Scophthalmus maximus (turbot): 118291557
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Entry
118291557 CDS
T09850
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118291557 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118291557 (arfgef1)
Membrane trafficking [BR:
smau04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118291557 (arfgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
TPR_28
Motif
Other DBs
NCBI-GeneID:
118291557
NCBI-ProteinID:
XP_035475763
UniProt:
A0A8D3D9Q9
LinkDB
All DBs
Position
21:complement(3134567..3182384)
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AA seq
1952 aa
AA seq
DB search
MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGEGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDNT
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQHSPVTQHTEPDSPQLQTHIHPPAKGSSQEANGPVSPPTPSINIPSTPSTPSTPAP
EGSSRSVSGEQEEQGEQGPPVYESPDPENGSEFCVAENEQTEADQATAAAHNAAAQQHPE
AGEEDEVETPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESVGESEPAESEP
EPGEAVTEGTQISLDDEGTLGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSNDTQES
GAAPGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSI
LQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQI
EVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLV
NDLSKIAQGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQE
KPPEQESTETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIE
QGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVM
YAYVDQMDFQGKDFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADT
AYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIA
MKETKELTMKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHV
RPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFCIQLERDAYVQALAR
FTLLTASSGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVK
ARYISGTVRSKEGFLASTKEQSSDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDR
IFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRI
WEVIGDHFNKVGCNSNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKN
RSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTN
VFEKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSD
DMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDL
FRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAISDVFTQYFESLSDVLLDDILAQLYW
CVQQDNEQLARSGTNCLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPHALLTWRPVGA
EGEQLTQSLSDKQLDSVSQKSVDIQSRSDDQHSINSADRAALENRRQSQYSTASGMYEDG
SRSRTPTKLQEQRLFSALLIKCVVQLELIQTIDNIVFFPATSRKEDAENFAAAQRDAVHA
ADVPVGTQDQGMYRYLTSEQLFKLLDCLLESHHFAKAFNSNNEQRTLLWKAGFKGKSKPN
LLKQETSSLACGLRILFRMYTDESRQDAWAEVQRRLLNVCSEAVVYFLALTSESHREAWT
NLLLLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFNIAQ
QPKPEAEPEPQLPHAEQEADAEVGEEAGEESQ
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagggcaaaaagacgaaaaacatgttcctcacccgggctttggagaagatcctg
gccgacaaggaggtgaagaaggcgcaccactcgcaactgcgcaaagcctgcgaggtggcg
ctggaggaaatcaaagaggagtcagagaaattaagcccacccagcggagaaggcaaatct
