gctctgagcgcgggcggtcgctcggagaggcctcggccggcgctcctgaaccgggcggag
tcggtgccggggaaacctctgttactgcggctgcctcgcgatctgtggagcgccggtcgc
cgcgagaaggagggaaagaagaaggaagcagaagacgaggacgaggaggaagaggaggag
gacatggcgggaggaggggaggaggaggaagacgacgacgacgatggaggaggaggagaa
gaggatcctgctgtcgccgtgacagcgagggtggagcgccgggcggttcgcagagcgagg
agggcgtcggcgcccgccatgacgaccatctcctcctcctcctcctcctcctcctcctcc
tcctcctcttcctcctccgccgcgcccaccaccacgttcacgcccgccccctctcagtgg
agcgtggaggacgtgaccgccttcatccacacgctgccaggctgcggcgacgtggccgag
gcgttccggctgcaggagatcgacggccaggctctgctgctgctgaccgaggaccacctg
atgaccagcatgaacatcaaactgggaccggctctgaagatctgcgctcacatcaacgcg
ctgaggaaccaatga
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