ggttccagcactttaccgccaatcaaatcaaagaccaacttcattgaagccgacaagtac
ttcttgccgtttgagctggcatgtcagtccaaatgtccccgcattgtcatcacgtcgctc
gactgtctacagaaactgatagcatacggccacctgaccggcagcgccccggacaacacg
gcccccggcaagaagctgatcgacaggatcatcgagactatctgcgcctgtttccaaggg
ccgcaaaccgacgaaggcgttcagctacagattattaaggctctgctgacagcggtaacc
tctcagcacatagaaatccacgagggcactgtcctgcaggccgttcgcacatgttacaac
atctacctggccagcaagaacctcatcaaccagaccacagcaaaggccacgctcacgcag
atgctcaacgtcatctttgcacgcatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagcaaagcagctggagaga
gagcggcaccggcagcactcgccagtcacccaacacactgagccagactcccctcagctc
cagactcacatccacccgccggccaagggttcaagccaggaggccaacgggcccgtcagc
cctccaacccccagcatcaacatcccatccaccccgtccaccccctcgacgccggcccca
gagggcagcagcaggtcggtgtctggggagcaggaggagcagggcgagcaggggcctcct
gtctacgagagccccgatccagaaaacggctctgagttctgtgtggctgaaaatgaacag
actgaggcggaccaagcgacggcagcagctcataatgcggcggctcagcagcatccagag
gcaggcgaggaagacgaggtggagaccccaaactatgaggagaaagcccaggaaatagtg
cagagtattctgcaggaggtcgtcaatactgtcgcaggagggcactgtctggaccctgcg
aacctctgctctgacaccaaggagtctgtcggcgagagtgagcccgccgagtcggagcca
gagccgggcgaagcggtgacagaaggcacccagatctccctggatgacgagggcaccctt
ggtagcgacagcgagcacgtccatgccaacgggatccccggcacgcctatttctgccagc
ttcaccccctcgctgcctgatgacagactgtctgtctcatccaatgacactcaggaatca
ggagcagcaccgggacaaccgccgggtgctaagttctcccacatcctccagaaagatgcc
ttcctcgtctttcgctcactctgcaagctgtcaatgaagccactgtccgatggaccaccg
gatcctaagtcccacgagctccgatcgaaggtcctgtccctccagctgctgctctccatc
ctgcagaacgccgggcccatcttcaagaccaacgagatgttcatcaacgccatcaagcag
tacctgtgcgtggccctgtccaagaacggcgtctcctccgtgccggaggttttcgaactt
tcactgtccatcttcctcacgctgctctcccatttcaagacgcacctcaagatgcaaatc
gaggttttcttcaaggagattttcctgtatattcttgagacatccacaagctcctatgac
cacaagtggatggtcatacaaaccctcaccagaatatgtgcagatgcccagagtgtggtg
gacatctacgtgaactatgattgtgatttgaatgctgctaacatatttgagcgtttggtc
aacgacctctcgaaaattgcacagggtcgcgggggccatgagctgggcacaacgccacta
caggagctgaccctgagaaagaaaggccttgaatgtctagtttccatcctgaaatgtatg
gtcgagtggagtaaagaccaatacgtcaaccccaactcccagacgagcctcggccaagag
aaaccaccagagcaggagagcacagagaccaaggctcctgagaccataaaccgctatggc
agcattaactctctggactccacagcctcatctggcattggcagctacagcacccagatg
tcaggtactgacaaccccgagcagtttgaggtcctcaaacagcaaaaggagatcatcgag
cagggcattgacctgttcaacaagaaaccaaagagaggcatccagtaccttcaagagcaa
ggcatgctgggtacaaccccagaggaccttgctcagttcttgcaccaggaagagagactt
gattcgacgcaagtgggagagttcctcggagataacgaccgtttcaataaagaggtgatg
tacgcctacgtcgatcaaatggacttccagggcaaagattttgtttctgctctgaggaca
ttcttggagggctttcggctccccggagaggcccagaagatcgacaggctcatggagaaa
ttcgccgcaagatatctggagtgcaatcaggggcaaaccctctttgccagtgctgacacc
gcatacgtgcttgcctattcaatcatcatgctgacgacagaccttcacagtccacaggtg
aagaataaaatgacaaaagagcaatacatcaagatgaaccgaggcatcaacgacagcaaa
gacctacctgaggaatatctctcggccatctacgacgagattgcggggaaaaagattgcc
atgaaggagacgaaggagctcacgatgaaatccaacaagcatagtgtggccagtgagaag
cagaggcgtctgctgtacaacgtggagatggagcagatggccaagacggcgaaagcactg
atggaggccgtcagtcacgtccaggctccgtttaccagcgccacacatctggagcacgtt
cggcccatgttcaagctggcatggacgcccttcctggcagccttcagcgtgggtcttcag
gactgtgacgacactgaggtggcctctctgtgtttggaaggcatccgatgtgccatcagg
atagcgtgcatcttttgcatacagttggagagggatgcgtacgtccaggcgctagccagg
ttcaccctgctgactgccagttctggcatctcggaaatgaagcagaagaacatcgacacc
atcaagaccctcatcactgtggcccacaccgatggcaactacctgggcaactcatggcat
gagatcatgaagtgcatcagtcagttggagcttgctcagctgatcggtacgggggtgaag
gcacggtacatctcagggacggtgcggagcaaagagggctttctcgcaagcaccaaggag
cagagcagcgatgagtacctgggtctagttggagggaccgtggaccgtaagcagatcgcc
agcattcaggaatccattggcgagaccagctctcagagtgtggtggtggctgtggacagg
atattcacaggttctaccagactggacggtaatgcaatagttgattttgtgcgctggctg
tgtgccgtgtccatggatgagctggcctcgcccacacacccacgtatgttcagcctgcag
aaaatagttgagatctcctactacaacatgggccgcatcaggctgcagtggtccaggatc
tgggaggttatcggagaccatttcaacaaggttggctgtaattccaatgaagatgtggca
attttcgcagtcgactctctcaggcaactgtccatgaaatttctggagaagggggagctg
gctaatttcagattccagaaagacttcctgaggccttttgagcacatcatgaaaaagaat
aggtcccccaccatcagagacatggtggtgcgctgtatagcccagatggtcaactcgcag
gcagcaaacatccgttcaggctggaagaatatcttctccgtcttccacctggctgcctcg
gaccaggacgagagcatcgtggaactggccttccagaccaccggccacatcgtcacgaat
gtatttgaaaagcactttgcggccaccatcgactccttccaggacgccgttaagtgtctg
tcagagtttgcctgtaatgcctccttcccagacaccagtatggaggccatccgcctcatc
cgacactgcgccaaatacgtctccgagaggccacaggccttcaaggactacaccagtgat
gacatgaatgtagcgcctgaggaccgtgtgtgggtgcggggatggttccccattctcttc
gagctctcctgcatcatcaacaggtgtaagctggatgtcaggaccagggggcttacggtg
atgtttgaagtgatgaagacctacggccacacctttgaaaaacactggtggcaagatctg
ttcagaatcgtcttcaggatctttgacaacatgaagctgcctgagcaacagactgagaaa
gccgagtggatgaccaccacctgcaaccatgcactttatgccatctccgatgtcttcacc
caatactttgagtccctcagtgacgtgctgctggacgacattctggctcagctctactgg
tgtgtgcagcaagataatgagcagcttgcccgttcaggcaccaactgtctggagaatgtg
gtcatcctgaacggagagaagttttcccccgagacctgggacaagacatgtaactgcatg
ctggacatcttcaagaccaccatcccgcacgcgctgttaacatggagaccagtgggagcc
gagggagaacagctaacacagagtttgtcagacaaacagttggactccgtttcccagaag
tccgtggacatccagtcccgctctgacgaccagcattccatcaacagtgccgacagggct
gccttggagaaccgtcggcagagtcagtacagcacagcctcaggcatgtatgaggacggc
tccaggagcaggaccccaacaaagctccaggagcagcgcctgttctccgctttgctgata
aagtgtgtcgtgcagctggagctcatccagacaattgataacatcgtgttttttcctgcc
accagtaggaaggaggacgctgagaactttgctgcagctcagcgggacgctgtacatgca
gcagacgtcccggtggggacccaggaccagggcatgtatcgctacctgacctctgagcag
ctgttcaagctgctggactgtctgcttgagtcccaccacttcgccaaagctttcaactcc
aacaatgagcagaggactttactgtggaaagcgggtttcaaaggaaagtcgaagcccaac
ctgttgaagcaggagaccagcagcctggcgtgtggcctgcgcatcctgtttcgcatgtac
acagatgagagccgccaagacgcctgggcagaggtccagagacgacttctcaatgtgtgc
agtgaggctgtagtgtacttcttggccctgacctcagagagccacagagaggcctggacc
aacctactgctgctcttcctcaccaaggtgctaaagatcagcgatgagaggttcaaggcc
catgcatccaggtactaccctctgctctgcgagatcatgcagtttgacctgatccccgag
ctgcgggcggttctacgaaagttctacctgcggatcggccttgtgttcaacattgcacag
cagccgaagcccgaagctgaacccgagcctcagctgccgcatgcagagcaagaagccgac
gcggaggtgggagaggaggccggggaggagtcccagtga
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